Ggra2165.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2165.t1
Unique NameGgra2165.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length650
Homology
BLAST of Ggra2165.t1 vs. uniprot
Match: A0A2V3J037 (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J037_9FLOR)

HSP 1 Score: 999 bits (2583), Expect = 0.000e+0
Identity = 482/650 (74.15%), Postives = 558/650 (85.85%), Query Frame = 0
Query:    1 MRGKGAFVSVGFNGRSESWLSPKVSRAQQICHQRARHITNAVLQQPKAKSQPRRTPSPGEPAHKYFEFSPEDIEAIRIRHCRLESKELCDYVWEQVTHRKARLEDLAASLSTCAASKRQGGDLGWWWKDEVVPESTEEFGINDQLLAAALRSRPNRIERTETKDGWHVFVVEETRHTLRTKHERTPSKKNPNRTREMG-SVNDISAPLPFTYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKVGPAY 649
            MR   AFV+  F    E++L  +   ++Q   +  R    AV+QQ +   +  R P PG P H++   SP+DIEAIRIRHCRLE+KELCD VW+Q+T  KARL D+AASLSTC ASK QGGDLGWWWK+E+VPE+ EEFGINDQLLAAALRSRP+ +ER +TK GWHVF+VEE RH LRTKHERT S++NPNR R +G +   +  PLP TYA+QTLGCQMN+SDSERMAGEL+R GYTETSDPF+AS+L+LNTCNIREHAESKVYSY+GRHVMRKR YP  VTLCVAGCVAQQEGEKMLRRIPELDLVFGPQY NRLGDLL+DVERNGCQ+AATDP HIQEDISKPKRES+V+AW++VIYGCGENCSFCTVGNVVR+VEQSR+M +IR+EIEEAARDG RE+VLLGQN+DAYGRDMYPKRT ++LL FIHD+DGI+RIRFTTSHPRYIS NLV+ CATLP++MP+FHIPPQSGDN +LK MRRGY+ EAYE+VV RIR+ IPDA ICGDMIVGFPGETEEQFQ+SL+LMDR+KFD MNTAAYSPRPQTPAA+M+NQVPDAVK DRL+RMN+VVK HALERSLRY+GR E VLVE +NPK+A+QVVGRTP NR VYF+GSI EL+GKIV V+I  AYPFSLKG++    Y
Sbjct:    1 MRLNTAFVAGSFCTPLETFLPQRNLCSRQTFSESGRKSIVAVIQQERTPRELNRVPRPGVPGHRFHNISPDDIEAIRIRHCRLETKELCDQVWKQITRDKARLADVAASLSTCNASKHQGGDLGWWWKEEIVPENVEEFGINDQLLAAALRSRPHTLERVQTKHGWHVFIVEEARHVLRTKHERTASRQNPNRKRGVGVNGEQVPRPLPHTYAVQTLGCQMNRSDSERMAGELNRLGYTETSDPFQASLLILNTCNIREHAESKVYSYVGRHVMRKRMYPNDVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYVNRLGDLLTDVERNGCQVAATDPTHIQEDISKPKRESSVSAWINVIYGCGENCSFCTVGNVVRSVEQSRSMESIRSEIEEAARDGYREIVLLGQNIDAYGRDMYPKRTFSQLLDFIHDIDGIERIRFTTSHPRYISQNLVDMCATLPRVMPFFHIPPQSGDNDVLKAMRRGYTVEAYEAVVKRIRKSIPDAAICGDMIVGFPGETEEQFQKSLELMDRVKFDVMNTAAYSPRPQTPAALMENQVPDAVKMDRLYRMNEVVKAHALERSLRYIGRTELVLVEHQNPKNARQVVGRTPTNRSVYFDGSIEELRGKIVSVEIEDAYPFSLKGRRPENPY 650          
BLAST of Ggra2165.t1 vs. uniprot
Match: R7QB29 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB29_CHOCR)

HSP 1 Score: 870 bits (2247), Expect = 9.140e-312
Identity = 421/628 (67.04%), Postives = 506/628 (80.57%), Query Frame = 0
Query:   24 VSRAQQICHQRARHITNAVLQQPKAKSQPRRTP--SPGEPAHKYFEFSPEDIEAIRIRHCRLESKELCDYVWEQVTHRKARLEDLAASLSTCAASKRQGGDLGWWWKDEVVPESTEEFGINDQLLAAALRSRPNRIERTETKDGWHVFVVEETRHTLRTKHERTPSKKNPNRTREMGSVNDISAPLPFTYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKVGPAY 649
            ++R+       A   T AVLQ+    S     P  + G P +++++ SP DIEA+RIRHCR++++EL   V+ ++  R+  L  +A  +STC+ASK  GGDLGWWW+DE +P   E+FG+N+QLL AALR+RPNR+E+ +T+DGWHVF+VEE RH +RTKHERTPS++  ++     +  +   P+  TYA+QTLGCQMN+SDSERMAGEL+R GY E  DPF+ASVLVLNTCNIR+HAE KVYSYIGRH  RKR+YP  VTL VAGCVAQQEGE+MLRRIPELDLVFGPQYANRLGDLL DVE N CQ+AATDPIHIQEDISKPKRESTVTAWV+V+YGCGENC+FCTVGNVVR+VEQSRT+ +IRAE+E+ AR GIREVVLLGQN+DAYGRDMYPK+T AELL  +HDVDGIDRIRFTTSHPRYIS NLV TCA LP +MPYFHIPPQSG++ +LKEM+RGY+ +A+++VV RIRE  PDA ICGDMIVGFPGETEEQFQ SL LM+ +KFD MNTAAYSPRP TPAA   NQ+ DA+KADRL RMN++V  HALERS+RYVGR+E VLVE+E+ K   +VVGRTP NR V F GS  EL+GKIVPVKI+ A PF+L G+  G  Y
Sbjct:   30 IARSSYSLSNSAHGGTRAVLQREDTISPRADIPKIASGLPGNRFYDISPNDIEAVRIRHCRVDTEELAKVVFRKIVAREESLAKMAKMVSTCSASKESGGDLGWWWQDEAIPADREQFGVNEQLLGAALRTRPNRLEQVKTEDGWHVFMVEEVRHVIRTKHERTPSRRKADKKDFKNTSAEALVPVAKTYAMQTLGCQMNRSDSERMAGELARIGYKEIDDPFKASVLVLNTCNIRDHAEKKVYSYIGRHAARKRKYPQDVTLAVAGCVAQQEGERMLRRIPELDLVFGPQYANRLGDLLKDVETNQCQVAATDPIHIQEDISKPKRESTVTAWVNVMYGCGENCTFCTVGNVVRSVEQSRTISSIRAEMEDIARSGIREVVLLGQNIDAYGRDMYPKKTFAELLRNVHDVDGIDRIRFTTSHPRYISRNLVTTCAELPNVMPYFHIPPQSGNDDVLKEMKRGYTVKAFKAVVNRIREATPDAAICGDMIVGFPGETEEQFQDSLKLMEDVKFDVMNTAAYSPRPNTPAAEYSNQISDAMKADRLARMNELVTRHALERSMRYVGRVEHVLVEQESSKTPGEVVGRTPTNRTVRFSGS-RELRGKIVPVKIVEALPFTLLGEIAGSPY 656          
BLAST of Ggra2165.t1 vs. uniprot
Match: A0A2V3IGB2 (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB2_9FLOR)

HSP 1 Score: 579 bits (1492), Expect = 3.160e-197
Identity = 300/602 (49.83%), Postives = 400/602 (66.45%), Query Frame = 0
Query:   46 PKAKSQPRRTPSPGEPAHKYFEFSPEDIEAIRIRHCRLESKELCDYVWEQVTHRKARLEDLAASLSTCAASKRQGGDLGWWWKDEVVPESTEEFG-INDQLLAAALRSRPNRIERTETKDGWHVFVVEETRHTLR-TKHERTPSKK---NPNRTREMGSVNDISAPLPFTYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKG 642
            P + +  RR PSP     ++++FS   + AIR+ HCR+ S+ +  ++   V  R+A L  +A  LS C  ++   GD GW        +S +    + D+ L  ALR+RP  ++  +   GW V++V + R +++ TK   T  K    NPN  R       I   +P ++ IQT GCQMN SDSER+A +L  +GY +  DP ++++ +LNTC +R+HAE KVYSY+G H  RK   P  V L VAGCVAQQEG+ +L R+PE+D+V GPQYANR+ D+L+    +  Q+ A DPIHI EDISKPKR S++TAWV++IYGC E C++C V N  R +EQSR M +IR EIE  A +G REVVLLGQNVDAYGRD+YPK TL+ELL +IHDVDGI+RIRFTT HPRYIS NL+NT   LPK+M +FH+PPQSGD+Q+LK M+RGYS E Y ++  RIRE +PDA IC D IVGFPGET++ FQ ++ L D + FD     AYS RP T AA   +QV + VK +RL  MN  ++E A +RS RY+GR  +VLVE  NPK + +V GR   NR V+ EG   EL GK++ V ++ AYPFSL+G
Sbjct:   62 PPSPAPVRRLPSPPP---RFYDFSNHHVHAIRLTHCRVLSEHMASFIHNAVKSRRAMLSQMATLLSVCDQTRLSAGDTGWISTAPHHSKSAQPSSPVPDEFLQVALRARPATLQFEQFSYGWEVYIVSDIRQSVQPTKLGATREKGYTVNPNMRRTSQKPPHI---IPHSFFIQTFGCQMNASDSERIAAQLESQGYHQIDDPNKSAIYMLNTCALRDHAEQKVYSYLGPHAQRKWDAPQQVMLIVAGCVAQQEGDALLSRVPEIDIVMGPQYANRITDVLNLYHTSKAQVVAVDPIHIHEDISKPKRSSSITAWVNIIYGCLERCTYCVVPNT-RGLEQSRPMSSIRREIEALAAEGYREVVLLGQNVDAYGRDLYPKATLSELLRYIHDVDGIERIRFTTGHPRYISENLINTVYELPKVMEHFHVPPQSGDSQVLKAMKRGYSRERYINIARRIREKMPDAAICADTIVGFPGETDDAFQNTVSLADEVVFDANMVRAYSARPNTIAASRPDQVNEEVKMERLAIMNKKMREQAEQRSRRYLGRTVEVLVEGMNPKRSNEVSGRERTNRIVFCEGG-TELIGKLIEVTVLEAYPFSLRG 655          
BLAST of Ggra2165.t1 vs. uniprot
Match: R7QN23 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN23_CHOCR)

HSP 1 Score: 573 bits (1477), Expect = 2.900e-196
Identity = 297/579 (51.30%), Postives = 390/579 (67.36%), Query Frame = 0
Query:   92 VWEQVTHRKARLEDLAASLSTCAASKRQGGDLGWWW------------KDEV--VPESTEEFGINDQLLAAALRSRPNRIERTETKDGWHVFVVEETRH----TLRTKHERTPSKKNPNRTREMGS---VNDISAPLPFTYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKVGPAY 649
            V  QV  +++ L +L++ LS C  SK + GD GW               DE   + +  +   ++ +LL AA+ +RP  ++  +   GW VFVVE+ RH    TLR           PN  R       ++D+S      Y IQT GCQMN SDSERMA EL R+GY  T DP ++++ +LNTC +R+HAE KVYSY+G H  RK   P+ VTL VAGCVAQQEG+K+L R+PE+D+V GPQYANR+G++L D   N  QI A DPIHIQED SKP R S +TAWV++IYGC E CS+C V N  R +EQSRTM +IRAE++  ARDG REVVLLGQNVDAYGRD+YPKRT ++LL FIHDVDGI+R+RFTT HPRYIS NL+ T A LPK+M +FH+PPQSGDN +LKEM RGY+ E Y  +  R+R+ +PDA IC D IVGFPGE+EE F+ ++D++ ++ FD     AYS RP T A + ++QV + VKA RL  MN +++E A +RS RY+GR  +VLVE  N K   +V+GR  +NR V+FEG+  E  GKI  V++  A+ FSL+G+ +G A+
Sbjct:    2 VTRQVRAKESSLAELSSLLSVCDTSKSKSGDTGWVQVPNPNMTVRNALADEAQHLDDLVKSVAMHPELLHAAMAARPGALQTVQLSYGWEVFVVEDVRHAVVPTLRGARRGPGFPVTPNMRRTSPKKPVIDDMS------YYIQTFGCQMNVSDSERMAAELERKGYHATDDPKKSALYLLNTCALRDHAEQKVYSYLGPHAQRKWDAPSEVTLVVAGCVAQQEGDKLLSRVPEVDIVMGPQYANRIGEVLDDFAENMMQIVAVDPIHIQEDFSKPVRSSKITAWVNIIYGCLEKCSYCVVPNT-RGLEQSRTMESIRAELQGLARDGYREVVLLGQNVDAYGRDLYPKRTFSDLLRFIHDVDGIERVRFTTGHPRYISENLITTVAELPKVMEHFHVPPQSGDNGVLKEMGRGYTRERYMDIARRVRKRMPDASICADTIVGFPGESEEAFENTVDMVKQVVFDSNMVRAYSARPNTTAGLREDQVEEEVKARRLAVMNRLMREQAEKRSQRYLGRRVEVLVEGVNEKVDGEVMGRERSNRVVFFEGAAEEYVGKIAVVEVDEAFAFSLRGRVIGEAW 573          
BLAST of Ggra2165.t1 vs. uniprot
Match: A0A7S0ZI68 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI68_9RHOD)

HSP 1 Score: 561 bits (1445), Expect = 4.780e-190
Identity = 291/600 (48.50%), Postives = 395/600 (65.83%), Query Frame = 0
Query:   64 KYFEFSPEDIEAIRIRHCRLESKELCDYVWEQVTHRKARLEDLAASLSTCAASKRQGGDLGW-----------WWKDEVVPESTEEF--GINDQLLAAALRSRPNRIER--TETKDGWHVFVVEETRHTLRTKHERTPSKKNPNRTREMGSVNDISAPLPF---TYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKV 645
            +++ F P +IE I     +L S+ L DY+ + +    +    LA  LS C  +K   G  GW           +  D   P+  +     I   LL  A ++RP  + +  +E+   W+VF+V +  H L   H  T SK         GS + +   L F   +Y I+T+GCQ N SDSERMA  L   G+    DP  A ++VLNTC IREHAE KVY ++G H +RK+R  + V L V+GCVAQQEGE +LR++PELD++ GPQYANRLG+L+  VE NG QI AT+PIH+ ED+S P R S VTAWV+VIYGC E C++C V +  R +EQSR+M +IR EI +AA  G++E+VLLGQN+DAYGRD+ PK T  +LL +IHDV+GI RIRF TSHPRY+S+ L++ CA L K+  +FH+P QSG ++IL++M RGY+++ Y  ++  IR+ +P AGI GD IVGFP E+EEQF+ +LDLM  + FD +NTAAYSPRP TPAA+MKNQVP+ +K +RL R+N +VK+ A ERS RY+G IE+VLVE  NPK+  QV GRT  NR V+F+G ++EL G +V V+I   + F L G+ V
Sbjct:   67 RFYTFEPSNIEYINFSCIQLTSESLADYILDAIKSNPSEFATLANQLSQCEFTKDSHGHFGWIPNPVITLSSQFTIDSPSPQCPQHIIHSIPSDLLQNAFQTRPLSVTKFYSESNHSWYVFLVNDALHKL---HFETFSK---------GSTSKLGTDLRFEQNSYVIETMGCQANSSDSERMASALENAGFHAAKDPKSAHIVVLNTCAIREHAEHKVYGHLGVHAIRKQR-DSRVLLVVSGCVAQQEGETLLRKVPELDIIAGPQYANRLGELVKHVEENGVQICATNPIHVSEDLSNPVRTSKVTAWVNVIYGCNERCTYCVVPST-RGLEQSRSMVSIRNEIVKAAESGVKEIVLLGQNIDAYGRDLTPKNTFTQLLEYIHDVEGIKRIRFLTSHPRYMSSRLIDACAKLEKVCEHFHVPFQSGSDEILQKMSRGYTAQRYLQIIQNIRDKMPHAGISGDAIVGFPEESEEQFESTLDLMRSVGFDLVNTAAYSPRPNTPAALMKNQVPEEIKQERLKRINMLVKQQAAERSARYLGLIEEVLVESMNPKNENQVCGRTQGNRIVFFDGKLSELFGTLVQVRITQTHAFYLMGEVV 652          
BLAST of Ggra2165.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDEB4 (LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDEB4)

HSP 1 Score: 546 bits (1407), Expect = 7.580e-188
Identity = 271/428 (63.32%), Postives = 329/428 (76.87%), Query Frame = 0
Query:  220 MNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKR-TLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKVG 646
            MN++DSERMAGEL R GY +  DPF ++VLVLNTC+IR+HAE KVYS +GRH  RK   P+ +TL VAGCVAQQEG ++LRR+P LD+V GPQYA RLGDLL DV+ N  Q+AATDP+HI EDISKP+RES+VTAW++VIYGC E C++C V    R +EQSR+M A+RAE+   A  G REVVLLGQNVDAYGRD+  +  T A LL FIHDV GI+RIRFTTSHPRY+STNL++TC  LPK+MP FH+PPQSGDN ILK M+RGY+SE Y +VV  IRE IP+A I GDMIVGFPGETE QFQ SL+L+ +++FD +NTAAYSPRP TPAA   NQV +A K DRL R+N +  E ALERS RY+GR+E +LVE+ + KD   V GRTP N+   F G I  LKGK+VPV+I     F L+G+  G
Sbjct:    1 MNRADSERMAGELERLGYAKIDDPFSSAVLVLNTCSIRDHAEQKVYSIMGRHAQRKAAAPSDITLVVAGCVAQQEGMQLLRRVPALDIVMGPQYAGRLGDLLEDVQSNHVQVAATDPVHIHEDISKPRRESSVTAWLNVIYGCLERCTYCVVP-FARGLEQSRSMDAVRAELVAIAEQGFREVVLLGQNVDAYGRDLLSEAXTFAGLLRFIHDVPGIERIRFTTSHPRYMSTNLISTCRELPKVMPSFHVPPQSGDNDILKAMKRGYTSERYLAVVNNIREYIPEAAIAGDMIVGFPGETEAQFQNSLELVRKVQFDLLNTAAYSPRPNTPAATWDNQVSEAEKMDRLARINKLQDEIALERSQRYLGRVELILVEDRHAKDILSVTGRTPTNKLTKFAGDITILKGKLVPVQITSVTAFCLEGRIAG 427          
BLAST of Ggra2165.t1 vs. uniprot
Match: A0A7S0FYJ0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FYJ0_9RHOD)

HSP 1 Score: 540 bits (1390), Expect = 1.440e-184
Identity = 266/480 (55.42%), Postives = 355/480 (73.96%), Query Frame = 0
Query:  170 VVEETRHTLRTKHERTPSKKN----PNRTREMGSVNDISAPLPFTYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKV 645
            VVE+ RHTL+T   +  +  N    P   R+      I   +  TY +QT+GCQMN++DSE+M+GEL   G+ E  DPFR++V+V NTC+IR+HAE KVYSY+GRH  RK + P  VT+ V+GCVAQQEGEK+LRRIPE+D+V GPQY+NRL +LL  V + G Q+ AT+P+HI EDISKPKR S VTAWV++IYGC E CS+C V    R +EQSR   +I+ EI++ A  G++EVVLLGQN+DAYGRD+ P+ +LA+LL F+HDVDGI+RIRFTTSHPRY++  L+  C  LPK+  YFH+P QSGD+++LKEM+RGY+++ ++ +  RIR  +PDA +  D IVGFPGETEE+FQ ++DLM+ I+FD ++TAAYSPRP T AA+   QV + VK +RL R+N+   + A +RS RY+GR E++LVEE N KD  QV+GRT  NR  +F+G+I EL+GK+V VKI  A  FSL G+ V
Sbjct:    1 VVEDARHTLQTSLSKRGAPVNLTQIPRNQRDA-----IPEMIKGTYCVQTMGCQMNQADSEKMSGELEAAGFKEIDDPFRSNVIVFNTCSIRDHAEQKVYSYVGRHARRKWQNP-EVTIVVSGCVAQQEGEKLLRRIPEVDVVMGPQYSNRLRELLDSVNQ-GNQVCATEPVHIMEDISKPKRNSKVTAWVNIIYGCNERCSYCVVPTT-RGLEQSRPRDSIKEEIKQLAEQGVKEVVLLGQNIDAYGRDLRPRDSLADLLRFVHDVDGIERIRFTTSHPRYMTDRLIKACYELPKLCEYFHVPFQSGDDKVLKEMKRGYTAKRFKQIAERIRMYMPDAALSADAIVGFPGETEEEFQHTIDLMEEIRFDTVHTAAYSPRPNTLAAVWDTQVAEDVKVERLRRINEQTAKDAHDRSQRYLGRTEEILVEERNDKDPTQVLGRTRTNRLTFFKGNIDELRGKLVTVKIKEARTFSLTGELV 472          
BLAST of Ggra2165.t1 vs. uniprot
Match: A0A0G4ERE5 (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC)

HSP 1 Score: 545 bits (1403), Expect = 1.290e-183
Identity = 288/593 (48.57%), Postives = 386/593 (65.09%), Query Frame = 0
Query:   73 IEAIRIRHCRLESKELCDYVWEQVTHRKARLEDLAASLSTCAASKRQGGDLGWW-----WKDEVVPESTEEFGINDQLLAAALRSRPNRIERTETKDGWHVFVVEETRHTLRTKHERTPSKKNPNR-------------TREMGSVNDISAPLP----FTYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQ 643
            ++A+R+ H  LE++ L +   E++        DLA   S C A+K+  G +GW      + D ++P    E         AA+  +P  +    +  G H+  VE+    L T     P  K P                + +G+ + +         + Y + T+GCQMNK+DSERMAG+L   G   T D   A ++VLNTC+IR+ AE KVYS +G    RKR     VTL VAGCVAQQEGE++LRR+PELDLV GPQYANRLGDLL DV  NG Q+ AT+P  I ED +KP+RES+V AWV+VIYGC E+C++C V N  R VEQSR M ++R E+EE    G +EV LLGQN+D++GRDM+PKR  ++LL  + D  G++RIRF TSHPRYIS  +V+  A  P +M YFHIP Q+GDN++L+ MRRGY+ E Y  V+ RIR  IP+  I  D+IVGFPGETEEQF+++LDLM ++KFD + TAAYSPRP TPAA   NQ+PD VK DRL R+N++  +HA ER+LRY+GR+E+VLVEE N K+  QV+GRT  NR V+F+G IAEL+G++VPV++    P+SL G+
Sbjct:   47 VQAVRVSHILLETESLAELALERLRQGDVDFADLAEVASICQATKQDKGQVGWVSLKDDFLDPIMPLEVRE---------AAMALKPGDMTTVRSGRGVHIVKVEDVM-ALLTPTASQPRSKMPGSGQLLAASGLSRLFKKTVGAADGLEGERERESEWRYFVDTMGCQMNKADSERMAGQLESLGARVTDDAKGADIVVLNTCSIRDKAEQKVYSALGPFAARKRS-GKDVTLVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVA-NGNQVVATEPTFIMEDSTKPRRESSVAAWVNVIYGCNEHCTYCVVPNT-RGVEQSRPMESVRREMEELGALGFKEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIRRRIPEVAISADVIVGFPGETEEQFEQTLDLMRQVKFDCLITAAYSPRPHTPAATWPNQLPDDVKEDRLRRINELAAQHAYERNLRYLGRVEEVLVEERNVKNPTQVMGRTRGNRLVFFDGDIAELRGRMVPVRVTEVRPYSLTGR 626          
BLAST of Ggra2165.t1 vs. uniprot
Match: A0A7S2ZBX3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBX3_9RHOD)

HSP 1 Score: 538 bits (1387), Expect = 5.170e-182
Identity = 287/576 (49.83%), Postives = 372/576 (64.58%), Query Frame = 0
Query:   74 EAIRIRHCRLESKELCDYVWEQVTHRKAR-LEDLAASLSTCAASKRQGGDLGWWWKDEV-VPESTEEFGINDQLLAAALRSRPNRIERTETKDGWHVFVVEETRHTLRTKHERTPSKKNPNRTREMGSVNDISAPLPF-TYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKVG 646
            +  R+ H  + S+ELCD+V E+     A  +   + S+S C ASK  GGDLGW  K     PE  +     D             + +  +  GWH   V++ +  +      TP++      + +G +        + +Y I+T GCQMNKSDSERMAGEL   G         A V+V NTC+IREHAE K+YS +G    RK  YP ++ + VAGCVAQQE  ++ RR+PE+DL+ GPQYANRLG+LL DV + G Q+ AT+  HI ED+SKP R   ++AWV++IYGC E C++C V N  R VEQSRT  AIRAEIEE AR G REV LLGQN DAYGRD+ P+ T AELL  +HDVDGI+RIRFTTSHPRY + NL  TC+ L K+   F++P QSGD  +LK M RGY+ E Y  V+ +IRE IPDA I  D IVGFPGETEEQFQ +L+LM+ I+FD ++TAAYSPRP TP A M+NQV D+ K  RL R N   +  +L R+ RY+GR+E+VLV E N ++ +QV+GRT  NR  YFEG+I EL+GK+VPVKI+    F+L G + G
Sbjct:   53 DRFRVLHVLVLSEELCDFVIEEGRKNGAESIRKYSESISVCKASKHNGGDLGWHTKQTFPFPEIVDVVSSTDPHTG---------VFKARSASGWHAVYVDDVKRAIELTSW-TPTRTFRRTGQNLGKIRVKREQQEWNSYFIETHGCQMNKSDSERMAGELEAMGMQVARTMKEADVIVFNTCSIREHAEHKLYSQLGPIAQRKWTYP-NIAVVVAGCVAQQEASRLARRVPEVDLIVGPQYANRLGELLQDVAQ-GNQVVATEASHITEDLSKPIRVGGISAWVNIIYGCNERCTYCVVPNT-RGVEQSRTPQAIRAEIEELARQGYREVTLLGQNTDAYGRDLKPRVTFAELLRTVHDVDGIERIRFTTSHPRYFTKNLAETCSELSKVCESFNVPFQSGDTDVLKAMNRGYTVERYREVIRQIREEIPDAAITADTIVGFPGETEEQFQNTLELMEEIQFDHVHTAAYSPRPNTPGATMENQVSDSEKESRLRRANRRNEMDSLSRNQRYLGRVEEVLVTERNSRNEKQVMGRTRKNRVTYFEGNIEELRGKLVPVKIVEVGTFTLTGTQAG 615          
BLAST of Ggra2165.t1 vs. uniprot
Match: A0A251WJC1 (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WJC1_9CYAN)

HSP 1 Score: 531 bits (1368), Expect = 1.140e-181
Identity = 264/444 (59.46%), Postives = 326/444 (73.42%), Query Frame = 0
Query:  211 YAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLVLNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRESTVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIREVVLLGQNVDAYGRDMYPKR-------TLAELLTFIHDVDGIDRIRFTTSHPRYISTNLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIRECIPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPAAIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKDAQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKVGP 647
            Y I T GCQMNK+DSERMAG L   G+    +P  A V++ NTC IR++AE KVYSY+GR   RK+  P ++TL VAGCVAQQEGE++LRR+PELDLV GPQYAN+L  LL  V  NG Q+ AT+P+HI EDI+KP+R+S VTAWV+VIYGC E C++C V  V R VEQSRT  AIRAE+EE  R G +EV LLGQN+DAYGRD+   +       TL +LL F+HDV GIDRIRF TSHPRY +  L+  CA LPK+  +FHIP QSGDN +LK M RGY+ E Y  ++  IR  +PDA I  D IVGFPGETEEQFQ +L L+D I FD +NTAAYSPRP TPAA+  NQ+ + VKADRL R+N +V + A ERS RY+GR+E+VLVE++NPKDA QV+GRT  NR  +F+G I  LKG+I+P+KI    PFSL G+ + P
Sbjct:    5 YHITTFGCQMNKADSERMAGVLETMGFEAVEEPDEADVILYNTCTIRDNAEQKVYSYLGRQAKRKQEQP-NLTLIVAGCVAQQEGEQLLRRVPELDLVMGPQYANQLDSLLEQVF-NGSQVVATEPVHIMEDITKPRRDSVVTAWVNVIYGCNERCTYCVVPGV-RGVEQSRTPEAIRAEMEELGRQGYKEVTLLGQNIDAYGRDLPGSKPDGQHLHTLTDLLYFVHDVPGIDRIRFATSHPRYFTERLIKACAELPKVCEHFHIPFQSGDNDVLKAMSRGYTQEKYRRIIDTIRSYMPDAAISADAIVGFPGETEEQFQNTLKLVDDIGFDLLNTAAYSPRPGTPAALWDNQLSEEVKADRLQRLNHLVSQKAAERSQRYLGRVEEVLVEDQNPKDATQVMGRTQGNRLAFFKGDIQTLKGQIIPIKITEVRPFSLTGEMLQP 445          
The following BLAST results are available for this feature:
BLAST of Ggra2165.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0370.000e+074.15tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
R7QB299.140e-31267.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IGB23.160e-19749.83tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
R7QN232.900e-19651.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZI684.780e-19048.50Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDEB47.580e-18863.32LOW QUALITY PROTEIN: tRNA-2-methylthio-N(6)-dimeth... [more]
A0A7S0FYJ01.440e-18455.42Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4ERE51.290e-18348.57Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2ZBX35.170e-18249.83Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A251WJC11.140e-18159.46tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 352..571
e-value: 7.7E-50
score: 181.6
IPR002792TRAM domainPFAMPF01938TRAMcoord: 583..645
e-value: 7.3E-12
score: 45.1
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 582..646
score: 13.851462
NoneNo IPR availableTIGRFAMTIGR01574TIGR01574coord: 211..643
e-value: 2.4E-123
score: 410.4
NoneNo IPR availablePFAMPF13616Rotamase_3coord: 84..171
e-value: 8.7E-5
score: 23.0
NoneNo IPR availableGENE3D3.10.50.40coord: 72..182
e-value: 1.8E-10
score: 43.1
NoneNo IPR availableSFLDSFLDG01082B12-binding_domain_containingcoord: 338..553
e-value: 3.1E-24
score: 80.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..64
NoneNo IPR availablePANTHERPTHR43020CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1coord: 164..645
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 356..558
e-value: 1.15151E-8
score: 53.4913
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 348..579
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 69..172
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 357..528
e-value: 7.8E-22
score: 78.4
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 348..579
score: 33.061138
IPR005839MethylthiotransferaseTIGRFAMTIGR00089TIGR00089coord: 210..642
e-value: 1.9E-137
score: 456.5
IPR005839MethylthiotransferaseSFLDSFLDG01061methylthiotransferasecoord: 210..645
e-value: 0.0
score: 491.4
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20tm_1862 like domaincoord: 349..585
e-value: 2.4E-76
score: 258.3
IPR038135Methylthiotransferase, N-terminal domain superfamilyGENE3D3.40.50.12160coord: 210..341
e-value: 2.6E-33
score: 116.4
IPR013848Methylthiotransferase, N-terminalPFAMPF00919UPF0004coord: 211..310
e-value: 1.3E-26
score: 92.5
IPR013848Methylthiotransferase, N-terminalPROSITEPS51449MTTASE_Ncoord: 209..326
score: 33.062923
IPR006463tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaBSFLDSFLDF00273(dimethylallyl)adenosine_tRNAcoord: 210..645
e-value: 0.0
score: 491.4
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 73..173
score: 11.49946

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:532180..534129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2165.t1Ggra2165.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 532180..534129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2165.t1 ID=Ggra2165.t1|Name=Ggra2165.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=650bp
MRGKGAFVSVGFNGRSESWLSPKVSRAQQICHQRARHITNAVLQQPKAKS
QPRRTPSPGEPAHKYFEFSPEDIEAIRIRHCRLESKELCDYVWEQVTHRK
ARLEDLAASLSTCAASKRQGGDLGWWWKDEVVPESTEEFGINDQLLAAAL
RSRPNRIERTETKDGWHVFVVEETRHTLRTKHERTPSKKNPNRTREMGSV
NDISAPLPFTYAIQTLGCQMNKSDSERMAGELSRRGYTETSDPFRASVLV
LNTCNIREHAESKVYSYIGRHVMRKRRYPTSVTLCVAGCVAQQEGEKMLR
RIPELDLVFGPQYANRLGDLLSDVERNGCQIAATDPIHIQEDISKPKRES
TVTAWVSVIYGCGENCSFCTVGNVVRTVEQSRTMGAIRAEIEEAARDGIR
EVVLLGQNVDAYGRDMYPKRTLAELLTFIHDVDGIDRIRFTTSHPRYIST
NLVNTCATLPKIMPYFHIPPQSGDNQILKEMRRGYSSEAYESVVGRIREC
IPDAGICGDMIVGFPGETEEQFQRSLDLMDRIKFDGMNTAAYSPRPQTPA
AIMKNQVPDAVKADRLHRMNDVVKEHALERSLRYVGRIEQVLVEEENPKD
AQQVVGRTPANRRVYFEGSIAELKGKIVPVKIIHAYPFSLKGQKVGPAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR002792TRAM_dom
IPR007197rSAM
IPR005839Methylthiotransferase
IPR023404rSAM_horseshoe
IPR038135Methylthiotransferase_N_sf
IPR013848Methylthiotransferase_N
IPR006463MiaB_methiolase
IPR000297PPIase_PpiC