Ggra2117.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2117.t1
Unique NameGgra2117.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length208
Homology
BLAST of Ggra2117.t1 vs. uniprot
Match: A0A2V3IZY5 (Protein SYS1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZY5_9FLOR)

HSP 1 Score: 303 bits (777), Expect = 8.600e-103
Identity = 152/186 (81.72%), Postives = 170/186 (91.40%), Query Frame = 0
Query:    1 MAVNGSFYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQIFNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAVPRDESRRSDNAKSQPIDLEAALNHESQQPPSSTS 186
            MAVNG+FYGR+RFDP+LILAQIVLLQA FYTSYL+LLV+FNYATGT+ SITDQ+FNH+YITLRHFPGWVTCTALLISA GPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNT MWWLLN++ATA L+TVGEA+SLRLELREIA+PRD   R+D  + QP D+EAALN  S +P SS+S
Sbjct:    1 MAVNGTFYGRDRFDPILILAQIVLLQASFYTSYLLLLVMFNYATGTTASITDQMFNHTYITLRHFPGWVTCTALLISAAGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTIMWWLLNIVATAALSTVGEAVSLRLELREIAIPRDNPTRTDK-RDQPTDIEAALNDHSSRPNSSSS 185          
BLAST of Ggra2117.t1 vs. uniprot
Match: A0A7S0ZK56 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK56_9RHOD)

HSP 1 Score: 117 bits (292), Expect = 3.580e-29
Identity = 61/164 (37.20%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    4 NGSFYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQIFNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSG-FPNTFMWWLLNMIATAGLATVGEAISLRL-ELREIAVPRDESRRSDNAKS 165
            +G+FYGRE F+P LIL  IVLLQ CFY SY +LL   N   G  +S+ +Q+F    +T    PGW T  + ++ + GP   A V  + RAK+C+D+  TL+I H +A T +SG  P  + WW + ++    ++   E + LRL ++REI++   ++   +++ S
Sbjct:   29 DGAFYGRESFNPWLILFHIVLLQFCFYISYSILLFTLNRMGGIQSSVVEQMFQPVLLTFSTIPGWFTICSFVLCSIGPYLTALVFFIRRAKKCLDYTVTLYIIHFVACTSYSGRIPTHWAWWFVIILTATIVSLSAEFLCLRLFDMREISLNTTQNNSKESSTS 192          
BLAST of Ggra2117.t1 vs. uniprot
Match: protein SYS1 homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D4387 (protein SYS1 homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D4387)

HSP 1 Score: 94.4 bits (233), Expect = 4.980e-21
Identity = 56/153 (36.60%), Postives = 90/153 (58.82%), Query Frame = 0
Query:    7 FYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQI--FNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAVPRDES 157
            FYG   +DP LI+AQIV LQ C Y  YL L +      GT  S    +  F+++ +T+    GW   T+ ++S+   A    V ++ RAK+C+DFA TL++ H+  + V+ G+P++  WW++N+   A +A +GE + ++ ELREI + R  S
Sbjct:    2 FYGAVVWDPWLIVAQIVCLQ-CLY--YLTLGIFMAGLVGTRVSRISLVYFFDYASVTVSTNTGWCVITSFILSSIAGAGY-LVYVIERAKKCLDFASTLYVIHLFTSLVYGGWPSSLTWWVVNVTGFAVMALLGEYLCIKRELREIPISRYRS 150          
BLAST of Ggra2117.t1 vs. uniprot
Match: A0A0E0JKN8 (Uncharacterized protein n=8 Tax=Poaceae TaxID=4479 RepID=A0A0E0JKN8_ORYPU)

HSP 1 Score: 94.0 bits (232), Expect = 7.010e-21
Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = 0
Query:    7 FYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQIFNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAVPR 154
            FYG   +DP LI++QIV LQ C Y   L LL+     T         +F+ + +T R   GW    A L++A   AA   + ++ RAK+C+DFA TL+I H+    V+ G+P +F WW++N+   A ++ +GE + +R EL+EI + R
Sbjct:    2 FYGAMVWDPWLIVSQIVCLQ-CLYYLALGLLMALLVGTRVPRLTLLYLFDFATLTPRTTTGWCVIAAFLLAAAAGAAF-MLHVIERAKKCLDFAATLYIIHLFICIVYGGWPASFTWWVVNIAGLAIMSLLGEYLCIRRELKEIPISR 147          
BLAST of Ggra2117.t1 vs. uniprot
Match: A0A0A0KC23 (Protein SYS1 homolog n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KC23_CUCSA)

HSP 1 Score: 93.2 bits (230), Expect = 1.390e-20
Identity = 56/150 (37.33%), Postives = 87/150 (58.00%), Query Frame = 0
Query:    7 FYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQI--FNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAVPR 154
            FYG   +DP LI+AQIV LQ CFY  YL L ++     GT  S    +  F+++ I++    GW    + L+SA   A    V L+ RAK+C+DFA TL+I H+    ++ G+P++  WW++N      ++ +GE + ++ ELREI + R
Sbjct:    2 FYGAVVWDPWLIVAQIVCLQ-CFY--YLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGWCVIASFLLSAIAGAGY-LVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITR 147          
BLAST of Ggra2117.t1 vs. uniprot
Match: protein SYS1 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8A2EC (protein SYS1 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8A2EC)

HSP 1 Score: 93.2 bits (230), Expect = 1.390e-20
Identity = 54/150 (36.00%), Postives = 87/150 (58.00%), Query Frame = 0
Query:    7 FYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQI--FNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAVPR 154
            FYG   +DP LI+AQIV +Q  +Y +  V + VF    GT  S    +  F+ + +TL    GW    + ++S+   A I  + L+ RAK+C+DFA TL+I H+    ++ G+P++  WW++N    A +A +GE + ++ ELREI + R
Sbjct:    2 FYGTVVWDPWLIVAQIVCIQCLYYITLGVFMGVF---VGTRVSKLSLVYFFDFATVTLSTVTGWCVIASFILSSVAGAGI-LLYLIERAKKCLDFAATLYIIHLFICILYGGWPSSITWWVVNGTGLAVMALLGEYLCIQRELREIPISR 147          
BLAST of Ggra2117.t1 vs. uniprot
Match: A0A830CU09 (Protein sys1 homolog n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CU09_9LAMI)

HSP 1 Score: 91.3 bits (225), Expect = 1.040e-19
Identity = 53/146 (36.30%), Postives = 83/146 (56.85%), Query Frame = 0
Query:    7 FYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQIFNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAV 152
            FYG   +DP LI+AQIV LQ  +Y S  + L +      T  S+    F+ + +T     GW    ++ +S+   A    V LV RAK+C+DFA TL+I H+  +  + G+P +  WW++N+ + A +A +GE + +R ELREI +
Sbjct:    2 FYGTVAWDPWLIVAQIVCLQCLYYISLGLFLSILVGPRVTKMSLV-YFFDFATVTASTSTGWCVVASIFLSSIAGAGF-LVYLVERAKKCLDFAATLYIIHLFISFSYGGWPTSVTWWVVNITSLAVMALLGEYLCMRRELREIPI 145          
BLAST of Ggra2117.t1 vs. uniprot
Match: A0A6S7MXJ5 (Protein SYS1 homolog n=4 Tax=Lactuca TaxID=4235 RepID=A0A6S7MXJ5_LACSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.000e-19
Identity = 50/153 (32.68%), Postives = 88/153 (57.52%), Query Frame = 0
Query:    7 FYGRERFDPLLILAQIVLLQACFYTS---YLVLLVVFNYATGTSTSITDQI--FNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAVPR 154
            FYG   +DP LI+AQI+ +Q  +Y +   ++ +LV      GT  S+   +  F+++ I++    GW    + ++S+   A    + L+ RAK+C+DFA TL+I H+    ++ G+P +  WW++N    A +A +GE + ++ ELREI + R
Sbjct:    2 FYGSVVWDPWLIVAQIICIQCLYYLTLGFFMAILV------GTRVSMMSLVYFFDYATISISTVTGWCVIASFILSSVAGAGF-LLYLIERAKKCLDFAATLYIIHLFICIIYGGWPTSITWWIVNGTGLALMALLGEYLCIKRELREIPISR 147          
BLAST of Ggra2117.t1 vs. uniprot
Match: A0A251RW17 (Putative integral membrane protein SYS1-related protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RW17_HELAN)

HSP 1 Score: 89.7 bits (221), Expect = 3.000e-19
Identity = 51/148 (34.46%), Postives = 86/148 (58.11%), Query Frame = 0
Query:    7 FYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQIFNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAVPR 154
            FYG   +DP LI+AQIV +Q  +Y +  V++ V   A  +  S+    F+++ +TL    GW   T+ ++S+   A    +  + RAK+C+DFA TL+I H+    ++ G+P++  WW++N    A  A +GE + ++ ELREI + R
Sbjct:    2 FYGSVVWDPWLIVAQIVCIQCLYYLTLGVIMTVLVGARVSRMSLV-YFFDYATVTLSTVTGWCVITSFILSSIAGAGF-LLYWIERAKKCLDFAATLYIIHLGICVLYGGWPSSITWWVVNGTGLAITALLGEYLCIKRELREIPISR 147          
BLAST of Ggra2117.t1 vs. uniprot
Match: protein SYS1 homolog n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0037 (protein SYS1 homolog n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0037)

HSP 1 Score: 90.5 bits (223), Expect = 3.820e-19
Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 0
Query:    4 NGSFYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSITDQIFNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFACTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREIAV 152
            +  FYG   +DP LI++QIV +Q   Y S   LL  F              F+H+ ++     GW   +A ++++   AA  FV LV RAK+C+DF+ T++I H++ ++++ GFP T  WWLL     A  A +GE + LR ELR+I +
Sbjct:   37 HTMFYGAAVWDPWLIVSQIVCIQCLSYVSLGALLWAF-VGVQVPRFTLHFFFDHTLLSFSSATGWCLISAFILNSLLVAAYLFV-LVERAKKCLDFSATVYIIHLVLSSIYGGFPLTVTWWLLMGTCLAVTALLGEWLCLRRELRDIPI 183          
The following BLAST results are available for this feature:
BLAST of Ggra2117.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZY58.600e-10381.72Protein SYS1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A7S0ZK563.580e-2937.20Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
protein SYS1 homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D43874.980e-2136.60protein SYS1 homolog n=2 Tax=Ipomoea TaxID=4119 Re... [more]
A0A0E0JKN87.010e-2137.16Uncharacterized protein n=8 Tax=Poaceae TaxID=4479... [more]
A0A0A0KC231.390e-2037.33Protein SYS1 homolog n=10 Tax=Cucurbitaceae TaxID=... [more]
protein SYS1 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8A2EC1.390e-2036.00protein SYS1 homolog n=1 Tax=Erigeron canadensis T... [more]
A0A830CU091.040e-1936.30Protein sys1 homolog n=1 Tax=Phtheirospermum japon... [more]
A0A6S7MXJ53.000e-1932.68Protein SYS1 homolog n=4 Tax=Lactuca TaxID=4235 Re... [more]
A0A251RW173.000e-1934.46Putative integral membrane protein SYS1-related pr... [more]
protein SYS1 homolog n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D00373.820e-1936.24protein SYS1 homolog n=1 Tax=Selaginella moellendo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019185Integral membrane protein SYS1-relatedPFAMPF09801SYS1coord: 10..151
e-value: 4.6E-31
score: 107.9
IPR019185Integral membrane protein SYS1-relatedPANTHERPTHR12952SYS1coord: 8..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..188
NoneNo IPR availablePANTHERPTHR12952:SF0PROTEIN SYS1 HOMOLOGcoord: 8..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..207
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..40
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 17..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:332710..333479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2117.t1Ggra2117.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 332710..333479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2117.t1 ID=Ggra2117.t1|Name=Ggra2117.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=208bp
MAVNGSFYGRERFDPLLILAQIVLLQACFYTSYLVLLVVFNYATGTSTSI
TDQIFNHSYITLRHFPGWVTCTALLISACGPAAIAFVALVGRAKRCIDFA
CTLFISHIIATTVHSGFPNTFMWWLLNMIATAGLATVGEAISLRLELREI
AVPRDESRRSDNAKSQPIDLEAALNHESQQPPSSTSLETESVALTQPHLF
ISAMLNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019185Integral_membrane_SYS1-rel