Ggra2206.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra2206.t2
Unique Name	Ggra2206.t2
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	313

Homology

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BLAST of Ggra2206.t2 vs. uniprot
Match: A0A2V3IMR5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR5_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 8.060e-47
Identity = 119/244 (48.77%), Postives = 158/244 (64.75%), Query Frame = 0

Query:    1 LSSEINSLSDYQLKKLTRSNTKKNVGGKKNRFLSQLERVCRRLELLNVTPQVEPETQT-HSLHAIPIVNPDGSTFKSLTNKKEVSLQIN-ENEQHQGQHEEELEQLESDQFRIPIRTQTPRFCKD-APFSESTETHNSEDSATPEDITEDDDFDIEPATVGSTNDDAISTATTTKSLRSVRISTEVTILGFSPRSKRGEPMSLSVSTMRRTEHPTRNGKSFLLRPRSTKENRFPCAMSALDRAK 241
            LSSEI+SLS+ QLK+LTRSNT++N+G +++RF+SQLERVC+RL+L+N+TP+   +T     L A PIVNPDG TF +   K E    I+ E+E+ +G +            R+P    TPR   + A F     T++S+ S      +ED+DF IEPAT  S N+   +   +TKS RSVRIST VTIL + P++KRGEP+S SVST  RTEHPTRNGK   LR    ++N FP AMS+L R K
Sbjct:   16 LSSEIDSLSENQLKRLTRSNTRRNLGTRRSRFMSQLERVCQRLDLMNITPEFITKTPALPQLKATPIVNPDG-TFVTKIAKNEGGAAISPEDERQRGLN------------RVP----TPRVSSNCAAFFNDDSTNDSDYSELNAAPSEDEDFLIEPATDCSANE---ACTASTKSFRSVRISTTVTILDYCPKNKRGEPISFSVSTQHRTEHPTRNGKGLQLRRDLAEQNSFPRAMSSLGRLK 239

The following BLAST results are available for this feature:

BLAST of Ggra2206.t2 vs. uniprot

BLAST of Ggra2206.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMR5	8.060e-47	48.77	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..164

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000900_pilon	contig	tig00000900_pilon:649312..650250 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra2206.t2	Ggra2206.t2	Gracilaria gracilis GNS1m male	mRNA	tig00000900_pilon 649312..650250 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra2206.t2 ID=Ggra2206.t2|Name=Ggra2206.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=313bp
LSSEINSLSDYQLKKLTRSNTKKNVGGKKNRFLSQLERVCRRLELLNVTP
QVEPETQTHSLHAIPIVNPDGSTFKSLTNKKEVSLQINENEQHQGQHEEE
LEQLESDQFRIPIRTQTPRFCKDAPFSESTETHNSEDSATPEDITEDDDF
DIEPATVGSTNDDAISTATTTKSLRSVRISTEVTILGFSPRSKRGEPMSL
SVSTMRRTEHPTRNGKSFLLRPRSTKENRFPCAMSALDRAKRMEEIEALS
RDDTNSTPQRAMDKSSSGSSPVDRSNPVLLYAKGSPRRPQSRTNGRFLGG
SRKPEGIEAEKK*