Ggra2192.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2192.t1
Unique NameGgra2192.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length125
Homology
BLAST of Ggra2192.t1 vs. uniprot
Match: A0A2V3J066 (Histone H2B n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J066_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 1.440e-68
Identity = 112/121 (92.56%), Postives = 119/121 (98.35%), Query Frame = 0
Query:    4 KGKSVPVAEKKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
            KGKSVPVAEKKVAKKG++ G EK++RKKKR+ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKL+SYN+TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct:    4 KGKSVPVAEKKVAKKGISAGPEKSSRKKKRNESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLSSYNHTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124          
BLAST of Ggra2192.t1 vs. uniprot
Match: Q7XY84 (Histone H2B n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY84_GRIJA)

HSP 1 Score: 211 bits (536), Expect = 1.440e-68
Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0
Query:    1 MPPKGKSVPVAEKKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
            M PKGKSVP+AEKKVAKK + G TEK T+KKKRSESYSIYIYKVLKQVHP+TGISSKAMSIMNSFV DLFERIATEAAKLA+YNN+KTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct:    1 MAPKGKSVPIAEKKVAKKAVPGATEKVTKKKKRSESYSIYIYKVLKQVHPETGISSKAMSIMNSFVDDLFERIATEAAKLATYNNSKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124          
BLAST of Ggra2192.t1 vs. uniprot
Match: R7QDD7 (Histone H2B n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QDD7_CHOCR)

HSP 1 Score: 205 bits (522), Expect = 2.100e-66
Identity = 112/126 (88.89%), Postives = 120/126 (95.24%), Query Frame = 0
Query:    1 MPPKG-KSVPVAEKKVAKKGMAGGT-EKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
            M PKG K VP AEKK+AKKG++GG  EKTT++KKR+ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIA+E+AKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct:    1 MAPKGNKGVPTAEKKIAKKGVSGGAVEKTTKRKKRNESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIASESAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126          
BLAST of Ggra2192.t1 vs. uniprot
Match: M2VZY7 (Histone H2B n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZY7_GALSU)

HSP 1 Score: 174 bits (442), Expect = 2.700e-54
Identity = 99/124 (79.84%), Postives = 107/124 (86.29%), Query Frame = 0
Query:    1 MPPKG-KSVPVAEKKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS 123
            M PKG KSVPVA KK       G  EK   KKKR+ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFV D+FERIA+E++KLA+Y+ TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKY+S
Sbjct:    1 MAPKGSKSVPVAGKKPI-----GKAEKRKSKKKRAESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASESSKLAAYSKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS 119          
BLAST of Ggra2192.t1 vs. uniprot
Match: A0A7S0XIQ2 (Histone H2B n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIQ2_9RHOD)

HSP 1 Score: 171 bits (433), Expect = 2.050e-52
Identity = 97/125 (77.60%), Postives = 104/125 (83.20%), Query Frame = 0
Query:    1 MPPKG-KSVPVAEKKVAKKGMAGG-TEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS 123
            M PKG KS+P A          GG  +K +RKKKR ESYSIY+YKVLKQVHP+TGISSKAMSIMNSFV DLFERIA E+AKLA Y+ TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS
Sbjct:   32 MAPKGSKSLPAAXXXXXXXXXXGGDADKKSRKKKRVESYSIYVYKVLKQVHPETGISSKAMSIMNSFVNDLFERIAAESAKLAQYSKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS 156          
BLAST of Ggra2192.t1 vs. uniprot
Match: M2XSM4 (Histone H2B n=3 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSM4_GALSU)

HSP 1 Score: 169 bits (429), Expect = 2.580e-52
Identity = 96/125 (76.80%), Postives = 107/125 (85.60%), Query Frame = 0
Query:    1 MPPKG-KSVPVAEKKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
            M PKG KSVPVA KK   K      ++   KKKRSE+YSIYIYKVLKQVHPDTGIS KAMSIMNSFV D+FERIA+EA+KL++Y+ +KTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKY+SS
Sbjct:    1 MAPKGAKSVPVAGKKPIPK-----VDRKKSKKKRSETYSIYIYKVLKQVHPDTGISGKAMSIMNSFVNDIFERIASEASKLSAYSKSKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 120          
BLAST of Ggra2192.t1 vs. uniprot
Match: A0A5J4Z3W2 (Histone H2B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W2_PORPP)

HSP 1 Score: 168 bits (426), Expect = 8.380e-52
Identity = 98/125 (78.40%), Postives = 104/125 (83.20%), Query Frame = 0
Query:    1 MPPKG-KSVPVAEKKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
            M PKG KS+PVAEKK  K+ +            R+ESYSIYIYKVLKQVHPDTGISS AMSIMNSFV DLFERIA EAAKL+SY+ TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct:    1 MAPKGTKSLPVAEKK-PKQVIKXXXXXXXXXXXRTESYSIYIYKVLKQVHPDTGISSNAMSIMNSFVTDLFERIAAEAAKLSSYSKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124          
BLAST of Ggra2192.t1 vs. uniprot
Match: M1V980 (Histone H2B n=2 Tax=Cyanidiaceae TaxID=265316 RepID=M1V980_CYAM1)

HSP 1 Score: 167 bits (423), Expect = 1.990e-51
Identity = 91/112 (81.25%), Postives = 97/112 (86.61%), Query Frame = 0
Query:   13 KKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
            K VAKK          +K+KR E+YSIYIYKVLKQVHPDTGISSKAMSIMNSFV DLFERIA+EA+KLA YN TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKY+SS
Sbjct:    6 KTVAKKVAKAPASIDKKKRKRLETYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDLFERIASEASKLAQYNKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 117          
BLAST of Ggra2192.t1 vs. uniprot
Match: T1P3Z3 (Histone H2B (Fragment) n=2 Tax=Tigriopus TaxID=6831 RepID=T1P3Z3_TIGJA)

HSP 1 Score: 166 bits (420), Expect = 6.660e-51
Identity = 91/121 (75.21%), Postives = 99/121 (81.82%), Query Frame = 0
Query:    1 MPPKGKSVPVAEKKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKY 121
            MPPK  S   A K+V K    G T+K  R KKR ESY+IYIYKVLKQVHPDTGISSKAMSIMNSFV D+FERIA EA++LA YN   T+TSRE+QTAVRLLLPGELAKHAVSEGTKAVTKY
Sbjct:    1 MPPKNASSGKAVKRVDKASKMGNTDKK-RSKKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAGEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKY 120          
BLAST of Ggra2192.t1 vs. uniprot
Match: A0A6P5LMX2 (Histone H2B n=5 Tax=Theria TaxID=32525 RepID=A0A6P5LMX2_PHACI)

HSP 1 Score: 166 bits (420), Expect = 9.720e-51
Identity = 92/126 (73.02%), Postives = 105/126 (83.33%), Query Frame = 0
Query:    1 MPPKGKSVPVAEKKVAKKGMAGGTEKTTRKKKRS--ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
            MP  GKS P A KK +KK +    +K  +K+KRS  ESYS+Y+YKVLKQVHPDTGISSKAM IMNSFV D+FERIA+EA++LA YN   T+TSREIQTAVRLLLPGELAKHAVSEGTKAVTKY+SS
Sbjct:    1 MPEPGKSAP-APKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125          
The following BLAST results are available for this feature:
BLAST of Ggra2192.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0661.440e-6892.56Histone H2B n=2 Tax=Gracilariopsis chorda TaxID=44... [more]
Q7XY841.440e-6890.32Histone H2B n=1 Tax=Griffithsia japonica TaxID=832... [more]
R7QDD72.100e-6688.89Histone H2B n=2 Tax=Chondrus crispus TaxID=2769 Re... [more]
M2VZY72.700e-5479.84Histone H2B n=1 Tax=Galdieria sulphuraria TaxID=13... [more]
A0A7S0XIQ22.050e-5277.60Histone H2B n=2 Tax=Erythrolobus madagascarensis T... [more]
M2XSM42.580e-5276.80Histone H2B n=3 Tax=Galdieria sulphuraria TaxID=13... [more]
A0A5J4Z3W28.380e-5278.40Histone H2B n=1 Tax=Porphyridium purpureum TaxID=3... [more]
M1V9801.990e-5181.25Histone H2B n=2 Tax=Cyanidiaceae TaxID=265316 RepI... [more]
T1P3Z36.660e-5175.21Histone H2B (Fragment) n=2 Tax=Tigriopus TaxID=683... [more]
A0A6P5LMX29.720e-5173.02Histone H2B n=5 Tax=Theria TaxID=32525 RepID=A0A6P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 56..76
score: 77.41
coord: 108..121
score: 95.85
coord: 37..55
score: 87.67
coord: 78..95
score: 58.47
coord: 95..108
score: 94.9
IPR000558Histone H2BSMARTSM00427h2b3coord: 27..123
e-value: 8.7E-68
score: 241.2
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..124
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 92..114
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 9..100
e-value: 5.2E-21
score: 75.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..124
e-value: 1.1E-58
score: 198.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 16..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR23428:SF252HISTONE H2Bcoord: 1..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:601979..602353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2192.t1Ggra2192.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 601979..602353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2192.t1 ID=Ggra2192.t1|Name=Ggra2192.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=125bp
MPPKGKSVPVAEKKVAKKGMAGGTEKTTRKKKRSESYSIYIYKVLKQVHP
DTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRL
LLPGELAKHAVSEGTKAVTKYSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold