Ggra2144.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2144.t1
Unique NameGgra2144.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length284
Homology
BLAST of Ggra2144.t1 vs. uniprot
Match: A0A2V3J033 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J033_9FLOR)

HSP 1 Score: 367 bits (942), Expect = 2.660e-125
Identity = 175/283 (61.84%), Postives = 227/283 (80.21%), Query Frame = 0
Query:    1 MLQFLSNLKTEYRPYAAHPQTIIVGTNEARKAFCKGMDGVLLTRENAIVCDLHILSSLHRQAGWRYVAIVSSASELYTIAKKVRTTSNIHAVNFVVIGIQCDLAQGVSLRTAALKELDAAGVILVEESDGRGQKVFQDILRVWREHKDDESMLSVWGEASLVSAKDVIIPPRWDSEGKIRAVVDAAGESYEALLEASSWGTEIEPPKVDMPTEQSRVERQELGKRKKEEYLRNFEAWTTRMQQVAEKAKQNPGNDVTQVDGAEANEKTPAQADFFQKLLAGTR 283
            ML+ LS LK EY PY  HPQTIIVGTNE+R AF + ++GVL T  NAI+CDLHIL+S+ RQ  WRY+A+VSSA+ELYTIA  VRT ++I + NFVV+G++CDL QGV+LRTAAL ELDA G+ILV+E +GR ++VF DIL  WRE  DD S+LSVWGEASL  AKD +IPP+WDSEGKIRAVVDAAGE Y+AL+    WGT++EPP++++ TEQ + E +  G+RKK E+++ ++ W  RMQ++AE+A+Q PG+ V+ VDG+  +++ PAQADFFQKLLAGTR
Sbjct:    1 MLESLSKLKAEYEPYPVHPQTIIVGTNESRTAFNETLEGVLHTIPNAIICDLHILNSIQRQPDWRYIAVVSSAAELYTIATAVRTVAHIRSTNFVVLGVKCDLGQGVALRTAALHELDAPGLILVQEQNGRAKQVFNDILHTWRESADDNSVLSVWGEASLARAKDTVIPPKWDSEGKIRAVVDAAGEDYDALISTPPWGTQVEPPQIELLTEQKQEELRAEGRRKKTEFIQRYKGWGARMQELAERARQKPGDQVSDVDGSSTSDRAPAQADFFQKLLAGTR 283          
BLAST of Ggra2144.t1 vs. uniprot
Match: R7Q5U9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5U9_CHOCR)

HSP 1 Score: 139 bits (350), Expect = 8.820e-36
Identity = 98/288 (34.03%), Postives = 150/288 (52.08%), Query Frame = 0
Query:   20 QTIIVGTNEARKAFCKGMDGVLLTRENAIVCDLHILSSLHRQAGWRYVAIVSSASELYTIAKKVRTTSNIHAVNFVVIGIQC-DLAQGVSLRTAALKELDAAGVILVE---ESDGRGQKVFQDILRVWRE------HKDDESMLSVWGEASLVSAKDVIIPPRWDSEGKIRAVVDAAGESYEALLEASSWG---TEIEPPKVDMPTE-QSRVERQELGKRKKEEYLRNFEAWTTRM-------QQVAEKAKQNPGNDVTQVDGAEANEKTPA-------QADFFQKLL 279
            QT I GT EARK F     G+L   + A+ CD+  L ++H +  W++V IV +A+EL  I+  + + +     N +VI +   D  +  ++R+AAL  L   G+++     E  GR  ++ Q +L  W +      + D   +L +WGE SL SA DVIIPP WDSEGKIRAV DAAG  Y+ ++  SSW    +  E  ++ + TE +  V+ QE   + +EE +R  ++W   +       QQ  E A +           A++ +  PA       +ADFFQ+LL
Sbjct:   20 QTFIAGTEEARKTFNPSYTGILAPVDTALTCDILALQAMHSRQNWQWVVIVETAAELREISAHIESPNP----NRIVIAVVSRDGKEQCAIRSAALNYLGGMGLVIPTGSGEKTGRAVQLVQRLLHAWGQGSLDMTNSDHAPLLRIWGEPSLSSAVDVIIPPGWDSEGKIRAVADAAGWDYDEIIRDSSWNRPTSSEEAIRLPVLTEAEEMVKFQEEAAKMREEDMRKEQSWLKSLEVKIATHQQAQEAATEKAKIASASGSAAKSKQTVPAHPKPSRAKADFFQRLL 303          
The following BLAST results are available for this feature:
BLAST of Ggra2144.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0332.660e-12561.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5U98.820e-3634.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:420232..421083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2144.t1Ggra2144.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 420232..421083 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2144.t1 ID=Ggra2144.t1|Name=Ggra2144.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=284bp
MLQFLSNLKTEYRPYAAHPQTIIVGTNEARKAFCKGMDGVLLTRENAIVC
DLHILSSLHRQAGWRYVAIVSSASELYTIAKKVRTTSNIHAVNFVVIGIQ
CDLAQGVSLRTAALKELDAAGVILVEESDGRGQKVFQDILRVWREHKDDE
SMLSVWGEASLVSAKDVIIPPRWDSEGKIRAVVDAAGESYEALLEASSWG
TEIEPPKVDMPTEQSRVERQELGKRKKEEYLRNFEAWTTRMQQVAEKAKQ
NPGNDVTQVDGAEANEKTPAQADFFQKLLAGTR*
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