Ggra1985.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1985.t1
Unique Name	Ggra1985.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	358

Homology

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BLAST of Ggra1985.t1 vs. uniprot
Match: A0A2V3IZS8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS8_9FLOR)

HSP 1 Score: 310 bits (794), Expect = 2.640e-100
Identity = 235/385 (61.04%), Postives = 267/385 (69.35%), Query Frame = 0

Query:    1 MAAYQVDPDDLFSEDDSPPRAPTPVTFRRQPTQSTLQSTLRPLTLPPLGKSSFASRPQLNGTAPQYGRGGRPYESRPYEPRSRSREPXXXXXXXXXXXXNDRRS-SEPHDRSAGYSREPP-------------------SRP-------TKPVTFSRRKDESPPSDPKNSLSEAASILPEHTREKVLREXXXXXXXXXXXXXXPSRKRRPEVHAAKKAVLQNAKRSRQGQSFGLASLLAAASNSSSLIKLDPNRNKQHRDFRSTNERAVYAGVTMTKERKEREXXXRHDAEQRRIEEEEAVDEHFRQMRIQERNERRRLSKKWRLEETVAADMRHSYRLAKIERSLF-DPKDKDQVTLEGFGLRLHAIGEDPQVTEMWTIEIEDI 357
            MAAYQVDPD LFS++DSPPR   P   R QPTQS    TLRPLTLPPLG+SS  S+       P  GRG   YESRPY         XXXXXXXXXX   D RS +  + R+   SR PP                    RP       T P   ++ K    P  P +SLSEA SILPEHTREKVLREXXXXXXXXXXXXXX      PE  + KKAVLQNAKRSRQGQS GLASLLAAASNS+S+I+LDPNRN+ HR+ R+T+ERA Y GVTMTKERKEREXXXR +AE++RI+EE+AVDEHFRQMRIQERNERRRL+ KWR +ETVAA MRH YRLAKIERSLF DP DK++ +L   GL L +I ED  VTE+ TIE+E+I
Sbjct:    1 MAAYQVDPDALFSDEDSPPRETPPRIARPQPTQS----TLRPLTLPPLGRSSVFSKAPSLSNGPFSGRGRGKYESRPYX--XXXXXXXXXXXXXXXXHRQDGRSYNSAYSRATEQSRPPPLRGLSAYQRPNTSERSDVPQRPMGRGRAMTLPAHVTKNKKAESPKKP-DSLSEAVSILPEHTREKVLREXXXXXXXXXXXXXXXXXXXXPEDPSVKKAVLQNAKRSRQGQSMGLASLLAAASNSNSIIRLDPNRNRTHREHRATSERAFYEGVTMTKERKEREXXXRLEAERKRIDEEQAVDEHFRQMRIQERNERRRLADKWRRQETVAAGMRHVYRLAKIERSLFCDPNDKNKDSLSYLGLALRSIEEDATVTELMTIEVEEI 378

The following BLAST results are available for this feature:

BLAST of Ggra1985.t1 vs. uniprot

BLAST of Ggra1985.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IZS8	2.640e-100	61.04	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 246..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000925_pilon	contig	tig00000925_pilon:83774..84847 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1985.t1	Ggra1985.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000925_pilon 83774..84847 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1985.t1 ID=Ggra1985.t1|Name=Ggra1985.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=358bp
MAAYQVDPDDLFSEDDSPPRAPTPVTFRRQPTQSTLQSTLRPLTLPPLGK
SSFASRPQLNGTAPQYGRGGRPYESRPYEPRSRSREPRPYESRPHEPRQN
DRRSSEPHDRSAGYSREPPSRPTKPVTFSRRKDESPPSDPKNSLSEAASI
LPEHTREKVLREEEKRRAAAASERKRPSRKRRPEVHAAKKAVLQNAKRSR
QGQSFGLASLLAAASNSSSLIKLDPNRNKQHRDFRSTNERAVYAGVTMTK
ERKEREERERHDAEQRRIEEEEAVDEHFRQMRIQERNERRRLSKKWRLEE
TVAADMRHSYRLAKIERSLFDPKDKDQVTLEGFGLRLHAIGEDPQVTEMW
TIEIEDI*