Ggra2260.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra2260.t1 vs. uniprot
Match: A0A2V3IYD2 (AT-rich interactive domain-containing protein cfi-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD2_9FLOR) HSP 1 Score: 272 bits (695), Expect = 2.940e-85 Identity = 133/183 (72.68%), Postives = 153/183 (83.61%), Query Frame = 0
Query: 12 SPP----SRSDDRDGRVQLAPGDYSGNLPVDIVNMPVVPCPLIKLGNRVIICGRYPDHHTCVKAANNLGAVMLSDTFADHLPPHTTCTEDRFLADWRAFHFEIYGLVPKLPTVSGSQLDLFLFAQQILLLGGIDTVIEKRGFVVLAKQLRLSKPCTSAATVLRRAHQSLMHEYEKKLMQISAA 190
SPP SR D V+LAPGDYSG LPVDI+ MPVVPCPLIKLGNRVIICGRY D+ CVKAAN+LG +MLS T+ + PP D F+ADW+AFH+E+YGLVP+LPTVSGS+LDLFLFA+Q+LLLGGIDTVIEKRGFVVLAKQL LSKPCTSAA VLRRAHQSLMH+YE++L+Q+S A
Sbjct: 36 SPPPTTVSRRFPADDHVELAPGDYSGKLPVDIMTMPVVPCPLIKLGNRVIICGRYSDNEPCVKAANSLGVLMLSSTYTNCKPPAAITRRDSFIADWKAFHYEMYGLVPRLPTVSGSKLDLFLFAEQVLLLGGIDTVIEKRGFVVLAKQLCLSKPCTSAAVVLRRAHQSLMHQYEQRLIQLSTA 218
BLAST of Ggra2260.t1 vs. uniprot
Match: A0A2V3J2X0 (AT-rich interactive domain-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2X0_9FLOR) HSP 1 Score: 131 bits (330), Expect = 3.270e-30 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0
Query: 37 VDIVNMPVVPCPLIKLGNRVIICGRYPDHHTCVKAANNLGAVMLSDTFADHLPPHTTCTED-----RFLADWRAFHFEIYGLVPKLPTVSGSQLDLFLFAQQILLLGGIDTVIEKRGFVVLAKQLRLSKPCTSAATVLRRAHQSLMHEYEKKLMQISAAQE 192
VDI+++ VV PL K G IICGR PD++ AA LG M+S + TC + FL DW+AFH E+ G VPK P + G +LD+F A ++LLLGG+ V++KR F V+A+QL L K CTSAA+VL+ A++ L+ YE KL+ Q+
Sbjct: 229 VDILSLDVVDSPLQKDGRHTIICGRLPDNNPYAIAARGLGQKMVSKKHSGF----QTCEVESERRLNFLKDWKAFHEELLGYVPKRPVIGGGELDIFSLAHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYERLLFYYEGKLVHDRMPQD 385
BLAST of Ggra2260.t1 vs. uniprot
Match: A0A1X6PJV0 (ARID domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJV0_PORUM) HSP 1 Score: 86.3 bits (212), Expect = 8.490e-15 Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 0
Query: 48 PLIKLGNRVIICGRYPDHHTCVKAANNLGAVMLSDTFAD---HLPPHTTCT-----------EDRFLADWRAFHFEIYGLVPKLPTVSGSQLDLFLFAQQILLLGGIDTVIEKRGFVVLAKQLRLSKPCTSAATVLRRAHQSLMHEYEKKLM 185
PL K G ++I GR P +A +++G +S + PP E FLAD AF FE K+P V G L++F ++ LGG++ V+ KR F V+A +L L + CTSAA VLR AH+SL++ YE+KL+
Sbjct: 532 PLRKEGRNLVITGRLPTSSPYQQALDSVGIRFVSAKLSGIGPGAPPXXXXXXXXXXXGVGGREAAFLADHAAFMFERGQASFKVPVVGGGPLNIFRLFVEVCKLGGVENVLNKRAFRVVAGELDLPRTCTSAAFVLRNAHESLLYAYEQKLV 683 The following BLAST results are available for this feature:
BLAST of Ggra2260.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra2260.t1 ID=Ggra2260.t1|Name=Ggra2260.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=336bpback to top |