Ggra2061.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2061.t1
Unique NameGgra2061.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length240
Homology
BLAST of Ggra2061.t1 vs. uniprot
Match: A0A2V3IQS3 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS3_9FLOR)

HSP 1 Score: 134 bits (337), Expect = 1.890e-34
Identity = 95/245 (38.78%), Postives = 129/245 (52.65%), Query Frame = 0
Query:    1 MVYPGLHYLADEQLDPLGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATHARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTR------GVRHDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSVLRDG 239
            +VYPG   L +E    L R  A+VVGPGLGR D A   FE+VL  A+     LV+DADALW L+Q   L   +A++       + LTPN  EL RLL A    S   L   L  ++             V++AK   D + +  ++A ++   + KRVGGQGD+L+GLL ++A WM R      G  +  D        V AAVAAC++TR A   AFL+H    VASDAL  + +A+   + DG
Sbjct:   79 IVYPGFDALGNE-CTALARMHAIVVGPGLGRTDHAAEVFEKVLSYAIRSGTVLVIDADALWFLSQSPNLFAEIANS--AEGFHVYLTPNKVELDRLLIAAAVDSTVQLVKLLKGKA-------------VIIAKGNKDVIVSLNVQAEISTKASQKRVGGQGDILSGLLALYAFWMLRSRPLPCGPGYGVDGCL-----VTAAVAACSITRDATYQAFLKHRHGFVASDALAFVAEAVSKYVSDG 302          
BLAST of Ggra2061.t1 vs. uniprot
Match: R7Q760 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q760_CHOCR)

HSP 1 Score: 130 bits (327), Expect = 2.130e-32
Identity = 87/237 (36.71%), Postives = 125/237 (52.74%), Query Frame = 0
Query:    1 MVYPGLHYLADEQLDPLGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATHARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAA-VAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSVL 236
            +VYPG   L D+    L R  A+++GPGLGR + A    ++V+        PLV+DAD LW +A+  ELR  + +  P+    + LTPN  E+ RL +A ++  A                       VV+V K   D +        V++AG+LKRVGGQGD LAGL+ + + W+++       AS     A VA AV  C +TR AA  AFL+HGR+++ASD LP +  A+  VL
Sbjct:  142 IVYPGFDTLGDD-CKSLDRIHAIILGPGLGRSETAAAVVDKVVSYVCRQPKPLVIDADGLWFIAKSHELREKIRNGPPELQ--ITLTPNKVEMDRLQKAMNSSQA-------------ENVGKWFQGRVVLVGKGSSDQIFGENSYVEVSNAGSLKRVGGQGDFLAGLIALCSAWISKSTAFQDRASPDHAVAEVAPAVCGCVLTRTAAHRAFLKHGRSLLASDMLPSVGQAVHEVL 362          
BLAST of Ggra2061.t1 vs. uniprot
Match: A0A3B3SCK3 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SCK3_9TELE)

HSP 1 Score: 111 bits (278), Expect = 1.260e-25
Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 0
Query:   17 LGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATH---------ARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSV 235
            L R  +VVVGPGLGR D  +   + ++ ++ A  +P+V+DAD LW++AQ+  +     H  P+     +LTPN  E RRL  ATH          RSA  L+ A+G               + VV K   D +T        +  G+ +R GGQGD+L+G LGV A W        A+A+     A+ AA  ACT+TR+  R AF +HGR+M  SD LP +  A R +
Sbjct:  119 LPRLHSVVVGPGLGRDDKLLKNAKDIIEKSKARGIPVVIDADGLWLVAQQPAI----IHGYPK----AILTPNFMEFRRLYEATHHEPLDSSDIQRSALQLSVAMG--------------NLTVVLKGEEDIITNGNSVMVCSQEGSSRRCGGQGDLLSGSLGVLAHWA---YSSTAEATKGTSPAMVAAFGACTLTRQCNRQAFHKHGRSMTTSDMLPEIGSAFRKL 321          
BLAST of Ggra2061.t1 vs. uniprot
Match: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD66B33 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD66B33)

HSP 1 Score: 111 bits (278), Expect = 2.090e-25
Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 0
Query:   17 LGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATH---------ARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSV 235
            L R  +VVVGPGLGR D  +   + ++ ++ A  +P+V+DAD LW++AQ+  +     H  P+     +LTPN  E RRL  ATH          RSA  L+ A+G               + VV K   D +T        +  G+ +R GGQGD+L+G LGV A W        A+A+     A+ AA  ACT+TR+  R AF +HGR+M  SD LP +  A R +
Sbjct:  150 LPRLHSVVVGPGLGRDDKLLKNAKDIIEKSKARGIPVVIDADGLWLVAQQPAI----IHGYPK----AILTPNFMEFRRLYEATHHEPLDSSDIQRSALQLSVAMG--------------NLTVVLKGEEDIITNGNSVMVCSQEGSSRRCGGQGDLLSGSLGVLAHWA---YSSTAEATKGTSPAMVAAFGACTLTRQCNRQAFHKHGRSMTTSDMLPEIGSAFRKL 352          
BLAST of Ggra2061.t1 vs. uniprot
Match: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD63420 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD63420)

HSP 1 Score: 111 bits (278), Expect = 1.530e-24
Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 0
Query:   17 LGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATH---------ARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSV 235
            L R  +VVVGPGLGR D  +   + ++ ++ A  +P+V+DAD LW++AQ+  +     H  P+     +LTPN  E RRL  ATH          RSA  L+ A+G               + VV K   D +T        +  G+ +R GGQGD+L+G LGV A W        A+A+     A+ AA  ACT+TR+  R AF +HGR+M  SD LP +  A R +
Sbjct:  391 LPRLHSVVVGPGLGRDDKLLKNAKDIIEKSKARGIPVVIDADGLWLVAQQPAI----IHGYPK----AILTPNFMEFRRLYEATHHEPLDSSDIQRSALQLSVAMG--------------NLTVVLKGEEDIITNGNSVMVCSQEGSSRRCGGQGDLLSGSLGVLAHWA---YSSTAEATKGTSPAMVAAFGACTLTRQCNRQAFHKHGRSMTTSDMLPEIGSAFRKL 593          
BLAST of Ggra2061.t1 vs. uniprot
Match: A0A1D2AFS7 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AFS7_AUXPR)

HSP 1 Score: 104 bits (260), Expect = 1.210e-22
Identity = 83/224 (37.05%), Postives = 110/224 (49.11%), Query Frame = 0
Query:   17 LGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATHARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQR--AAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSVLRD 238
            L + DAVVVGPGLGR D  +    RVL+  +   +PLVVDAD LWM+     L +        + GA++LTPN  EL RL  A    +  A AA   A +              V+ K RVD       +    + G+L+RVGGQGDVL+G L  F  WM RG    A    RQ   AA+ A   +  + R+AA  A+   GRAM A D +  L   +  ++ D
Sbjct:  182 LPKFDAVVVGPGLGRDDLVLRTASRVLQEVVERGIPLVVDADGLWMVNSAPALVK-------GKHGAIVLTPNVVELGRLAEALGVEAKGADAARRLARALDGPA---------VLQKGRVDVAADAHGQLECEEPGSLRRVGGQGDVLSGCLAAFMAWMQRGQESWAGDGTRQGPPAALLACYGSSLIVRKAAHRAYACKGRAMGAPDLIDQLGPVVDDLVGD 389          
BLAST of Ggra2061.t1 vs. uniprot
Match: A0A0L0TAZ0 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0TAZ0_ALLM3)

HSP 1 Score: 102 bits (254), Expect = 5.500e-22
Identity = 87/235 (37.02%), Postives = 111/235 (47.23%), Query Frame = 0
Query:    4 PGLHYLADEQLDPLGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATHARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVAD-AGALKRVGGQGDVLAGLLGVFALWMTRGVR-HDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSVL 236
            P + +    QLD   R  A+VVGPGLGR    +     +L    A  +PLV+DADAL ++A R +L R    A        +LTPN  E  RL RA     + A    +G               V VV K   DAV      + V D  G L+R GGQGDVL G +  F  W    ++ HD +   R R  +AA VAAC VTR A+R+AF  HGR     D L +L  A   V+
Sbjct:  139 PDIIHRVASQLD---RFHAIVVGPGLGRDPLILNLVSLLLPEIRARFLPLVLDADALHLVATRPDLVRGYTRA--------VLTPNVVEYARLCRALELDPSEATPHEVG----------EALGGVTVVRKGAADAVARPGAESVVVDDQGGLRRFGGQGDVLTGAMAAFLAWNELAIKAHDGE-DRRDRWTIAACVAACAVTRTASRIAFEEHGRGTTTGDVLAVLPRAFSEVV 351          
BLAST of Ggra2061.t1 vs. uniprot
Match: A0A6A4X2W2 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4X2W2_AMPAM)

HSP 1 Score: 101 bits (252), Expect = 5.640e-22
Identity = 81/220 (36.82%), Postives = 110/220 (50.00%), Query Frame = 0
Query:   19 RADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATHARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSVLRD 238
            R  ++VVGPGLGR    +   +R++      ++P+V DADALW++AQ  +L R    A        +LTPNA E  RL +A        LA A   E             V +V K R DAV         ++ G+L+R GGQGD+LAG L     W T+         AR    + AA  AC +TRRA+R+AF RHGR+M+ASD L  +  A   +  D
Sbjct:  105 RLCSLVVGPGLGRDRRTLDTVQRLVEALRPLELPMVFDADALWLVAQAPDLVRGYHSA--------VLTPNAAEFGRLYKAVLHEE---LAVAHYGEQHVRALSRELGD-VAIVRKGRDDAVVCGDTALWCSEPGSLRRCGGQGDLLAGALATLLHW-TKTTNQPLAVDAR----LLAAYGACALTRRASRLAFERHGRSMLASDMLQHVHTAFEQLFED 307          
BLAST of Ggra2061.t1 vs. uniprot
Match: A0A1S3AJZ3 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3AJZ3_ERIEU)

HSP 1 Score: 96.7 bits (239), Expect = 1.690e-20
Identity = 75/219 (34.25%), Postives = 105/219 (47.95%), Query Frame = 0
Query:   17 LGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATHARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSV 235
            L R   +VVGPGLGR +  + + + +L  A A D+P+V+DAD LW++A++ +L R  A A        +LTPN  E RRL  A             G +             V V+ K   D V+           G+L+R GGQGD+LAG LGV   W         + S+     + AA+ AC +TRR +  AF +HGRA  ASD +  L  A   +
Sbjct:   56 LPRLHVLVVGPGLGRDEQLLASVKGILEAARARDLPVVIDADGLWLVARQPDLVRGYAKA--------VLTPNHVEFRRLREAVVRDDG-------GEDGEAVRGLSEALGGVTVLRKGERDLVSDGRQVLVCDQEGSLRRCGGQGDILAGSLGVLLHWALLAGPQKTNGSSPP---LLAALGACALTRRCSLRAFQKHGRATTASDMVAELGPAFHEL 256          
BLAST of Ggra2061.t1 vs. uniprot
Match: A0A1S3NYM2 (ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=10 Tax=Protacanthopterygii TaxID=41705 RepID=A0A1S3NYM2_SALSA)

HSP 1 Score: 97.1 bits (240), Expect = 4.020e-20
Identity = 76/228 (33.33%), Postives = 112/228 (49.12%), Query Frame = 0
Query:   17 LGRADAVVVGPGLGRGDDAVTAFERVLRRALADDMPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRATH---------ARSAAALAAALGAESXXXXXXXXXXXPVVVVAKARVDAVTARTLRASVADAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAAVAAAVAACTVTRRAARMAFLRHGRAMVASDALPLLRDALRSV 235
            L R  ++VVGPGLGR D  +   + V+ ++ A D+P+V+DAD LW++AQ+  +       +  + G  +LTPN  E  RL  A H          RSA  L+ A+G               + VV K   D +T           G+ +R GGQGD+L+G LGV A W        AD +     +V AA  AC++TR+  R AF +HGRA   +D +  +  A + +
Sbjct:  128 LPRLHSLVVGPGLGRDDKLLKNAKEVIEKSKARDIPIVIDADGLWLVAQQPSV------IQGYQKG--ILTPNYMEFTRLYEAMHHEPLDSSDHQRSAMELSVAMG--------------NLTVVLKGEEDLITDGNKVILCRQEGSGRRCGGQGDLLSGSLGVLAHWA---YTSSADMTKSVNPSVVAAFGACSLTRQCNRQAFHKHGRATTTTDMIQEISSAFKKL 330          
The following BLAST results are available for this feature:
BLAST of Ggra2061.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQS31.890e-3438.78ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 ... [more]
R7Q7602.130e-3236.71ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 ... [more]
A0A3B3SCK31.260e-2536.40ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 ... [more]
ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD66B332.090e-2536.40ATP-dependent (S)-NAD(P)H-hydrate dehydratase isof... [more]
ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD634201.530e-2436.40ATP-dependent (S)-NAD(P)H-hydrate dehydratase isof... [more]
A0A1D2AFS71.210e-2237.05ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 ... [more]
A0A0L0TAZ05.500e-2237.02ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 ... [more]
A0A6A4X2W25.640e-2236.82ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=2 ... [more]
A0A1S3AJZ31.690e-2034.25ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 ... [more]
A0A1S3NYM24.020e-2033.33ATP-dependent (S)-NAD(P)H-hydrate dehydratase n=10... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000631ATP-dependent (S)-NAD(P)H-hydrate dehydratasePFAMPF01256Carb_kinasecoord: 11..224
e-value: 1.0E-29
score: 103.7
IPR000631ATP-dependent (S)-NAD(P)H-hydrate dehydratasePROSITEPS51383YJEF_C_3coord: 1..235
score: 42.492359
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 1..236
e-value: 1.5E-36
score: 128.1
IPR029056Ribokinase-likeSUPERFAMILY53613Ribokinase-likecoord: 6..233
NoneNo IPR availablePANTHERPTHR12592ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBERcoord: 17..234
NoneNo IPR availablePANTHERPTHR12592:SF0ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASEcoord: 17..234
IPR017953Carbohydrate kinase, predicted, conserved sitePROSITEPS01050YJEF_C_2coord: 159..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:15915..16634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2061.t1Ggra2061.t1Gracilaria gracilis GNS1m malemRNAtig00000900_pilon 15915..16634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2061.t1 ID=Ggra2061.t1|Name=Ggra2061.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=240bp
MVYPGLHYLADEQLDPLGRADAVVVGPGLGRGDDAVTAFERVLRRALADD
MPLVVDADALWMLAQRAELRRLLAHARPQRAGALLLTPNAPELRRLLRAT
HARSAAALAAALGAESAAALGAESAAAPVVVVAKARVDAVTARTLRASVA
DAGALKRVGGQGDVLAGLLGVFALWMTRGVRHDADASARQRAAVAAAVAA
CTVTRRAARMAFLRHGRAMVASDALPLLRDALRSVLRDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000631CARKD
IPR029056Ribokinase-like
IPR017953Carbohydrate_kinase_pred_CS