Ggra2154.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2154.t1
Unique NameGgra2154.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length628
Homology
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A2V3J2Z2 (MOSC_N domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z2_9FLOR)

HSP 1 Score: 296 bits (757), Expect = 3.810e-90
Identity = 174/429 (40.56%), Postives = 239/429 (55.71%), Query Frame = 0
Query:  216 FSLVCIANFAFGFGAGYLYAQYRNICT--SEEEGNHAASKSDNTTGTVTQEVTAESQQHSATTVSDSVVEEQHDSLEQASRKFMESPQCETEPKSPPGTPMRTDDKPFTTRRVLAAPGVESHAPENPNQELQHEL-----------EQLNASVAK-------------EEESITSGCETNKLGLATVEEQGNVNITDLQVQPIHGCPPQSVTSIRLNQDGVENHLMYAVSDFTGRYISNEKVPSLLEITPTILENGHLRLSAPGLSPAIHEPKFWGRKKNITIHGVQYEAVDQGDSVSQFFASYLEIPGVRLLLLRPPPLSNGGHQLFRTWPTADRPLLLISEESKSSAENNHSTPMGTNIVISASESDILSSTAIKIGDHLFEVMKVRGEGSHENIPSHHLLGGGMTLVPVNFGRNEFVLNCDQTIVM 618
            F+LVCIANFAFGFGAGY++A YRN C    EEE    +   +  T    +E+                              +  +   + EPKSPPGTP+RT+D   +   +L  P      P   +Q   HE            EQ+ A VA+             +E    +  +    G    E  G +++  L +QPIHGC  QSV S+RLNQ+GVENHLMYAV++FTGRYIS++KVP+L E++PT+LENG L L AP ++P  H+ K WG+ K ITI GVQYEAVDQGD VS+FF  +LEIPGVRLLL+RPPP++    Q FRTWP+ADRPLLL   +      +N   P+  N+ +S + S++ S   IKIGD+ FE++K     S ++  + +    G  L+PV+  R+E+ L   Q + +
Sbjct:   25 FALVCIANFAFGFGAGYIFAHYRNSCEVEQEEETTQVSLSKEEETECQAEELNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTPAESSQPEPKSPPGTPLRTEDDSLSENEILTNPDARP-LPSEASQVKLHEAMPQFEKTATAEEQVYAHVAEKTDIDDDDTXSEVQESPTLTAADAEADGSQLQESTGEISVAQLHIQPIHGCRAQSVASLRLNQNGVENHLMYAVAEFTGRYISDDKVPALREVSPTVLENGDLYLEAPDVTPLRHQRKSWGQMKRITICGVQYEAVDQGDIVSKFFVDFLEIPGVRLLLIRPPPIAGESGQTFRTWPSADRPLLLAGADVVPQ-NSNSDLPLRPNVGLSNTHSEMESWMQIKIGDYSFELVKTDVSNSTDSTTTENQKHAGHVLLPVDLKRDEWTLRSGQVVTV 451          
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A2V3J038 (Thiamine phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J038_9FLOR)

HSP 1 Score: 182 bits (462), Expect = 3.220e-50
Identity = 96/140 (68.57%), Postives = 117/140 (83.57%), Query Frame = 0
Query:   24 LSVQRIVAQVVASPPNPPQVTFVQLRDKNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDAGKPLGEQQLRRLL 163
            ++V++IVAQV +S  +P +VTFVQLRDK +SR +S+ LGK LR ITA+ANVAFVVNDDIQLAALL+ADGVHLGQ+D+ VSVAR +LG  AIVGVSA  E +ID AIA GADYVGVG VFAT+SK DAG  +GE +LR+L+
Sbjct:    1 MTVEQIVAQVTSSSSHPNRVTFVQLRDKRLSREQSLHLGKVLRHITAQANVAFVVNDDIQLAALLQADGVHLGQEDESVSVARHVLGNDAIVGVSADCEQQIDVAIAHGADYVGVGPVFATSSKADAGDAIGEYRLRQLV 140          
BLAST of Ggra2154.t1 vs. uniprot
Match: I0BPT0 (Thiamine-phosphate synthase n=3 Tax=Paenibacillus mucilaginosus TaxID=61624 RepID=I0BPT0_9BACL)

HSP 1 Score: 133 bits (335), Expect = 3.930e-32
Identity = 76/152 (50.00%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   11 SVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDAGKPLGEQQLRRL 162
            SVYLVTD       S   IV   VA       VT VQLRDK     + +  G+++RE+   A + FVVND   LA LL ADGVH+GQDD P   AR LLG  AI+GVSA T  E + A+A GADY+GVG V+ATASK DAG+ +G   + R+
Sbjct:   11 SVYLVTDTAGYEHRSAAEIVRAAVAG-----GVTLVQLRDKQAQLRDVLPAGREIRELCRSAGIPFVVNDRADLALLLEADGVHVGQDDLPAQEARRLLGPDAIIGVSAGTMEEAEWAVAQGADYLGVGPVYATASKKDAGEAIGTDLIARI 157          
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A4C2EIJ9 (Thiamine-phosphate synthase n=2 Tax=Haloarcula mannanilytica TaxID=2509225 RepID=A0A4C2EIJ9_9EURY)

HSP 1 Score: 131 bits (329), Expect = 3.740e-31
Identity = 74/141 (52.48%), Postives = 93/141 (65.96%), Query Frame = 0
Query:    9 DPSVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPD 149
            D  VYLVT    + G + + IVA  +        V  VQLR+K+ +  E  ELG+++RE+T +A V FVVND + LA  L ADGVHLG DD PVSVARDLLGE AI+G S +T  + + A A GADY+GVG+VFAT SK D
Sbjct:   16 DWDVYLVTQASLSAGRTTEEIVADAIDG-----GVGVVQLREKDRTARERYELGQRVRELTRKAGVTFVVNDRVDLAQALDADGVHLGDDDLPVSVARDLLGEDAIIGRSVSTVEDAEAAEAAGADYLGVGAVFATGSKDD 151          
BLAST of Ggra2154.t1 vs. uniprot
Match: THIE (Thiamine-phosphate synthase n=7 Tax=Haloarcula TaxID=2237 RepID=THIE_HALMA)

HSP 1 Score: 130 bits (327), Expect = 4.580e-31
Identity = 73/141 (51.77%), Postives = 92/141 (65.25%), Query Frame = 0
Query:    9 DPSVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPD 149
            D  VYLVT    + G +   IVA+ + S      V  VQLR+KN +  E  ELG++LRE+T  A+V FVVND I LA  + ADGVHLG DD PVSVARD+LG+ A++G S +T  +   A   GADY+GVG+VFAT SK D
Sbjct:    3 DWDVYLVTQASLSAGRTTDEIVAEAIES-----GVGVVQLREKNRTARERYELGQKLRELTREADVTFVVNDRIDLAQAIDADGVHLGDDDLPVSVARDILGDDAVIGRSVSTVEDAREAATAGADYLGVGAVFATGSKDD 138          
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A7Z9ZIN4 (Thiamine-phosphate synthase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Z9ZIN4_9CHLR)

HSP 1 Score: 130 bits (326), Expect = 5.950e-31
Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = 0
Query:   11 SVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDAGKPLGEQQLRRLL 163
            ++Y++TDP  + G S   +    +         T +QLRDK  +  E +E G++LR +T    V F+VND + +A  + ADGVHLG DD PV +AR L+G  AI+G S  T  +   A ADGADY+GVG+VF T +KPDAG P+G + LR ++
Sbjct:    4 ALYVITDPKLSRGRSHLEVARAAIRG-----GATVIQLRDKEATTRELVETGQRLRALTREMGVTFIVNDRVDVALAVEADGVHLGVDDMPVPIARRLMGPEAIIGFSPETVEQARQAEADGADYLGVGAVFGTGTKPDAGPPIGLEGLREMV 151          
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A2T0LIM4 (Thiamine-phosphate synthase n=1 Tax=Planifilum fimeticola TaxID=201975 RepID=A0A2T0LIM4_9BACL)

HSP 1 Score: 128 bits (322), Expect = 3.160e-30
Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 0
Query:   11 SVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKN--VSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDAGKPLGEQ---QLRRLLFQPLWQV----LNPPGQPSSWL-----LSCLVAIVTKYDP 194
            S+YLV       G    R++   +        +T  Q R+KN  ++  E++ LG++LR +    N+ F+VND   LA LL ADG+H+GQDD PV  AR L+G H ++GVSA T  E + A+ DGADY+GVG ++ATA+KPDAGKP+G +   ++R+ L  P+  V    ++ PG P         ++ + AI  K DP
Sbjct:    8 SLYLVMGSQDCRGRDPVRVLDLAIDG-----GITLFQFREKNSGLTLRETVSLGERLRHLCRERNIPFIVNDRADLALLLDADGLHVGQDDLPVWEARRLIGPHRLLGVSAETVEEAEQALRDGADYLGVGPIYATATKPDAGKPIGTRAIAEMRKRLSSPVPIVGIGGIDVPGVPEVIQAGADGVAVVSAIAGKPDP 200          
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A1I2M976 (Thiamine-phosphate synthase n=1 Tax=Planifilum fulgidum TaxID=201973 RepID=A0A1I2M976_9BACL)

HSP 1 Score: 128 bits (322), Expect = 3.420e-30
Identity = 70/162 (43.21%), Postives = 101/162 (62.35%), Query Frame = 0
Query:   11 SVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKN--VSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDAGKPLGE---QQLRRLLFQPL 167
            S+YLV       G    R++ Q +        +T  Q R+KN  ++  E++ LG++LR +    N+ F+VND   LA LL ADG+H+GQDD PV  AR L+G H ++GVSA T  E + A+ +GADY+GVG ++ATA+KPDAGKP+G     ++R+ L  PL
Sbjct:    8 SLYLVMGSQDCRGRDPVRVLDQAIDG-----GITLFQFREKNSGLTLRETVSLGERLRSLCRERNIPFIVNDRADLALLLDADGLHVGQDDLPVRQARRLIGPHRLLGVSAETVEEAEQALREGADYLGVGPIYATATKPDAGKPIGPGAIAEIRQRLSSPL 164          
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A7C3S855 (Thiamine-phosphate synthase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3S855_9BACT)

HSP 1 Score: 128 bits (321), Expect = 3.500e-30
Identity = 73/166 (43.98%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   12 VYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDAGKPLGEQQLRRLLFQPLWQVLNPPGQP 177
            VY+VTD    P  S   I    VA          VQLRDK  +  + +E  + +R++T R    F+VND + +A    ADGVHLG DD PV VAR LLG   I+G S A E E   A+A+GADYV +GSVFAT++KPDAG+P+G + +RR+      + + PP  P
Sbjct:    8 VYVVTDRFINPSRSHVDIAKAAVAG-----GACAVQLRDKEATTRQLLEWARAIRDLTFRTETLFIVNDRVDIALAADADGVHLGDDDMPVPVARRLLGAGKIIGRSVANEDEAIRAVAEGADYVSIGSVFATSTKPDAGEPVGVEMVRRV------RKVLPPDYP 162          
BLAST of Ggra2154.t1 vs. uniprot
Match: A0A7C5YKV5 (Thiamine-phosphate synthase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C5YKV5_9BACT)

HSP 1 Score: 128 bits (321), Expect = 3.590e-30
Identity = 70/158 (44.30%), Postives = 98/158 (62.03%), Query Frame = 0
Query:    3 VSRRNFDPSVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRDKNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQPVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDAGKPLGEQQLR 160
            +S+R F   VY+VTD    P  S   I    VA        + +QLRDK  +  + +E  K +R++T + +  F+VND + +A    ADG+H+G DD PV VAR LLGE  I+G S A E E   AIA+GADYV +GS+FAT++KPDAG+P+G + +R
Sbjct:    1 MSKRIF--GVYVVTDRFINPNRSHVDIAKAAVAG-----GASLIQLRDKEATTRQLLEWAKVIRDLTRKTDTLFIVNDRVDIALASDADGIHVGDDDMPVPVARRLLGEGKIIGRSVANEDEALKAIAEGADYVSIGSIFATSTKPDAGEPIGVEAIR 151          
The following BLAST results are available for this feature:
BLAST of Ggra2154.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2Z23.810e-9040.56MOSC_N domain-containing protein n=1 Tax=Gracilari... [more]
A0A2V3J0383.220e-5068.57Thiamine phosphate synthase n=1 Tax=Gracilariopsis... [more]
I0BPT03.930e-3250.00Thiamine-phosphate synthase n=3 Tax=Paenibacillus ... [more]
A0A4C2EIJ93.740e-3152.48Thiamine-phosphate synthase n=2 Tax=Haloarcula man... [more]
THIE4.580e-3151.77Thiamine-phosphate synthase n=7 Tax=Haloarcula Tax... [more]
A0A7Z9ZIN45.950e-3143.14Thiamine-phosphate synthase n=1 Tax=Anaerolineae b... [more]
A0A2T0LIM43.160e-3039.39Thiamine-phosphate synthase n=1 Tax=Planifilum fim... [more]
A0A1I2M9763.420e-3043.21Thiamine-phosphate synthase n=1 Tax=Planifilum ful... [more]
A0A7C3S8553.500e-3043.98Thiamine-phosphate synthase n=1 Tax=Armatimonadete... [more]
A0A7C5YKV53.590e-3044.30Thiamine-phosphate synthase n=1 Tax=bacterium TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..342
NoneNo IPR availablePANTHERPTHR20857THIAMINE-PHOSPHATE PYROPHOSPHORYLASEcoord: 2..162
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..235
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 236..627
NoneNo IPR availableSUPERFAMILY141673MOSC N-terminal domain-likecoord: 384..506
NoneNo IPR availableTMHMMTMhelixcoord: 212..234
IPR005303MOSC, N-terminal beta barrelPFAMPF03476MOSC_Ncoord: 383..496
e-value: 5.2E-12
score: 45.7
IPR022998Thiamine phosphate synthase/TenIPFAMPF02581TMP-TENIcoord: 12..162
e-value: 3.7E-41
score: 140.4
IPR022998Thiamine phosphate synthase/TenICDDcd00564TMP_TenIcoord: 12..162
e-value: 1.68509E-54
score: 182.333
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..167
e-value: 6.1E-44
score: 151.8
IPR034291Thiamine phosphate synthaseHAMAPMF_00097TMP_synthasecoord: 9..301
score: 19.26265
IPR036206Thiamin phosphate synthase superfamilySUPERFAMILY51391Thiamin phosphate synthasecoord: 5..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:449225..452204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2154.t1Ggra2154.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 449225..452204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2154.t1 ID=Ggra2154.t1|Name=Ggra2154.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=628bp
MRVSRRNFDPSVYLVTDPHTAPGLSVQRIVAQVVASPPNPPQVTFVQLRD
KNVSRAESIELGKQLREITARANVAFVVNDDIQLAALLRADGVHLGQDDQ
PVSVARDLLGEHAIVGVSAATEHEIDTAIADGADYVGVGSVFATASKPDA
GKPLGEQQLRRLLFQPLWQVLNPPGQPSSWLLSCLVAIVTKYDPPIGLTP
PPCARRVCRHRVCFPFSLVCIANFAFGFGAGYLYAQYRNICTSEEEGNHA
ASKSDNTTGTVTQEVTAESQQHSATTVSDSVVEEQHDSLEQASRKFMESP
QCETEPKSPPGTPMRTDDKPFTTRRVLAAPGVESHAPENPNQELQHELEQ
LNASVAKEEESITSGCETNKLGLATVEEQGNVNITDLQVQPIHGCPPQSV
TSIRLNQDGVENHLMYAVSDFTGRYISNEKVPSLLEITPTILENGHLRLS
APGLSPAIHEPKFWGRKKNITIHGVQYEAVDQGDSVSQFFASYLEIPGVR
LLLLRPPPLSNGGHQLFRTWPTADRPLLLISEESKSSAENNHSTPMGTNI
VISASESDILSSTAIKIGDHLFEVMKVRGEGSHENIPSHHLLGGGMTLVP
VNFGRNEFVLNCDQTIVMIKPGPEECA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005303MOSC_N
IPR022998ThiamineP_synth_TenI
IPR013785Aldolase_TIM
IPR034291TMP_synthase
IPR036206ThiamineP_synth_sf