Ggra2076.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2076.t1
Unique NameGgra2076.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
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BLAST of Ggra2076.t1 vs. uniprot
Match: A0A2V3IIZ2 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIZ2_9FLOR)

HSP 1 Score: 87.8 bits (216), Expect = 1.020e-16
Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 0 
Query:  165 VSAEQRSKDKLAQRKLXXXXXXXXXXXXXXXXXRQLESYTRTLSEQNRELEMLHHKLLTLTCQRSMRAGPPLSDVAARVL 244
            VS EQ+ KDKLAQRKLXXXXXXXXXXXXXXXXXRQLE+YTRTLSEQNRELE+LHHKLLTLTCQRS+RA   L DV+  V+
Sbjct:  250 VSLEQKCKDKLAQRKLXXXXXXXXXXXXXXXXXRQLENYTRTLSEQNRELEILHHKLLTLTCQRSLRADQ-LGDVSGSVM 328
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BLAST of Ggra2076.t1 vs. uniprot
Match: R7QJF6 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJF6_CHOCR)

HSP 1 Score: 65.1 bits (157), Expect = 1.020e-8
Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:  172 KDKLAQRKLXXXXXXXXXXXXXXXXXRQLESYTRTLSEQNRELEMLHHKLLTLTCQRSMRA-GPPLSDVA 240
            KDKLA+RKL        XXXXXXXX RQLE+YTR+L+EQNRELE LH +LLTLTC+R MR    P + VA
Sbjct:  234 KDKLAKRKLRNKESARRXXXXXXXXRRQLENYTRSLTEQNRELENLHDRLLTLTCERRMRGLEVPFAQVA 303
The following BLAST results are available for this feature:
BLAST of Ggra2076.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIZ21.020e-1682.50BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QJF61.020e-864.29BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availableCDDcd14686bZIPcoord: 176..221
e-value: 2.10431E-7
score: 44.4585
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 172..218
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 178..192
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 172..215
score: 8.88685

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:108800..109534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2076.t1Ggra2076.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 108800..109534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2076.t1 ID=Ggra2076.t1|Name=Ggra2076.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MDLSVFDVLPPSPLFDDRVDDVLSANAAFMLDPFTATPSLADDCGLAPPR
TQLLLDPFDSPPIPLAPAAPPLSPAPCLAPFVAAADAALAVAPPLPASPE
LQQENVPANTRPAADRRCNAAARIGAPRRANAAPPVTAAFAAAAAAAGGA
GGAGGVSAAAVAAAVSAEQRSKDKLAQRKLRNKESARRYREKQVARRRQL
ESYTRTLSEQNRELEMLHHKLLTLTCQRSMRAGPPLSDVAARVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP