Ggra2255.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2255.t1
Unique NameGgra2255.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length467
Homology
BLAST of Ggra2255.t1 vs. uniprot
Match: A0A2V3IYD1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD1_9FLOR)

HSP 1 Score: 430 bits (1106), Expect = 3.960e-144
Identity = 228/443 (51.47%), Postives = 301/443 (67.95%), Query Frame = 0
Query:    7 SKNRTILTAIPLPPSDFINISRENQKPGQYVFGQNSFVPDTSLSNSGLLSKQLDGATEEIILGFLSIIMIMAITEVVLTILSSQRQNQEPERNELAHLAIKVDGLLHFNGKWMVSRENCAS--SRRREKEIMMAVFAVLLATVIFVMDMGAVVLTQPQDYPSKQYAYNLRGSHPIGTTLGLGKFLRRTARERPCITPVFSASNPFRNFSISACHTLNLEIAHNKFNDSVKSVKISSLFHHGGSDHLISFGNASIEIKTRAVVYGANGGTRRLLFPGLHENYMGFTYYLHQVVIYMILEESCNSKHSTKTCEELVSEHRSVAEPVNRTIGLWTTRTGKVKREVHGLETTLTAEITKPWLTVYKSVGPLMTAELIEEIEGRGLYSGIATEIEEEGIPGLLVQQRRPLGVFGMLLGTVSLVLVLFGLKRILRPVYLADRAWENFER 447
            S+NRTILT IP  P  F+ +  E+Q PGQYV GQ+SF  +  +    LL + + G+ EE +LG LSI MIM +TE++LT LS +R + + E NE A+ A++VD  L  N +  + RE       +RR+  + + VFAV    VI ++D G + LTQP    SK   YNL+G+HPI  + GLGKFLRRTA ERPC+TP+FS SNP RNFS+SAC TL LE AH +  D+V ++K  S FH GG DH+I+FGNASI +KTR  +YG   GTRR+LF  L+E+Y+    YLH++V+Y I+EESCN+ ++T+TC+E++ EHRS + PVNRT+ LWTTR GK +  V GLET L  EI KPW+TV+K VGPL+T E + E+EG G YS I TE  +E I GLLVQ+ R LGV GMLL    LV  L   +R  RPV L+ +AW+ FE+
Sbjct:    2 SENRTILTTIPEAPYGFVEVLPESQVPGQYVVGQSSFTGNPDIKKPFLLIRNVGGSAEEFMLGLLSIFMIMVVTELLLTFLSRKRSDIDDEENEYAYAAVRVDEYLRLNMERALRREGWPRRVGQRRKVHLTVTVFAV--GAVILLIDTGTIFLTQPSISVSKPGDYNLKGTHPIAASPGLGKFLRRTAIERPCVTPIFSNSNPLRNFSMSACTTLGLEQAHTRVTDTVNTIKFGSWFHEGGGDHIITFGNASITMKTRLFLYGVENGTRRILFSMLYEDYLPAIRYLHELVMYGIMEESCNANYATRTCDEVLKEHRSESTPVNRTLVLWTTRKGKRRESVLGLETNLFLEIRKPWVTVFKRVGPLLTTEQVTEVEGPGSYSHINTEERQENIRGLLVQESRNLGVIGMLLADSVLVAFLVCARRYCRPVSLSQKAWDLFEK 442          
BLAST of Ggra2255.t1 vs. uniprot
Match: A0A2V3IZE0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZE0_9FLOR)

HSP 1 Score: 383 bits (984), Expect = 2.730e-126
Identity = 199/437 (45.54%), Postives = 291/437 (66.59%), Query Frame = 0
Query:    8 KNRTILTAIPLPPSDFINISRENQKPGQYVFGQNSFVPDTSLSNSGLLSKQLDG-ATEEIILGFLSIIMIMAITEVVLTILSSQRQNQEPERNELAHLAIKVDGLLHFNGKWMVSRENCASSRRREKEIMMAVFAVLLATVIFVMDMGAVVLTQPQDYPSKQYAYNLRGSHPIGTTLGLGKFLRRTARERPCITPVFSASNPFRNFSISACHTLNLEIAHNKFNDSVKSVKISSLFHHGGSDHLISFGNASIEIKTRAVVYGANGGTRRLLFPGLHENYMGFTYYLHQVVIYMILEESCNSKHSTKTCEELVSEHRSVAEPVNRTIGLWTTRTGKVKREVHGLETTLTAEITKPWLTVYKSVGPLMTAELIEEIEGRGLYSGIATEIEEEGIPGLLVQQRRPLGVFGMLLGTVSLVLVLFGLKRILRPVYLADRAWE 443
            KN T+LT IP PP  F+ +  E+Q PGQYV GQ+SF  +  ++    L +++ G A E  ++G LS  MI  IT++VLT LS +R   + E NE A+ A++VD  L  + +  + R+       R+K+  +    ++++ VIF++D+  ++LTQP+   SK   YNL+G+HPI      G+  R+T  E PCITPVFS+SNP RNFSISAC    LE AH +  D+V +++I S FH GG DH+++FGNA+I IKTR  +YG   GTRR+LF  L+E+Y+    YLH++V+Y I+EESC +K++T+TC+E++ EHRS + P NRT+ LWTTR GK K  V GLE+ L  EI++PW TV+++VGPL+T E + E++G G YS I+TE  E+ + GLLVQ+ R LG+FG++L    L   L    ++ RPV+L+ +AW+
Sbjct:    3 KNGTVLTTIPEPPPKFVQVLPESQLPGQYVIGQSSFTSNPDINRPFFLVQKVGGSAAEAFVVGLLSTWMITVITKLVLTCLSRERSIDD-EENEYAYAAVRVDEFLRKSRREALRRKGWPRGVYRKKKACLIQMVLVISVVIFLIDICTIILTQPRISVSKPGDYNLKGTHPIAADREEGEEFRKTVIETPCITPVFSSSNPSRNFSISACTIFGLEEAHTRVTDTVNTIRIGSWFHEGGGDHIVTFGNATIRIKTRLFLYGVENGTRRILFSMLYEDYLPAIKYLHELVMYGIMEESCTAKYATRTCDEVLKEHRSESTPANRTVVLWTTRKGKRKETVVGLESNLFLEISQPWATVFRNVGPLLTGEQVTEVDGPGSYSHISTENREQNLHGLLVQETRYLGMFGLILADSVLSAFLICATKLCRPVFLSHKAWD 438          
BLAST of Ggra2255.t1 vs. uniprot
Match: A0A2V3IY15 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY15_9FLOR)

HSP 1 Score: 339 bits (869), Expect = 2.940e-108
Identity = 181/381 (47.51%), Postives = 250/381 (65.62%), Query Frame = 0
Query:   84 LTILSSQRQNQEPERNELAHLAIKVDGLLHFNGKWMVSRENCASSRRREKEIMMAVFAVLLATVIFVMDMGAVVLTQPQDYPSKQYAYNLRGSHPIGTTLGLGKFLRRTARERPCITPVFSASNPFRNFSISACHTLNLEIAHNKFNDSVKSVKISSLFHHGGSDHLISFGNASIEIKTRAVVYGANGGTRRLLFPGLHENYMGFTYYLHQVVIYMILEESCNSKHSTKTCEELVSEHRSVAEPVNRTIGLWTTRTGKVKREVHGLETTLTAEITKPWLTVYKSVGPLMTAELIEEIEGRGLYSGIATEIEEEGIPGLLVQQRRPLGVFGMLLGTVSLVLVLFGLKRILRPVYLADRAWENFERTVLNHLELEHRTSSGST 464
            LT LS +R   + E NE A+ A++VD  L  N +  + RE    S    ++  + V  + +  ++FVM+  A++ TQP+   SK   YNL+G+HPI    G  KFLRR  RERPCITPVFS+SNP RNFSISAC    LE AH +  D+V ++KI S FH GG DH+I+FGNA I IKT+ ++YG  GGTRRLLF  L+E+Y+    YLH++V+Y I+EE+C +K++T+TC+E++ EHRS + P NRT+ +WTTR  K K  V GLET L  EI KPW+TV+K VGPL+TAE + E++G G YS   T   E+ + GLLVQ+ R LGVFGM L  V L+ VL  L +  +P+ L+ +AW+ FE    +    E++ +  S+
Sbjct:    2 LTCLSHERSIDD-EENEYAYAAVRVDEFLQLNVERALRREGWPRSVEPRQKPYLLVTVLAMGILMFVMNAVAILCTQPRISVSKPGDYNLKGTHPIAAGHGNAKFLRRIGRERPCITPVFSSSNPSRNFSISACTIFGLEEAHTRDTDTVNTIKIGSWFHEGGGDHIITFGNARITIKTKLLLYGVAGGTRRLLFSMLYEDYLPAVRYLHELVMYGIMEETCTAKYATRTCDEVLKEHRSESTPTNRTVVVWTTRKEKRKETVVGLETNLFLEINKPWVTVFKRVGPLLTAEQVTEVKGPGCYSHTETGEREQNLHGLLVQETRFLGVFGMTLADVVLLGVLLCLTKFCQPLSLSQKAWDLFENRYTSDASTENKPADESS 381          
The following BLAST results are available for this feature:
BLAST of Ggra2255.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYD13.960e-14451.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IZE02.730e-12645.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IY152.940e-10847.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 429..466
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..408
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 409..428
NoneNo IPR availableTMHMMTMhelixcoord: 409..428
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 135..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:933171..934571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2255.t1Ggra2255.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 933171..934571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2255.t1 ID=Ggra2255.t1|Name=Ggra2255.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=467bp
MVGYLSSKNRTILTAIPLPPSDFINISRENQKPGQYVFGQNSFVPDTSLS
NSGLLSKQLDGATEEIILGFLSIIMIMAITEVVLTILSSQRQNQEPERNE
LAHLAIKVDGLLHFNGKWMVSRENCASSRRREKEIMMAVFAVLLATVIFV
MDMGAVVLTQPQDYPSKQYAYNLRGSHPIGTTLGLGKFLRRTARERPCIT
PVFSASNPFRNFSISACHTLNLEIAHNKFNDSVKSVKISSLFHHGGSDHL
ISFGNASIEIKTRAVVYGANGGTRRLLFPGLHENYMGFTYYLHQVVIYMI
LEESCNSKHSTKTCEELVSEHRSVAEPVNRTIGLWTTRTGKVKREVHGLE
TTLTAEITKPWLTVYKSVGPLMTAELIEEIEGRGLYSGIATEIEEEGIPG
LLVQQRRPLGVFGMLLGTVSLVLVLFGLKRILRPVYLADRAWENFERTVL
NHLELEHRTSSGSTIF*
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