Ggra1898.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1898.t1
Unique NameGgra1898.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
BLAST of Ggra1898.t1 vs. uniprot
Match: A0A2V3IQ48 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ48_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 5.350e-43
Identity = 69/120 (57.50%), Postives = 84/120 (70.00%), Query Frame = 0
Query:    1 MNPTARRYARELDLSFVFGSRTDKEELHSLSDIMDQTNWTLVPTNQNAREKPRSDHFPGRTGPGGDFLWYYPWTSLQIDGEQAKNMCENPRAMPPTHSTGFLFEPASVSSGVRVDELNEV 120
            M  TARRYARE+DLSF+ GSR ++EE   L DI+DQ NW LVP  Q +R  P  DH PGR GPGGDF+WY PWT    DG QAK++ +NPRA+PPT  TG+LFEP  V+S   V E  ++
Sbjct:   18 MTRTARRYAREIDLSFILGSRANQEEFCRLLDIIDQVNWNLVPEEQISRRNPCIDHSPGRNGPGGDFIWYDPWTCQHTDGRQAKHLRKNPRAIPPTQPTGYLFEPMPVNSDALVHEYEDI 137          
BLAST of Ggra1898.t1 vs. uniprot
Match: A0A2V3IHU9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHU9_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 2.920e-35
Identity = 82/211 (38.86%), Postives = 114/211 (54.03%), Query Frame = 0
Query:    1 MNPTARRYARELDLSFVFGSRTDKEELHSLSDIMDQTNWTLVPTNQNAR--EKPRSDHFPGRTGPGGDFLWYYPWTSLQIDGEQAKNMCENPRAMPPTHSTGFLFEP-ASVSSGVRVDELNEVEYDDEEMENADINEPVLAVDDDVEPVLVPVSDTTPAPKALTSVVNEAELSVLKLFFIDFGVPFDQIPSGPQQMLSLL-------PNRP 201
            M+PTAR YAR LDLS V GSR ++E+   L ++MDQ NW LVP +Q AR     + ++ PGRT   GDF+WY PWT   +  EQA  + +NPRA P T  TG++FEP A+V   +  D   + +Y +   E  D   P+   D  V P+ V +    P   +     +E+EL +L+ F  + GVP   +    Q +L LL       PN P
Sbjct:   84 MSPTAREYARNLDLSLVLGSRANQEDFRHLMNVMDQINWDLVPADQAARGNRSRQREYSPGRTADAGDFVWYDPWTRQHLTSEQAPYLRQNPRAQPATQPTGYIFEPYAAVMDYMSED--GDADYSEGPYE-MDTEAPIPEEDTTVNPLPVNLGYQQPQQNSAD---DESELELLRRFLEEAGVPLTYVQGDRQHLLGLLRTNLGQDPNEP 288          
BLAST of Ggra1898.t1 vs. uniprot
Match: A0A2V3IEZ1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEZ1_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 1.330e-25
Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 MNPTARRYARELDLSFVFGSRTDKEELHSLSDIMDQTNWTLVPTNQNAREKPRSDHFPGRTGPGGDFLWYYPWTS 75
            M   AR Y RELDLSF+ GSR  +EE+  L DI++Q NWTLVP  Q++R  PR DH PGR GPGGDF WY PW S
Sbjct:   18 MTSMARHYGRELDLSFILGSRAKQEEIRRLLDIINQLNWTLVPAEQSSRINPRIDHSPGRNGPGGDFNWYGPWKS 92          
The following BLAST results are available for this feature:
BLAST of Ggra1898.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IQ485.350e-4357.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHU92.920e-3538.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEZ11.330e-2561.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000181_piloncontigtig00000181_pilon:159791..160423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1898.t1Ggra1898.t1Gracilaria gracilis GNS1m malemRNAtig00000181_pilon 159791..160423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1898.t1 ID=Ggra1898.t1|Name=Ggra1898.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MNPTARRYARELDLSFVFGSRTDKEELHSLSDIMDQTNWTLVPTNQNARE
KPRSDHFPGRTGPGGDFLWYYPWTSLQIDGEQAKNMCENPRAMPPTHSTG
FLFEPASVSSGVRVDELNEVEYDDEEMENADINEPVLAVDDDVEPVLVPV
SDTTPAPKALTSVVNEAELSVLKLFFIDFGVPFDQIPSGPQQMLSLLPNR
PGGSNLDTGS*
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