Ggra2038.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2038.t1
Unique NameGgra2038.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length300
Homology
BLAST of Ggra2038.t1 vs. uniprot
Match: A0A2V3IJT9 (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT9_9FLOR)

HSP 1 Score: 207 bits (527), Expect = 1.500e-62
Identity = 99/123 (80.49%), Postives = 110/123 (89.43%), Query Frame = 0
Query:   41 RSPFRLRKRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVL 163
            + PFR+RKRIAVLGAR VGKSAVAIQCT  RFE EYMPTCED+FLWTT VDG  YEVTIVDTDGQDEFPD G+QYTIGVDGYILMFS+++E+SFHII+RVH+KLL TL VL PKGT ELPR+L
Sbjct:   47 QKPFRVRKRIAVLGARAVGKSAVAIQCTDNRFEPEYMPTCEDAFLWTTTVDGTKYEVTIVDTDGQDEFPDFGEQYTIGVDGYILMFSLVDESSFHIIRRVHEKLLQTLVVLDPKGTAELPRIL 169          
BLAST of Ggra2038.t1 vs. uniprot
Match: A0A2V3J3Y6 (GTP-binding protein Rheb-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Y6_9FLOR)

HSP 1 Score: 201 bits (511), Expect = 3.610e-60
Identity = 99/123 (80.49%), Postives = 107/123 (86.99%), Query Frame = 0
Query:   41 RSPFRLRKRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVL 163
            R+PF +RKRIAVLGAR VGKSAVAIQC   RFE EYMPTCED+FLWTTVVDG  YEVTIVDTDGQDEFPD G QYTIGVDGYILMFS++NE SF+IIKRVH+KLL TL VL  KGT ELPR+L
Sbjct:   47 RTPFYVRKRIAVLGARAVGKSAVAIQCAYNRFEPEYMPTCEDAFLWTTVVDGTNYEVTIVDTDGQDEFPDFGHQYTIGVDGYILMFSLVNENSFYIIKRVHEKLLETLIVLNRKGTKELPRIL 169          
BLAST of Ggra2038.t1 vs. uniprot
Match: A0A2V3J550 (CST complex subunit TEN1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J550_9FLOR)

HSP 1 Score: 181 bits (460), Expect = 2.780e-54
Identity = 87/124 (70.16%), Postives = 105/124 (84.68%), Query Frame = 0
Query:  166 MSAAVNMPDIKSGKLMQIDELDNWNPDERHGSAVRLIGRVKRVDFSRELVFIEYHGKQLAVHTALIADPVFGRDHIGTMLMCLGELERFENELLLRARIVKEMKDVDIDLYDRCLKIRKDFDKN 289
            MSAA NMPDIKSGKLMQ+ ELD+W PD+RHGSAVR+IGR+K +D+ R+L+FIEY  +QLAVHT  + +PVFG D IG + M LGELERF+NELLLRARI +E+  VD DLYDRCLK+RKDFDK+
Sbjct:    1 MSAA-NMPDIKSGKLMQLSELDDWKPDDRHGSAVRVIGRLKSLDYRRKLIFIEYRTRQLAVHTEQLGEPVFGSDQIGKLFMFLGELERFDNELLLRARIARELTGVDPDLYDRCLKVRKDFDKS 123          
BLAST of Ggra2038.t1 vs. uniprot
Match: R7QRP1 (Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP1_CHOCR)

HSP 1 Score: 134 bits (338), Expect = 2.310e-34
Identity = 67/121 (55.37%), Postives = 92/121 (76.03%), Query Frame = 0
Query:   43 PFRLRKRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVL 163
            PF + KRIAVLGARGVGKSA++I+    RFE  YM T +D + W  VV+   Y+V+I+DTDGQDE  + G +YT GVD Y+L+FSV +E+S+ +IK+V++KLL TL+V +  GT+E+PRVL
Sbjct:   41 PFYVFKRIAVLGARGVGKSALSIRVAQNRFEPNYMLTFQDMYQWRPVVNSVQYDVSILDTDGQDENSEFGMRYTTGVDAYVLVFSVRDESSYEVIKQVNEKLLVTLNVTERVGTSEVPRVL 161          
BLAST of Ggra2038.t1 vs. uniprot
Match: A0A671YAM6 (Ras homolog, mTORC1 binding n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671YAM6_SPAAU)

HSP 1 Score: 102 bits (255), Expect = 6.630e-23
Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 0
Query:   48 KRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVLLKMSAAVNMPDIKSGKLMQIDE----LDNWNPDERHGSA 198
            ++IAVLG R VGKS++ IQ   G+F   Y PT E++F  T  V+G  Y + +VDT GQDE+    Q YTI VDGYIL++SV +  SF +++ +H+KLL+ +      G  ++P +L     A N  D+   +++  +E     ++WN      SA
Sbjct:    7 RKIAVLGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKTMTVNGQEYNLQLVDTAGQDEYSIFPQSYTIDVDGYILIYSVTSYKSFEVVRVIHEKLLDMV------GNVQVPIIL-----AGNKKDLHMERVISFEEGKALAESWNAAFLESSA 150          
BLAST of Ggra2038.t1 vs. uniprot
Match: A0A4W6FVG1 (GTP-binding protein Rheb-like n=17 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A4W6FVG1_LATCA)

HSP 1 Score: 101 bits (252), Expect = 1.600e-22
Identity = 58/155 (37.42%), Postives = 90/155 (58.06%), Query Frame = 0
Query:   48 KRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVLLKMSAAVNMPDIKSGKLMQIDE----LDNWNPDERHGSA 198
            ++IAVLG R VGKS++ IQ   G+F   Y PT E++F  T  V+G  Y + +VDT GQDE+    Q YTI VDGYIL++SV +  SF +++ +H+KLL+ +      G  ++P +L+      N  D+   +++  +E     ++WN      SA
Sbjct:    7 RKIAVLGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKTMTVNGQEYNLQLVDTAGQDEYSIFPQSYTIDVDGYILIYSVTSYKSFEVVRVIHEKLLDMV------GNVQVPIILVG-----NKKDLHMERVISFEEGKALAESWNAAFLESSA 150          
BLAST of Ggra2038.t1 vs. uniprot
Match: GTP-binding protein Rheb isoform X6 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED7F806 (GTP-binding protein Rheb isoform X6 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED7F806)

HSP 1 Score: 100 bits (248), Expect = 3.200e-22
Identity = 56/140 (40.00%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   48 KRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVLLKMSAAVNMPDIKSGKLMQIDELD 187
            ++IAVLG R VGKS++ IQ   G+F   Y PT E++F  T  V+G  Y + +VDT GQDE+    Q YTI VDGYIL++SV +  SF +++ +H+KLL+ +      G  ++P +L+      N  D+   +  QI + D
Sbjct:    7 RKIAVLGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKTMTVNGQEYNLQLVDTAGQDEYSIFPQSYTIDVDGYILIYSVTSYKSFEVVRVIHEKLLDMV------GNVQVPIILVG-----NKKDLHMERATQIRQRD 135          
BLAST of Ggra2038.t1 vs. uniprot
Match: A0A5J4YYB2 (GTP-binding protein Rheb-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYB2_PORPP)

HSP 1 Score: 100 bits (250), Expect = 4.970e-22
Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 0
Query:   48 KRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVL 163
            +RIAVLGARGVGK++++ +     F+  Y+PT EDS+  T  ++   Y   ++DT GQDE+   G Q TIGV G+ L+FSV + TSF ++K ++DKLL TL      G + +PRVL
Sbjct:   21 RRIAVLGARGVGKTSMSTRFCENTFDDMYLPTIEDSYQATIRINNQQYICEVLDTAGQDEYSIFGTQLTIGVHGFFLVFSVRDRTSFELLKTINDKLLVTL------GASSIPRVL 130          
BLAST of Ggra2038.t1 vs. uniprot
Match: M2XFE0 (Small GTP-binding protein of Ras family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XFE0_GALSU)

HSP 1 Score: 100 bits (249), Expect = 6.940e-22
Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 0
Query:   46 LRKRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVLLKM 166
            L +RI VLG + VGKSA+ I+   G F S Y+PT ED++L T  ++G  Y + I+DT GQDE+  L  Q TIGV GY+L+F + +  SF ++K +H++L+N L      G   +P +L+ M
Sbjct:   18 LFRRIVVLGPKAVGKSALTIRFCEGIFHSSYLPTIEDTYLATLKLEGQIYNLEIIDTGGQDEYSILSSQCTIGVHGYLLVFDITDYLSFELLKVLHERLVNML------GLDTIPCILVGM 132          
BLAST of Ggra2038.t1 vs. uniprot
Match: A0A7N6F7K7 (GTP-binding protein Rheb-like n=6 Tax=Percomorphaceae TaxID=1489872 RepID=A0A7N6F7K7_ANATE)

HSP 1 Score: 99.8 bits (247), Expect = 8.510e-22
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 0
Query:   48 KRIAVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIVDTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDVLQPKGTTELPRVLLKMSAAVNMPDIKSGKLMQIDE----LDNWNPDERHGSA 198
            ++IAVLG R VGKS++ IQ   G+F   Y PT E++F     V+G  Y + +VDT GQDE+    Q YTI VDGYIL++SV +  SF +++ +H+KLL+ +      G  ++P +L+      N  D+   +++  +E     ++WN      SA
Sbjct:    7 RKIAVLGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKMMTVNGQEYNLQLVDTAGQDEYSIFPQSYTIDVDGYILIYSVTSYKSFEVVRVIHEKLLDMV------GNVQVPLILVG-----NKKDLHMERVISFEEGKALAESWNAAFLESSA 150          
The following BLAST results are available for this feature:
BLAST of Ggra2038.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJT91.500e-6280.49GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
A0A2V3J3Y63.610e-6080.49GTP-binding protein Rheb-like n=1 Tax=Gracilariops... [more]
A0A2V3J5502.780e-5470.16CST complex subunit TEN1 n=1 Tax=Gracilariopsis ch... [more]
R7QRP12.310e-3455.37Rheb1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7... [more]
A0A671YAM66.630e-2338.06Ras homolog, mTORC1 binding n=1 Tax=Sparus aurata ... [more]
A0A4W6FVG11.600e-2237.42GTP-binding protein Rheb-like n=17 Tax=Euacanthomo... [more]
GTP-binding protein Rheb isoform X6 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED7F8063.200e-2240.00GTP-binding protein Rheb isoform X6 n=1 Tax=Scatop... [more]
A0A5J4YYB24.970e-2245.69GTP-binding protein Rheb-like n=1 Tax=Porphyridium... [more]
M2XFE06.940e-2242.98Small GTP-binding protein of Ras family n=1 Tax=Ga... [more]
A0A7N6F7K78.510e-2236.77GTP-binding protein Rheb-like n=6 Tax=Percomorphac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 88..110
score: 30.88
coord: 71..87
score: 28.34
coord: 48..69
score: 32.33
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 44..205
e-value: 1.1E-11
score: 47.6
NoneNo IPR availableGENE3D2.40.50.140coord: 175..290
e-value: 1.1E-19
score: 72.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR24070:SF226GTP-BINDING PROTEIN RHEB HOMOLOGcoord: 47..164
IPR001806Small GTPasePFAMPF00071Rascoord: 50..149
e-value: 2.3E-20
score: 72.8
IPR001806Small GTPasePROSITEPS51421RAScoord: 42..291
score: 9.481079
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 43..173
e-value: 1.4E-26
score: 94.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 49..148
IPR029146CST complex subunit Ten1, animal and plant typePFAMPF15490Ten1_2coord: 175..288
e-value: 5.7E-19
score: 68.0
IPR020849Small GTPase, Ras-typePANTHERPTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYcoord: 47..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000030_piloncontigtig00000030_pilon:122409..125076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2038.t1Ggra2038.t1Gracilaria gracilis GNS1m malemRNAtig00000030_pilon 122409..125076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2038.t1 ID=Ggra2038.t1|Name=Ggra2038.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MSQVDVPNHDAPPPPPSPHTPPVAHLTAAARRLSAATPPPRSPFRLRKRI
AVLGARGVGKSAVAIQCTSGRFESEYMPTCEDSFLWTTVVDGNCYEVTIV
DTDGQDEFPDLGQQYTIGVDGYILMFSVLNETSFHIIKRVHDKLLNTLDV
LQPKGTTELPRVLLKMSAAVNMPDIKSGKLMQIDELDNWNPDERHGSAVR
LIGRVKRVDFSRELVFIEYHGKQLAVHTALIADPVFGRDHIGTMLMCLGE
LERFENELLLRARIVKEMKDVDIDLYDRCLKIRKDFDKNVLNAAERKSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR029146Ten1_animal_plant
IPR020849Small_GTPase_Ras-type