Ggra1889.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1889.t1
Unique NameGgra1889.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length257
Homology
BLAST of Ggra1889.t1 vs. uniprot
Match: A0A2V3IPY3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPY3_9FLOR)

HSP 1 Score: 366 bits (940), Expect = 1.950e-125
Identity = 178/245 (72.65%), Postives = 204/245 (83.27%), Query Frame = 0
Query:    5 TRRTFLRTAPS-LGALLLAESGDIQAELSALASKIPGAGMPDVFYPPFFLGEWLVTRELYAVEVQPGADELAGHALLSHRAIDAQREMIGQRDSFPAHFVLHRGHVIEDRQFNARAELDADNVSWDRTNPNVLSIAWGRTPGSTRIRECKITKRSFVDAPQGYGTFVSSEYARVVDVPSEAAFVTFSKKPSVYARRRLVRYRVSSVTDNMQPDGMDRIVVDYIYPPSPPDAKYALLLKYRDFLNR 248
            +RR  LR+ P+ +  LLLA+SGDIQAELSALAS IPGAGMPDV+YPPFF G+WLVTRELYAVE+  GA E+A H++LS RAIDA R  IG R++FP  FV HR H+I DR FN RAEL AD V WD  NPN++S+ WGR P   RIRECK+TKRSFVDAPQGYGTFVSSEYARVVDVPSE A ++ SK PSVY RRRLVRY+VSSV+D+MQPD +DRIVVDYIYPPSPP AKY++LLKYRDFLNR
Sbjct:   30 SRRDVLRSVPAAVIPLLLADSGDIQAELSALASHIPGAGMPDVYYPPFFQGDWLVTRELYAVEMSDGAVEIAAHSMLSGRAIDALRNRIGLRETFPVRFVSHRDHIIADRLFNTRAELGADQVLWDADNPNIISVTWGRAPAKKRIRECKLTKRSFVDAPQGYGTFVSSEYARVVDVPSEDALMSVSKAPSVYGRRRLVRYKVSSVSDSMQPDALDRIVVDYIYPPSPPGAKYSMLLKYRDFLNR 274          
BLAST of Ggra1889.t1 vs. uniprot
Match: L1JJI9 (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JJI9_GUITC)

HSP 1 Score: 92.4 bits (228), Expect = 1.110e-18
Identity = 65/223 (29.15%), Postives = 108/223 (48.43%), Query Frame = 0
Query:   35 ASKIPGAGMPDVFYPPFFLGEWLVTRELYAVEVQPGADELAGHALLSHRAIDAQREMIGQRDS---FPAHFVLHRGHVIEDRQFNARAELDADN-----VSWDRTNPNVLSIAWGRTPGSTRIRECKITKRSFVDAPQGYGTFVSSEYARVVDVPSEAAFVTFSKKPSVYARRRLVRYRVSSVTDNMQPDGMDRIVVDYIYPPSPPDAKYALL-LKYRDFLNR 248
            ASKIPG G  DVFYP  F G+W V R +  VE+    ++            D  ++++ ++D    +   ++      I DR++N R  L A++     V W  +NPNVL++++       RI E K+TKRS      G  T   +E+ R+  + +  +    +  P + AR    R+RV      +  D ++ I+++Y+ P + PD K A + +KY   L R
Sbjct:   65 ASKIPGFGPKDVFYPDSFRGKWNVERTITGVELLAAIEDQ-----------DLYKKVLSRKDKVEQYTTRYIPKEDGTIADREYNTRQLLAAEDEKGMDVQWSASNPNVLTVSYP----DGRIEERKVTKRSSSMGGDG-STAEFTEFVRIAQLQNAGSLTGVAPAPRISARWYRCRFRV------VDADTVESILLEYVLPDARPDPKDAWMKVKYISRLKR 265          
BLAST of Ggra1889.t1 vs. uniprot
Match: B8C094 (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C094_THAPS)

HSP 1 Score: 70.9 bits (172), Expect = 8.900e-11
Identity = 65/206 (31.55%), Postives = 99/206 (48.06%), Query Frame = 0
Query:   22 AESGDIQAE-LSALASK-IPGAGMPDVFYPPFFLGEWLVTRELYAVEVQPGAD---ELAGHALLSHRAIDAQREMIGQRDSFPAHFVLHRGHVIEDRQFNARAELDA-----------------DNVSWDRTNPNVLSIAWGRTPGSTRIRECKITKRSFVDAPQGYGTFVSSEYARVVDVPSEAAFVTFSKKPSVYARRRLVRYR 205
            A + +  AE +  L+SK +PG G PDV+YPP+F+G+W VTR +   E     D    L   + +     DA ++     ++F      +    I DR FN R+  +A                 + + W  TNPNVLS+++    GS++  E K+TKRS   +  G   F SSE+ R+  VP  AA       PS+Y  R L +++
Sbjct:    8 ASAAETPAEAIRILSSKTLPGLGPPDVYYPPYFVGKWKVTRLVTTSEDSFYKDVPLPLKVESEMRFVPYDAGKDF----ENFSGDNA-NDSPAIADRAFNERSFYNALASVLFSGPVPKSLPSINKLDWTPTNPNVLSMSYA--DGSSK--EVKVTKRSSDVSKSGDSVF-SSEFRRITAVP--AAGGVAGGIPSIYKSRVLTKWK 201          
BLAST of Ggra1889.t1 vs. uniprot
Match: A0A1X6P3B1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3B1_PORUM)

HSP 1 Score: 64.7 bits (156), Expect = 2.500e-8
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0
Query:  122 DADNVSWDRTNPNVLSIAWGRTPGSTRIRECKITKRSFVDAPQGYGTFVSSEYARVV---DVPSEAAF 186
            D+ + +W   NPNVL++  G   GSTR  E KITKRS+VD P GYGTFVSSEYAR+    +V  E  F
Sbjct:  279 DSVSTTWSPDNPNVLTVTAG---GSTR--EEKITKRSYVDEPGGYGTFVSSEYARIARLDEVVDEGGF 341          
The following BLAST results are available for this feature:
BLAST of Ggra1889.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IPY31.950e-12572.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
L1JJI91.110e-1829.15Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
B8C0948.900e-1131.55Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1X6P3B12.500e-854.41Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..256
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..35
score: 7.741196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000181_piloncontigtig00000181_pilon:95293..96063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1889.t1Ggra1889.t1Gracilaria gracilis GNS1m malemRNAtig00000181_pilon 95293..96063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1889.t1 ID=Ggra1889.t1|Name=Ggra1889.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=257bp
MCACTRRTFLRTAPSLGALLLAESGDIQAELSALASKIPGAGMPDVFYPP
FFLGEWLVTRELYAVEVQPGADELAGHALLSHRAIDAQREMIGQRDSFPA
HFVLHRGHVIEDRQFNARAELDADNVSWDRTNPNVLSIAWGRTPGSTRIR
ECKITKRSFVDAPQGYGTFVSSEYARVVDVPSEAAFVTFSKKPSVYARRR
LVRYRVSSVTDNMQPDGMDRIVVDYIYPPSPPDAKYALLLKYRDFLNRRS
TNQLLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal