Ggra2296.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2296.t1
Unique NameGgra2296.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length193
Homology
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A2V3J2K1 (40S ribosomal protein S7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2K1_9FLOR)

HSP 1 Score: 353 bits (907), Expect = 6.370e-123
Identity = 183/192 (95.31%), Postives = 187/192 (97.40%), Query Frame = 0
Query:    1 MVLHKIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPITSE 192
            MVLHKIQKEKG +PEP EKNVAQALADLEASGSEIKAEL+ELFISAAKEVEC GGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREK+GSRLQKQKRPRSRTLTSVH+QILEDLVFPTEIV KRVRYKVDGSRLLRVFLDPKDQPNIEYKT TFQSVYKKLTGKDVVFEFPITSE
Sbjct:    1 MVLHKIQKEKGAEPEPFEKNVAQALADLEASGSEIKAELKELFISAAKEVECAGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKNGSRLQKQKRPRSRTLTSVHDQILEDLVFPTEIVAKRVRYKVDGSRLLRVFLDPKDQPNIEYKTQTFQSVYKKLTGKDVVFEFPITSE 192          
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A1X6NMK5 (40S ribosomal protein S7 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMK5_PORUM)

HSP 1 Score: 257 bits (656), Expect = 1.210e-84
Identity = 130/191 (68.06%), Postives = 155/191 (81.15%), Query Frame = 0
Query:    2 VLHKIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPITSE 192
            V +KI K KG     LE+ +AQAL DLEAS +E+K ELREL IS AKE++  GGK+A+V+FVPYRLL K+HK+QTRLVRELEKKFSGK ++I+AQRRI P E+ G RL  QKRPRSRTLT+VHE +LEDLVFPT+IVG+R RYK DGSRLL+V LDPK+Q N E+KT TF +VYKKLTGK+V FEFP   E
Sbjct:    4 VNYKISKAKGQSVTELEERIAQALIDLEASSTELKPELRELSISGAKEIDLEGGKSAIVVFVPYRLLTKYHKVQTRLVRELEKKFSGKHMVILAQRRIFPSERKGGRLAPQKRPRSRTLTAVHEGLLEDLVFPTDIVGQRTRYKTDGSRLLKVHLDPKEQTNSEHKTETFSAVYKKLTGKEVTFEFPTVPE 194          
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A7S0ZGR5 (40S ribosomal protein S7 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGR5_9RHOD)

HSP 1 Score: 249 bits (635), Expect = 1.780e-81
Identity = 129/188 (68.62%), Postives = 149/188 (79.26%), Query Frame = 0
Query:    5 KIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPITSE 192
            K++KE+G   + LE  VAQAL DLE S +E+KAEL+ L   AAKEV+  GGK  +VIFVP  +L K+HKIQTRLVRELEKKFSGK V+IVAQR+I+PREK G R  KQKRP SRTLT+VHE IL+DLVFPTEIVGKR RY VDGSR L+V LD KDQ N EYK   F++VYKKLTGKDVVFEFP+  E
Sbjct:    6 KLKKEEGASADALELTVAQALFDLEQSSTELKAELKALSFCAAKEVDIAGGKKVIVIFVPCPMLTKYHKIQTRLVRELEKKFSGKQVVIVAQRKIIPREKKGLRQHKQKRPHSRTLTAVHEAILDDLVFPTEIVGKRTRYLVDGSRQLKVHLDHKDQQNAEYKVEAFEAVYKKLTGKDVVFEFPVVQE 193          
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A7S4KJT0 (40S ribosomal protein S7 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4KJT0_9EUKA)

HSP 1 Score: 247 bits (630), Expect = 2.060e-80
Identity = 121/188 (64.36%), Postives = 156/188 (82.98%), Query Frame = 0
Query:    5 KIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPITSE 192
            KI K+KG +PEP E +VAQA  DLEA+ +++KAELREL+I +AKEV+C G K AV++ VP++LL+  HKIQ+RLVRELEKKFSGK V+I+ QRRI+ +  +G R  KQKRPRSRTLT+VHE ILEDLV+PTEIVGK  RY++DGS++++V+LDPK+ PN+EYK  TF SVYKKLTGK+V FEFP+  +
Sbjct:   27 KIIKDKGAEPEPFEIDVAQAFCDLEANSNDLKAELRELYIVSAKEVQCAGRKAAVIV-VPFKLLKVVHKIQSRLVRELEKKFSGKHVVIIGQRRIMRKPSAGQRQPKQKRPRSRTLTAVHEAILEDLVYPTEIVGKHTRYRLDGSKMIKVYLDPKEAPNVEYKVETFASVYKKLTGKEVKFEFPVQEQ 213          
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A7S0BFP0 (40S ribosomal protein S7 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFP0_9RHOD)

HSP 1 Score: 245 bits (626), Expect = 4.290e-80
Identity = 125/190 (65.79%), Postives = 156/190 (82.11%), Query Frame = 0
Query:    2 VLHKIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPITS 191
            V HKI KE G +P+ LE+ VA A+ +LE S +E   +LRE+FI+ AKE++  G K AVV+FVP+RLLQK HKIQ+RLVRELEKKFSGK VI+VA RRI+ RE++G RL  QKRPR+RTLTSVH+  LED+V+PTEIVG+R R+K+DG RL +V LDPK++ N+E+KT TFQSVYKKLTGKDVVFEFP+ S
Sbjct:    4 VRHKIHKENGAEPDILEEAVAHAMIELEESSAESWEDLREIFITGAKEIDV-GSKKAVVVFVPFRLLQKVHKIQSRLVRELEKKFSGKHVIVVATRRIMRRERAGKRLLAQKRPRNRTLTSVHQATLEDIVYPTEIVGQRTRFKMDGGRLYKVHLDPKEKQNVEHKTETFQSVYKKLTGKDVVFEFPVLS 192          
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A3B4X9N2 (40S ribosomal protein S7 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A3B4X9N2_SERLL)

HSP 1 Score: 244 bits (622), Expect = 1.630e-79
Identity = 124/184 (67.39%), Postives = 153/184 (83.15%), Query Frame = 0
Query:    5 KIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFP 188
            KI KEK V PEP E +VAQAL DLEA+ +++KAELREL+I +AKEV+  G K AVVIFVP++LL+  HKIQ+RLVRELEKKFSGK V+I+ QRRI+ +  SG R  KQKRPRSRTLT+VHE +LEDLVFPTEIVGK  RY++DGS++++V+LDPK+  N+EYK  TF +VYKKLTGK+V FEFP
Sbjct:    6 KIVKEKDVPPEPFEMDVAQALCDLEANSNDLKAELRELYIVSAKEVDVTGRK-AVVIFVPFKLLKVVHKIQSRLVRELEKKFSGKHVVIIGQRRIMRKPSSGQRQPKQKRPRSRTLTAVHEAVLEDLVFPTEIVGKHTRYRLDGSKIIKVYLDPKEAANVEYKVDTFSTVYKKLTGKEVKFEFP 188          
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A061RJF7 (40S ribosomal protein S7 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RJF7_9CHLO)

HSP 1 Score: 235 bits (600), Expect = 3.610e-76
Identity = 118/185 (63.78%), Postives = 153/185 (82.70%), Query Frame = 0
Query:    5 KIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPI 189
            KI KEKG +P+  E++VAQAL DLEA+ SE+K+EL++L+I++A+EV+  G + A++I VPYRLL+ FHKIQ RL+RELEKKFSGK V++VA RRILP  K+G     + RPRSRTLT+VH+ ILEDLV+PTEIVGKR+RYK+DGS++L+V+LDPK++   EYK  TF  VYKKLTGKDV FEFP+
Sbjct:    7 KIIKEKGQEPDSFEESVAQALFDLEANNSELKSELKDLYITSAREVDVSGSRKAIIIHVPYRLLKAFHKIQHRLIRELEKKFSGKDVVVVAARRILPPAKNGM---DKARPRSRTLTAVHDAILEDLVYPTEIVGKRIRYKLDGSKVLKVYLDPKERNATEYKLETFGGVYKKLTGKDVSFEFPV 188          
BLAST of Ggra2296.t1 vs. uniprot
Match: A0A5J4XZI7 (40S ribosomal protein S7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZI7_9CHLO)

HSP 1 Score: 234 bits (598), Expect = 7.040e-76
Identity = 119/185 (64.32%), Postives = 150/185 (81.08%), Query Frame = 0
Query:    5 KIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPI 189
            KI KEKG +P+  E+ VAQAL DLEA+  + K +LR+L+I++A++++    K A++I VPYRLL+ F KIQ RLVRELEKKFSGK V++VA RRI+P+ KSGS    + RPRSRTLTSVH+ IL DLV+PTEIVGKRVRYK+DGSR L+V+LDPKD+ + E+K  TF+ VYKKLTGKDVVFEFPI
Sbjct:    7 KIAKEKGQEPDSFEEQVAQALFDLEATNQDFKTDLRDLYITSAQQIDVTPSKNAIIIHVPYRLLKGFQKIQQRLVRELEKKFSGKDVVLVANRRIMPKTKSGS---SKARPRSRTLTSVHDAILADLVYPTEIVGKRVRYKMDGSRTLKVYLDPKDRNSTEWKVETFKGVYKKLTGKDVVFEFPI 188          
BLAST of Ggra2296.t1 vs. uniprot
Match: A9S5I8 (40S ribosomal protein S7 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9S5I8_PHYPA)

HSP 1 Score: 234 bits (597), Expect = 1.140e-75
Identity = 120/185 (64.86%), Postives = 151/185 (81.62%), Query Frame = 0
Query:    5 KIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPI 189
            KIQKEKG +P+  E++VAQAL DLE++ SE+K+ELR+LFI++AKEV+  G + AVVI VPYRL + F KI  RLVRELEKKFSGK VI++A RRIL   K GS +    RPRSRTLT+VHE +LEDLV+P+EIVGKRVRY++DGSR++RV+LDPK++ + EYK  TF  VYKKLTGK+V FE+PI
Sbjct:    8 KIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAVVIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVN---RPRSRTLTAVHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNSTEYKLETFAGVYKKLTGKEVTFEYPI 189          
BLAST of Ggra2296.t1 vs. uniprot
Match: L1IQ16 (40S ribosomal protein S7 n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1IQ16_GUITC)

HSP 1 Score: 231 bits (590), Expect = 1.280e-74
Identity = 116/187 (62.03%), Postives = 151/187 (80.75%), Query Frame = 0
Query:    5 KIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEVECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRILPREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSRLLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPITS 191
            KI KE    P+  E+ VAQA+ DL+   +++K++L++LFI++AKEVE   G+ A++I VP+RLL+ FH+IQ RL+RELEKKFSGK V ++AQRRILPRE   +R QKQKRP SRTLTSVHE  LEDLV+PTEIVGKR R ++DGS+LL+V+LDPKD+ N+E+K  TF+ VYKKLTG+D VFEFP+ S
Sbjct:    7 KIVKEGDAQPDSFEEQVAQAIFDLQVQ-TDMKSDLQDLFITSAKEVEVSNGRKAIIIHVPFRLLKSFHRIQQRLIRELEKKFSGKHVTVIAQRRILPREGRKNRTQKQKRPFSRTLTSVHECTLEDLVYPTEIVGKRTRVRMDGSKLLKVYLDPKDKNNVEHKLETFEKVYKKLTGRDAVFEFPVNS 192          
The following BLAST results are available for this feature:
BLAST of Ggra2296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2K16.370e-12395.3140S ribosomal protein S7 n=1 Tax=Gracilariopsis ch... [more]
A0A1X6NMK51.210e-8468.0640S ribosomal protein S7 n=1 Tax=Porphyra umbilica... [more]
A0A7S0ZGR51.780e-8168.6240S ribosomal protein S7 n=1 Tax=Timspurckia oligo... [more]
A0A7S4KJT02.060e-8064.3640S ribosomal protein S7 n=1 Tax=Prymnesium polyle... [more]
A0A7S0BFP04.290e-8065.7940S ribosomal protein S7 n=1 Tax=Rhodosorus marinu... [more]
A0A3B4X9N21.630e-7967.3940S ribosomal protein S7 n=3 Tax=Eukaryota TaxID=2... [more]
A0A061RJF73.610e-7663.7840S ribosomal protein S7 n=1 Tax=Tetraselmis sp. G... [more]
A0A5J4XZI77.040e-7664.3240S ribosomal protein S7 n=1 Tax=Trebouxia sp. A1-... [more]
A9S5I81.140e-7564.8640S ribosomal protein S7 n=2 Tax=Physcomitrium pat... [more]
L1IQ161.280e-7462.0340S ribosomal protein S7 n=3 Tax=Geminigeraceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000554Ribosomal protein S7ePFAMPF01251Ribosomal_S7ecoord: 5..187
e-value: 4.4E-82
score: 274.2
IPR000554Ribosomal protein S7ePANTHERPTHR1127840S RIBOSOMAL PROTEIN S7coord: 4..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:55631..56209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2296.t1Ggra2296.t1Gracilaria gracilis GNS1m malemRNAtig00000122_pilon 55631..56209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2296.t1 ID=Ggra2296.t1|Name=Ggra2296.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=193bp
MVLHKIQKEKGVDPEPLEKNVAQALADLEASGSEIKAELRELFISAAKEV
ECPGGKTAVVIFVPYRLLQKFHKIQTRLVRELEKKFSGKPVIIVAQRRIL
PREKSGSRLQKQKRPRSRTLTSVHEQILEDLVFPTEIVGKRVRYKVDGSR
LLRVFLDPKDQPNIEYKTATFQSVYKKLTGKDVVFEFPITSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000554Ribosomal_S7e