Ggra1985.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1985.t1
Unique NameGgra1985.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length358
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000925_piloncontigtig00000925_pilon:83774..84847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1985Ggra1985Gracilaria gracilis GNS1m malegenetig00000925_pilon 83774..84847 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1985.t1.stop1Ggra1985.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000925_pilon 83774..83776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1985.t1.CDS1Ggra1985.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000925_pilon 83774..84847 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1985.t1.exon1Ggra1985.t1.exon1Gracilaria gracilis GNS1m maleexontig00000925_pilon 83774..84847 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1985.t1.start1Ggra1985.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000925_pilon 84845..84847 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1985.t1Ggra1985.t1Gracilaria gracilis GNS1m malepolypeptidetig00000925_pilon 83774..84847 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1985.t1 ID=Ggra1985.t1|Name=Ggra1985.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=358bp
MAAYQVDPDDLFSEDDSPPRAPTPVTFRRQPTQSTLQSTLRPLTLPPLGK
SSFASRPQLNGTAPQYGRGGRPYESRPYEPRSRSREPRPYESRPHEPRQN
DRRSSEPHDRSAGYSREPPSRPTKPVTFSRRKDESPPSDPKNSLSEAASI
LPEHTREKVLREEEKRRAAAASERKRPSRKRRPEVHAAKKAVLQNAKRSR
QGQSFGLASLLAAASNSSSLIKLDPNRNKQHRDFRSTNERAVYAGVTMTK
ERKEREERERHDAEQRRIEEEEAVDEHFRQMRIQERNERRRLSKKWRLEE
TVAADMRHSYRLAKIERSLFDPKDKDQVTLEGFGLRLHAIGEDPQVTEMW
TIEIEDI*
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spliced messenger RNA

>Ggra1985.t1 ID=Ggra1985.t1|Name=Ggra1985.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1074bp|location=Sequence derived from alignment at tig00000925_pilon:83774..84847- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGCCTACCAAGTCGACCCTGACGACCTTTTTTCAGAAGACGACAG
CCCTCCTCGAGCGCCCACTCCCGTAACCTTTCGTCGGCAACCAACACAAT
CTACCCTACAATCGACTTTGCGACCGCTCACTCTCCCTCCACTGGGCAAG
TCATCGTTTGCTTCAAGACCCCAGCTAAACGGCACTGCTCCGCAATATGG
ACGTGGCGGTCGTCCATATGAATCTCGTCCATACGAACCTCGTTCTCGTT
CACGCGAACCCCGTCCATATGAGTCTCGACCACATGAGCCTCGACAGAAT
GACAGACGTTCATCTGAACCCCACGATAGAAGTGCTGGATATTCTCGTGA
ACCACCATCACGGCCCACGAAACCAGTGACGTTTTCCAGGAGAAAAGATG
AATCTCCACCTTCCGACCCAAAGAACTCACTGTCCGAGGCTGCTTCTATT
TTACCAGAGCACACAAGAGAGAAAGTACTACGAGAGGAAGAAAAGAGACG
TGCGGCAGCGGCGTCAGAAAGGAAACGACCAAGCAGAAAGCGTCGCCCAG
AAGTCCATGCGGCGAAGAAAGCTGTGTTACAGAACGCAAAGCGCTCACGT
CAAGGCCAGTCCTTTGGGCTTGCATCCTTGCTTGCTGCCGCGTCTAACAG
CTCCTCGCTCATAAAGCTTGATCCTAACAGAAACAAGCAACACCGCGATT
TTCGTTCTACCAACGAACGCGCTGTATATGCAGGAGTTACCATGACCAAA
GAAAGGAAAGAGAGGGAAGAAAGAGAGCGACATGACGCAGAACAAAGGCG
TATTGAAGAAGAGGAAGCCGTTGACGAGCATTTCCGGCAGATGCGCATTC
AGGAAAGGAATGAGCGCAGGAGGCTGTCGAAGAAATGGCGCTTGGAAGAG
ACTGTTGCGGCTGACATGCGCCATTCGTATCGTCTTGCCAAGATAGAACG
TTCTCTTTTTGATCCGAAAGACAAGGACCAAGTTACCCTCGAAGGTTTTG
GATTAAGACTGCATGCTATCGGGGAAGACCCACAGGTCACTGAAATGTGG
ACCATCGAAATTGAAGACATCTAA
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protein sequence of Ggra1985.t1

>Ggra1985.t1 ID=Ggra1985.t1|Name=Ggra1985.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=358bp
MAAYQVDPDDLFSEDDSPPRAPTPVTFRRQPTQSTLQSTLRPLTLPPLGK
SSFASRPQLNGTAPQYGRGGRPYESRPYEPRSRSREPRPYESRPHEPRQN
DRRSSEPHDRSAGYSREPPSRPTKPVTFSRRKDESPPSDPKNSLSEAASI
LPEHTREKVLREEEKRRAAAASERKRPSRKRRPEVHAAKKAVLQNAKRSR
QGQSFGLASLLAAASNSSSLIKLDPNRNKQHRDFRSTNERAVYAGVTMTK
ERKEREERERHDAEQRRIEEEEAVDEHFRQMRIQERNERRRLSKKWRLEE
TVAADMRHSYRLAKIERSLFDPKDKDQVTLEGFGLRLHAIGEDPQVTEMW
TIEIEDI*
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mRNA from alignment at tig00000925_pilon:83774..84847-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1985.t1 ID=Ggra1985.t1|Name=Ggra1985.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1074bp|location=Sequence derived from alignment at tig00000925_pilon:83774..84847- (Gracilaria gracilis GNS1m male)
ATGGCTGCCTACCAAGTCGACCCTGACGACCTTTTTTCAGAAGACGACAG
CCCTCCTCGAGCGCCCACTCCCGTAACCTTTCGTCGGCAACCAACACAAT
CTACCCTACAATCGACTTTGCGACCGCTCACTCTCCCTCCACTGGGCAAG
TCATCGTTTGCTTCAAGACCCCAGCTAAACGGCACTGCTCCGCAATATGG
ACGTGGCGGTCGTCCATATGAATCTCGTCCATACGAACCTCGTTCTCGTT
CACGCGAACCCCGTCCATATGAGTCTCGACCACATGAGCCTCGACAGAAT
GACAGACGTTCATCTGAACCCCACGATAGAAGTGCTGGATATTCTCGTGA
ACCACCATCACGGCCCACGAAACCAGTGACGTTTTCCAGGAGAAAAGATG
AATCTCCACCTTCCGACCCAAAGAACTCACTGTCCGAGGCTGCTTCTATT
TTACCAGAGCACACAAGAGAGAAAGTACTACGAGAGGAAGAAAAGAGACG
TGCGGCAGCGGCGTCAGAAAGGAAACGACCAAGCAGAAAGCGTCGCCCAG
AAGTCCATGCGGCGAAGAAAGCTGTGTTACAGAACGCAAAGCGCTCACGT
CAAGGCCAGTCCTTTGGGCTTGCATCCTTGCTTGCTGCCGCGTCTAACAG
CTCCTCGCTCATAAAGCTTGATCCTAACAGAAACAAGCAACACCGCGATT
TTCGTTCTACCAACGAACGCGCTGTATATGCAGGAGTTACCATGACCAAA
GAAAGGAAAGAGAGGGAAGAAAGAGAGCGACATGACGCAGAACAAAGGCG
TATTGAAGAAGAGGAAGCCGTTGACGAGCATTTCCGGCAGATGCGCATTC
AGGAAAGGAATGAGCGCAGGAGGCTGTCGAAGAAATGGCGCTTGGAAGAG
ACTGTTGCGGCTGACATGCGCCATTCGTATCGTCTTGCCAAGATAGAACG
TTCTCTTTTTGATCCGAAAGACAAGGACCAAGTTACCCTCGAAGGTTTTG
GATTAAGACTGCATGCTATCGGGGAAGACCCACAGGTCACTGAAATGTGG
ACCATCGAAATTGAAGACATCTAA
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Coding sequence (CDS) from alignment at tig00000925_pilon:83774..84847-

>Ggra1985.t1 ID=Ggra1985.t1|Name=Ggra1985.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1074bp|location=Sequence derived from alignment at tig00000925_pilon:83774..84847- (Gracilaria gracilis GNS1m male)
ATGGCTGCCTACCAAGTCGACCCTGACGACCTTTTTTCAGAAGACGACAG
CCCTCCTCGAGCGCCCACTCCCGTAACCTTTCGTCGGCAACCAACACAAT
CTACCCTACAATCGACTTTGCGACCGCTCACTCTCCCTCCACTGGGCAAG
TCATCGTTTGCTTCAAGACCCCAGCTAAACGGCACTGCTCCGCAATATGG
ACGTGGCGGTCGTCCATATGAATCTCGTCCATACGAACCTCGTTCTCGTT
CACGCGAACCCCGTCCATATGAGTCTCGACCACATGAGCCTCGACAGAAT
GACAGACGTTCATCTGAACCCCACGATAGAAGTGCTGGATATTCTCGTGA
ACCACCATCACGGCCCACGAAACCAGTGACGTTTTCCAGGAGAAAAGATG
AATCTCCACCTTCCGACCCAAAGAACTCACTGTCCGAGGCTGCTTCTATT
TTACCAGAGCACACAAGAGAGAAAGTACTACGAGAGGAAGAAAAGAGACG
TGCGGCAGCGGCGTCAGAAAGGAAACGACCAAGCAGAAAGCGTCGCCCAG
AAGTCCATGCGGCGAAGAAAGCTGTGTTACAGAACGCAAAGCGCTCACGT
CAAGGCCAGTCCTTTGGGCTTGCATCCTTGCTTGCTGCCGCGTCTAACAG
CTCCTCGCTCATAAAGCTTGATCCTAACAGAAACAAGCAACACCGCGATT
TTCGTTCTACCAACGAACGCGCTGTATATGCAGGAGTTACCATGACCAAA
GAAAGGAAAGAGAGGGAAGAAAGAGAGCGACATGACGCAGAACAAAGGCG
TATTGAAGAAGAGGAAGCCGTTGACGAGCATTTCCGGCAGATGCGCATTC
AGGAAAGGAATGAGCGCAGGAGGCTGTCGAAGAAATGGCGCTTGGAAGAG
ACTGTTGCGGCTGACATGCGCCATTCGTATCGTCTTGCCAAGATAGAACG
TTCTCTTTTTGATCCGAAAGACAAGGACCAAGTTACCCTCGAAGGTTTTG
GATTAAGACTGCATGCTATCGGGGAAGACCCACAGGTCACTGAAATGTGG
ACCATCGAAATTGAAGACATCTAA
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