Ggra2301.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2301.t1
Unique NameGgra2301.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length705
Homology
BLAST of Ggra2301.t1 vs. uniprot
Match: A0A2V3J2D1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2D1_9FLOR)

HSP 1 Score: 617 bits (1590), Expect = 2.880e-210
Identity = 385/709 (54.30%), Postives = 472/709 (66.57%), Query Frame = 0
Query:   22 SALIAVVCGAHTELGKFVLRELLRCDNVTRVHALAELDPRSELRLTAAQAAKLVLHIESLESLERTISAHVPQSHLAFCTLGFKTKPPEMDAYQFHNYNVAIPKRFVQEMFRINVDRITILCTNKASSRMSSSTLQRNTPSAADYARHLQVEQRESLSQLKIPGVSVFKVPLMLTDLKDHFGVKGTAISPIDQIREKIVFKLGIGASNAVHVRDVAKAMVADALEKLDLQNEQPDLALIFKSHQTAFDELRPNDIIITANEARAAQRSRYVQMRASRRRSSNVSGYARYQSGEQVTGDKFSPSDLSQSAVPSXXXXXXXXXXXXXXXXXXSATPFPAQTPLSPSRFPRIEMEGHTAPTPRSSELQSPTPLAQHIPLYSSQMHTEHA---------SHPPQSATPSNHAYSERQQSLPPSQNTFQSPQDRAXXXXXTLTSPRPSTATRYFSHAVAKESFPEEPVPF-PAVASSVDALGRQLSRRLTVVHNNEQMPGTSSSPHRLPRRESAKEIRPPNYQTTDKVPRRKSTPVVSRKGKTSQSSKSPTSKPRSSP---------------SPAQHPFESDEAQTPTSKSSVAHSSRRRASRSSQQKYNSGRSAPTTSFHSAYYSGEDG-RRRSEVDSLRRTKTTHGRRRSSLPSASAIISQISLIASRILEATDRPSVKRYRQAYDPNYLPRGDPRRDRGRDRRDTNVTTI 704
            ++LIAVVCGAHT+LGKFVLRELLR  NV  +HA AE DPRSELRL+ A A +L LHI+SL+ LER I+ +V Q HLAFCT+G + KPP+M+ Y+F+NYNV++PKRF+  MFR+NVDRI +  T KASSR SS  +QR+T SA ++AR LQVEQRES+S+  +PG+S+FKVPL+LTDL D  GVKGTAISP DQIREK+VFKLGIGASNAVHVRDVAKAMVADALEKLDLQNE+PDLA IFKS QTAFDEL P DII  AN+ R AQRS +++MR  R    N+   A  QS +QV+  K++PS+LSQSAVPS        XXXXXXXX  S +P          +  + E+EG TAP   +S   +   L  H  +  S  H EH+         +H P  ++   H     Q S          P           TSP PS+A R  SH        E   P  PA+ S+V+ALG QL  RLT+VH+NE++PGTS+SP    RR SAK+        + KV +RKSTP + +K  T QSS+ P S                     SP QHPFESD+AQ P  + S A S R R SRSSQQ+Y+ GRS PTTSF+S+ Y  E+G RRRSEVDS+R +++ H +R  S+PSASAI+SQISLIA+RILEATDRPSVKRY+QAYDPNYLPR DPR    +DRR T+ T I
Sbjct:   29 TSLIAVVCGAHTQLGKFVLRELLRSPNVHEIHAFAEFDPRSELRLSPAHAHRLRLHIDSLDYLERNIATYVKQCHLAFCTIGLRYKPPDMNRYKFYNYNVSLPKRFLTIMFRMNVDRIALFSTKKASSRTSSVAMQRSTTSADNFARQLQVEQRESMSENPVPGISIFKVPLLLTDLMDQQGVKGTAISPFDQIREKVVFKLGIGASNAVHVRDVAKAMVADALEKLDLQNERPDLAFIFKSRQTAFDELYPADIINLANDTRDAQRSHFIEMRKRRSAPPNIPINAPRQSNDQVSEKKYTPSELSQSAVPSALPSNAPTXXXXXXXXAHSPSPT--------HQLQQTEIEGLTAPQVGASPQHAI--LHSHHSVSQSNSHPEHSKQHDHLTSFTHFPLPSSDKAHVEDSHQLSQAKEAAPLTMPGLVLQSPKKPSTSPTPSSAARRASHNNDSPEASETRRPQQPALTSTVEALGNQLGHRLTIVHDNERLPGTSTSPRPTSRRSSAKDFHTGTENGSAKVSQRKSTPQLRKKYST-QSSRIPNSXXXXXXXXXXXXXXXXXXXXXSPPQHPFESDDAQPPVGRYSDAQSLRSRPSRSSQQRYSGGRSMPTTSFYSSGYHPEEGVRRRSEVDSIRHSRSLHRKRSVSVPSASAIMSQISLIANRILEATDRPSVKRYQQAYDPNYLPRSDPRLRHAKDRRTTDATAI 726          
BLAST of Ggra2301.t1 vs. uniprot
Match: A0A2V3J2C5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2C5_9FLOR)

HSP 1 Score: 68.6 bits (166), Expect = 1.130e-9
Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 0
Query:   19 VTPSALIAVVCGAHTELGKFVLRELLRCDNVTRVHALAELDPRSELRLTAAQAAKLVLHIESLESLERTISAHVPQSHLAFCTLGFKTKPPE-MDAYQFHNYNVAIPKRFVQEMFRINVDRITILCTNKASS 149
            VT    IAVVCGAHT+LG+ + R LL+ D V RV A+A    R   +L+ +   K+  H      +++ +S  + ++  AFC      +  E MD   F   N   P +F+++MF + V  +TIL    A S
Sbjct:   11 VTGFPKIAVVCGAHTDLGRRLCRNLLQSDEVERVIAIAPERVRDLEKLSWSVERKMESHKADFGDMDKVLS-RIREADYAFCVTNTDKRAYEAMDRRSFRETNFTGPSQFIRKMFELGVLHLTILSHVNADS 141          
The following BLAST results are available for this feature:
BLAST of Ggra2301.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2D12.880e-21054.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2C51.130e-934.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 12..255
e-value: 9.3E-14
score: 53.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 673..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 684..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 494..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 618..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 494..645
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..616
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..349
NoneNo IPR availablePANTHERPTHR33683FAMILY NOT NAMEDcoord: 4..440
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 26..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:67412..69526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2301.t1Ggra2301.t1Gracilaria gracilis GNS1m malemRNAtig00000122_pilon 67412..69526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2301.t1 ID=Ggra2301.t1|Name=Ggra2301.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=705bp
MSEHPPSASNPLSSSTTVVTPSALIAVVCGAHTELGKFVLRELLRCDNVT
RVHALAELDPRSELRLTAAQAAKLVLHIESLESLERTISAHVPQSHLAFC
TLGFKTKPPEMDAYQFHNYNVAIPKRFVQEMFRINVDRITILCTNKASSR
MSSSTLQRNTPSAADYARHLQVEQRESLSQLKIPGVSVFKVPLMLTDLKD
HFGVKGTAISPIDQIREKIVFKLGIGASNAVHVRDVAKAMVADALEKLDL
QNEQPDLALIFKSHQTAFDELRPNDIIITANEARAAQRSRYVQMRASRRR
SSNVSGYARYQSGEQVTGDKFSPSDLSQSAVPSALPSNTPSASPSAVPSV
PSATPFPAQTPLSPSRFPRIEMEGHTAPTPRSSELQSPTPLAQHIPLYSS
QMHTEHASHPPQSATPSNHAYSERQQSLPPSQNTFQSPQDRAQGPKDTLT
SPRPSTATRYFSHAVAKESFPEEPVPFPAVASSVDALGRQLSRRLTVVHN
NEQMPGTSSSPHRLPRRESAKEIRPPNYQTTDKVPRRKSTPVVSRKGKTS
QSSKSPTSKPRSSPSPAQHPFESDEAQTPTSKSSVAHSSRRRASRSSQQK
YNSGRSAPTTSFHSAYYSGEDGRRRSEVDSLRRTKTTHGRRRSSLPSASA
IISQISLIASRILEATDRPSVKRYRQAYDPNYLPRGDPRRDRGRDRRDTN
VTTI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf