Ggra2076.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2076.t1
Unique NameGgra2076.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:108800..109534 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2076Ggra2076Gracilaria gracilis GNS1m malegenetig00000900_pilon 108800..109534 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2076.t1.stop1Ggra2076.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000900_pilon 108800..108802 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2076.t1.CDS1Ggra2076.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000900_pilon 108800..109534 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2076.t1.exon1Ggra2076.t1.exon1Gracilaria gracilis GNS1m maleexontig00000900_pilon 108800..109534 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2076.t1.start1Ggra2076.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000900_pilon 109532..109534 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2076.t1Ggra2076.t1Gracilaria gracilis GNS1m malepolypeptidetig00000900_pilon 108800..109534 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2076.t1 ID=Ggra2076.t1|Name=Ggra2076.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=245bp
MDLSVFDVLPPSPLFDDRVDDVLSANAAFMLDPFTATPSLADDCGLAPPR
TQLLLDPFDSPPIPLAPAAPPLSPAPCLAPFVAAADAALAVAPPLPASPE
LQQENVPANTRPAADRRCNAAARIGAPRRANAAPPVTAAFAAAAAAAGGA
GGAGGVSAAAVAAAVSAEQRSKDKLAQRKLRNKESARRYREKQVARRRQL
ESYTRTLSEQNRELEMLHHKLLTLTCQRSMRAGPPLSDVAARVL*
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spliced messenger RNA

>Ggra2076.t1 ID=Ggra2076.t1|Name=Ggra2076.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000900_pilon:108800..109534- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATCTGTCCGTGTTCGACGTGCTGCCGCCATCGCCGCTGTTCGACGA
TCGTGTCGACGACGTCCTTTCCGCCAACGCCGCCTTCATGCTGGACCCGT
TCACCGCCACGCCCTCACTCGCCGACGACTGCGGTCTGGCGCCGCCGCGC
ACGCAGCTGCTTCTGGACCCGTTCGACTCGCCGCCCATCCCGCTCGCCCC
CGCCGCCCCTCCGCTGTCGCCCGCGCCCTGCCTCGCGCCCTTCGTCGCCG
CCGCGGACGCTGCGCTCGCCGTGGCCCCACCGCTGCCCGCCTCGCCGGAG
CTGCAGCAGGAGAACGTGCCGGCCAACACACGCCCCGCCGCTGACAGGCG
TTGCAATGCCGCCGCGCGCATCGGCGCGCCGAGAAGGGCCAACGCTGCGC
CGCCCGTCACCGCCGCCTTCGCTGCGGCTGCGGCCGCGGCTGGCGGTGCT
GGCGGTGCTGGCGGTGTGAGCGCCGCGGCGGTGGCCGCCGCCGTGTCGGC
GGAACAGAGGTCGAAGGATAAGCTGGCGCAGAGGAAGTTGAGGAATAAGG
AGAGTGCTAGACGGTATCGCGAGAAGCAGGTGGCGAGGAGACGACAGCTG
GAGAGTTACACCAGGACGCTGTCGGAGCAGAACCGCGAGCTGGAGATGCT
GCATCACAAGTTGTTGACCTTGACGTGTCAGAGATCGATGCGTGCGGGCC
CACCGCTGTCGGATGTGGCTGCGCGTGTGTTGTGA
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protein sequence of Ggra2076.t1

>Ggra2076.t1 ID=Ggra2076.t1|Name=Ggra2076.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MDLSVFDVLPPSPLFDDRVDDVLSANAAFMLDPFTATPSLADDCGLAPPR
TQLLLDPFDSPPIPLAPAAPPLSPAPCLAPFVAAADAALAVAPPLPASPE
LQQENVPANTRPAADRRCNAAARIGAPRRANAAPPVTAAFAAAAAAAGGA
GGAGGVSAAAVAAAVSAEQRSKDKLAQRKLRNKESARRYREKQVARRRQL
ESYTRTLSEQNRELEMLHHKLLTLTCQRSMRAGPPLSDVAARVL*
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mRNA from alignment at tig00000900_pilon:108800..109534-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2076.t1 ID=Ggra2076.t1|Name=Ggra2076.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000900_pilon:108800..109534- (Gracilaria gracilis GNS1m male)
ATGGATCTGTCCGTGTTCGACGTGCTGCCGCCATCGCCGCTGTTCGACGA
TCGTGTCGACGACGTCCTTTCCGCCAACGCCGCCTTCATGCTGGACCCGT
TCACCGCCACGCCCTCACTCGCCGACGACTGCGGTCTGGCGCCGCCGCGC
ACGCAGCTGCTTCTGGACCCGTTCGACTCGCCGCCCATCCCGCTCGCCCC
CGCCGCCCCTCCGCTGTCGCCCGCGCCCTGCCTCGCGCCCTTCGTCGCCG
CCGCGGACGCTGCGCTCGCCGTGGCCCCACCGCTGCCCGCCTCGCCGGAG
CTGCAGCAGGAGAACGTGCCGGCCAACACACGCCCCGCCGCTGACAGGCG
TTGCAATGCCGCCGCGCGCATCGGCGCGCCGAGAAGGGCCAACGCTGCGC
CGCCCGTCACCGCCGCCTTCGCTGCGGCTGCGGCCGCGGCTGGCGGTGCT
GGCGGTGCTGGCGGTGTGAGCGCCGCGGCGGTGGCCGCCGCCGTGTCGGC
GGAACAGAGGTCGAAGGATAAGCTGGCGCAGAGGAAGTTGAGGAATAAGG
AGAGTGCTAGACGGTATCGCGAGAAGCAGGTGGCGAGGAGACGACAGCTG
GAGAGTTACACCAGGACGCTGTCGGAGCAGAACCGCGAGCTGGAGATGCT
GCATCACAAGTTGTTGACCTTGACGTGTCAGAGATCGATGCGTGCGGGCC
CACCGCTGTCGGATGTGGCTGCGCGTGTGTTGTGA
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Coding sequence (CDS) from alignment at tig00000900_pilon:108800..109534-

>Ggra2076.t1 ID=Ggra2076.t1|Name=Ggra2076.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=735bp|location=Sequence derived from alignment at tig00000900_pilon:108800..109534- (Gracilaria gracilis GNS1m male)
ATGGATCTGTCCGTGTTCGACGTGCTGCCGCCATCGCCGCTGTTCGACGA
TCGTGTCGACGACGTCCTTTCCGCCAACGCCGCCTTCATGCTGGACCCGT
TCACCGCCACGCCCTCACTCGCCGACGACTGCGGTCTGGCGCCGCCGCGC
ACGCAGCTGCTTCTGGACCCGTTCGACTCGCCGCCCATCCCGCTCGCCCC
CGCCGCCCCTCCGCTGTCGCCCGCGCCCTGCCTCGCGCCCTTCGTCGCCG
CCGCGGACGCTGCGCTCGCCGTGGCCCCACCGCTGCCCGCCTCGCCGGAG
CTGCAGCAGGAGAACGTGCCGGCCAACACACGCCCCGCCGCTGACAGGCG
TTGCAATGCCGCCGCGCGCATCGGCGCGCCGAGAAGGGCCAACGCTGCGC
CGCCCGTCACCGCCGCCTTCGCTGCGGCTGCGGCCGCGGCTGGCGGTGCT
GGCGGTGCTGGCGGTGTGAGCGCCGCGGCGGTGGCCGCCGCCGTGTCGGC
GGAACAGAGGTCGAAGGATAAGCTGGCGCAGAGGAAGTTGAGGAATAAGG
AGAGTGCTAGACGGTATCGCGAGAAGCAGGTGGCGAGGAGACGACAGCTG
GAGAGTTACACCAGGACGCTGTCGGAGCAGAACCGCGAGCTGGAGATGCT
GCATCACAAGTTGTTGACCTTGACGTGTCAGAGATCGATGCGTGCGGGCC
CACCGCTGTCGGATGTGGCTGCGCGTGTGTTGTGA
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