Ggra2160.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2160.t1
Unique NameGgra2160.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length115
Homology
BLAST of Ggra2160.t1 vs. uniprot
Match: A0A2V3J1D5 (LYR motif-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1D5_9FLOR)

HSP 1 Score: 186 bits (472), Expect = 4.250e-59
Identity = 90/114 (78.95%), Postives = 105/114 (92.11%), Query Frame = 0
Query:    1 MKHRRQVLSLYRRVLRIAKSWEEPSERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQSQGVNRKAAREKPEY 114
            MK+R+QVLSLYRR LR++++W EPSERSYI NEA++LVR NRNI+S DVIAEKVQEFEAR+TTG+HY+IPYPRPTNV PGATGKDPEVITPVYL+SY+Q Q +NRK AREKPEY
Sbjct:    1 MKYRKQVLSLYRRALRLSRTWAEPSERSYIANEARTLVRSNRNIQSLDVIAEKVQEFEARLTTGVHYQIPYPRPTNVVPGATGKDPEVITPVYLNSYQQVQNMNRKTAREKPEY 114          
BLAST of Ggra2160.t1 vs. uniprot
Match: R7Q9Q3 (Complex1_LYR_dom domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9Q3_CHOCR)

HSP 1 Score: 127 bits (320), Expect = 7.440e-36
Identity = 60/99 (60.61%), Postives = 77/99 (77.78%), Query Frame = 0
Query:    1 MKHRRQVLSLYRRVLRIAKSWEEPSERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQ 99
            + HR ++LS+YR VLR++++WE  SER YI +E ++LVR+N+ +     I  KV EFE RI TG+HYKIPYPRP NVAPGATGKDPE +TPVYL SYK+
Sbjct:    6 VSHRAKILSMYRDVLRLSRTWERSSERQYIRDEVRTLVRKNKFLTDSKEIDFKVHEFETRIETGIHYKIPYPRPVNVAPGATGKDPETVTPVYLHSYKE 104          
BLAST of Ggra2160.t1 vs. uniprot
Match: M2XZ60 (LYR motif-containing protein 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZ60_GALSU)

HSP 1 Score: 102 bits (254), Expect = 1.650e-25
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPSERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYK---QSQGVNRKAAREKPEY 114
            +RQVL LYR +LR+AK+W+EP E  YI  EA  L  +N+ I  ++ I EK+ E   R+  G+HYKIPYPRP +V PGATGK  ++I P Y+ SY        + R+A R K  +
Sbjct:   12 KRQVLRLYRDILRVAKNWKEPEEAQYIREEADRLFHQNKTITGKEEIEEKLFEGRTRLELGIHYKIPYPRPYHVVPGATGKTRDMIKPAYMASYDWDLSHSDITREAKRPKTRF 125          
BLAST of Ggra2160.t1 vs. uniprot
Match: A0A7L2I8N5 (LYRM1 protein (Fragment) n=3 Tax=Ramphastidae TaxID=57381 RepID=A0A7L2I8N5_9PICI)

HSP 1 Score: 85.9 bits (211), Expect = 2.460e-19
Identity = 52/115 (45.22%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPS--------ERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATG-----------KDPEVITPVYLDSYKQ 99
            R+QVL+LYRRV RIA SW+  S        E+ YI NEA+ L RRNRN+    +I + V+E EARI  GLHY IPYPRP ++ P A             K  +V  P+YL S+ +
Sbjct:    6 RQQVLALYRRVFRIASSWQSASGRVEETAQEKEYIKNEARRLFRRNRNVTDPQLIKQCVEECEARIEIGLHYNIPYPRPIHLPPMALAHKQGRRLRHQEKLRKVSKPIYLKSHDE 120          
BLAST of Ggra2160.t1 vs. uniprot
Match: A0A8C2W9D0 (LYR motif containing 1 n=2 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2W9D0_CHILA)

HSP 1 Score: 83.6 bits (205), Expect = 1.980e-18
Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPS--------ERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAP-----------GATGKDPEVITPVYLDSYKQ 99
            RR+VLSLYRR+ R+A+ W   S        E+ YI+NEA++L R+N+N+   D+I + + E  ARI  GLHYKIPYPRP ++ P            A  K  ++  PVYL S+ +
Sbjct:    6 RREVLSLYRRIFRLARKWHAASGQTEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQYIDECTARIEIGLHYKIPYPRPIHLPPMGLTPLQARGLRAQEKLRKLSRPVYLKSHDE 120          
BLAST of Ggra2160.t1 vs. uniprot
Match: LYR motif-containing protein 1-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8250D (LYR motif-containing protein 1-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8250D)

HSP 1 Score: 84.0 bits (206), Expect = 2.010e-18
Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPS--------ERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAPGA 81
            RR+VLSLY+ +LR  K+WE  S        ER YI+NEAK L R+N+N+++E+ I  ++ E ++R+   LHY+IPYPRP N+ P A
Sbjct:   20 RREVLSLYKNILRTGKNWEAASGKPQHTESERKYIINEAKELFRKNKNLKNEEEIKSRLMEADSRLQMALHYRIPYPRPVNLPPQA 105          
BLAST of Ggra2160.t1 vs. uniprot
Match: A0A3Q0GX80 (LYR motif-containing protein 1 isoform X2 n=2 Tax=Alligator sinensis TaxID=38654 RepID=A0A3Q0GX80_ALLSI)

HSP 1 Score: 84.7 bits (208), Expect = 3.320e-18
Identity = 48/115 (41.74%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPS--------ERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAP-------GATGKDPEVIT----PVYLDSYKQ 99
            RR+VL LYR++ RIAK W+  S        E+ YI+NEAK+L ++N+N+   +VI + ++E +AR+  GLHY IPYPRP ++ P       G T +  E +     PVYL SY +
Sbjct:   70 RREVLGLYRKIFRIAKKWQSVSGQMEDTIKEKQYIINEAKTLFQKNKNLTDPEVIHQCIEECKARVEIGLHYNIPYPRPIHLPPMGLAQKHGRTFQKQEKLRKLSKPVYLKSYDE 184          
BLAST of Ggra2160.t1 vs. uniprot
Match: A0A1U7RUH1 (LYR motif-containing protein 1 isoform X1 n=4 Tax=Alligator sinensis TaxID=38654 RepID=A0A1U7RUH1_ALLSI)

HSP 1 Score: 84.7 bits (208), Expect = 3.470e-18
Identity = 48/115 (41.74%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPS--------ERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAP-------GATGKDPEVIT----PVYLDSYKQ 99
            RR+VL LYR++ RIAK W+  S        E+ YI+NEAK+L ++N+N+   +VI + ++E +AR+  GLHY IPYPRP ++ P       G T +  E +     PVYL SY +
Sbjct:   72 RREVLGLYRKIFRIAKKWQSVSGQMEDTIKEKQYIINEAKTLFQKNKNLTDPEVIHQCIEECKARVEIGLHYNIPYPRPIHLPPMGLAQKHGRTFQKQEKLRKLSKPVYLKSYDE 186          
BLAST of Ggra2160.t1 vs. uniprot
Match: A0A8C9N920 (LYR motif containing 1 n=16 Tax=Passeriformes TaxID=9126 RepID=A0A8C9N920_SERCA)

HSP 1 Score: 82.8 bits (203), Expect = 3.970e-18
Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPS--------ERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAP-------GATGKDPE----VITPVYLDSYKQ 99
            R+ VL LYRRV+RIAK+W+  S        E+ YI NEA++L R+NRN+    +I + ++E EARI  GLHY IPYPRP ++ P       G T +  E    +  P+YL S+ +
Sbjct:    6 RQAVLGLYRRVMRIAKTWQSASGQTEETMREKEYIRNEARTLFRKNRNVTDPKLIKQCIEECEARIEIGLHYNIPYPRPIHLPPMGLAHKQGRTLRHQEKLRKISKPIYLKSHDE 120          
BLAST of Ggra2160.t1 vs. uniprot
Match: A0A2I2Y204 (Complex1_LYR_dom domain-containing protein n=5 Tax=Catarrhini TaxID=9526 RepID=A0A2I2Y204_GORGO)

HSP 1 Score: 81.6 bits (200), Expect = 7.590e-18
Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    4 RRQVLSLYRRVLRIAKSWEEPS--------ERSYIVNEAKSLVRRNRNIESEDVIAEKVQEFEARITTGLHYKIPYPRPTNVAP 79
            R++VL LYR + R+A+ W+  S        E+ YI+NEA++L R+N+N+   D+I + + E  ARI TGLHYKIPYPRP +V P
Sbjct:    6 RQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCIDECTARIETGLHYKIPYPRPVSVTP 89          
The following BLAST results are available for this feature:
BLAST of Ggra2160.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1D54.250e-5978.95LYR motif-containing protein 1 n=1 Tax=Gracilariop... [more]
R7Q9Q37.440e-3660.61Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
M2XZ601.650e-2546.49LYR motif-containing protein 1 n=1 Tax=Galdieria s... [more]
A0A7L2I8N52.460e-1945.22LYRM1 protein (Fragment) n=3 Tax=Ramphastidae TaxI... [more]
A0A8C2W9D01.980e-1841.74LYR motif containing 1 n=2 Tax=Chinchilla lanigera... [more]
LYR motif-containing protein 1-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8250D2.010e-1847.67LYR motif-containing protein 1-like isoform X1 n=2... [more]
A0A3Q0GX803.320e-1841.74LYR motif-containing protein 1 isoform X2 n=2 Tax=... [more]
A0A1U7RUH13.470e-1841.74LYR motif-containing protein 1 isoform X1 n=4 Tax=... [more]
A0A8C9N9203.970e-1842.61LYR motif containing 1 n=16 Tax=Passeriformes TaxI... [more]
A0A2I2Y2047.590e-1847.62Complex1_LYR_dom domain-containing protein n=5 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 5..56
e-value: 8.1E-11
score: 41.8
IPR040330LYR motif-containing protein 1PANTHERPTHR14273LYR MOTIF-CONTAINING PROTEIN 1coord: 2..88
IPR045294LYRM1, LYR domainCDDcd20261Complex1_LYR_LYRM1coord: 6..73
e-value: 9.61871E-27
score: 92.3044

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:470267..470748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2160.t1Ggra2160.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 470267..470748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2160.t1 ID=Ggra2160.t1|Name=Ggra2160.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=115bp
MKHRRQVLSLYRRVLRIAKSWEEPSERSYIVNEAKSLVRRNRNIESEDVI
AEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQS
QGVNRKAAREKPEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom
IPR040330LYRM1
IPR045294Complex1_LYR_LYRM1