Ggra1868.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1868.t2
Unique NameGgra1868.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length193
Homology
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BLAST of Ggra1868.t2 vs. uniprot
Match: A0A2V3IZ41 (Subtilisin-like protease 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ41_9FLOR)

HSP 1 Score: 97.8 bits (242), Expect = 1.960e-20
Identity = 69/176 (39.20%), Postives = 102/176 (57.95%), Query Frame = 0 
Query:    6 NSSSSLLSVSLTFTPGVSPAMTYSTIQVKRSLALLTGVKARWIVVRRAHGVTFQLNESEPEQVPLVFYISTHTKWASLYASRIKNTISSGRLIANSFENVTV-ASVEEAVKLNVTLPDVAPEVPDGLDNRSSDG--QGGINMQLFFKAMMVIFSIAVLVSVAIIAYSFEMWRVRRR 178
            NSSS L+SVSLT  PG+SPAMTYS  ++KR L+  TG++   I+VRRA GV    +  EP+ +PL++Y  T+ K+ SL+ +R + ++ S  L ++  ENVT   S E+ V   V LPD    +   L   SS+G  + GI++      M+ I  + V+  +A+ A      R RRR
Sbjct:  280 NSSSVLVSVSLTLIPGISPAMTYSATRIKRWLSTQTGIEETSILVRRAKGVHRLPDHKEPKHIPLMYYFPTNPKFTSLFVARARLSVDSRGLQSSILENVTFNGSSEDVVSQYVVLPDAV--IDSTLVGGSSNGGLENGIDV-----IMISIIGVCVVTVMALSALFVHCVRRRRR 448
The following BLAST results are available for this feature:
BLAST of Ggra1868.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ411.960e-2039.20Subtilisin-like protease 3 n=1 Tax=Gracilariopsis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..170
NoneNo IPR availableTMHMMTMhelixcoord: 150..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000907_piloncontigtig00000907_pilon:112479..113057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1868.t2Ggra1868.t2Gracilaria gracilis GNS1m malemRNAtig00000907_pilon 112479..113057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1868.t2 ID=Ggra1868.t2|Name=Ggra1868.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=193bp
MGVGENSSSSLLSVSLTFTPGVSPAMTYSTIQVKRSLALLTGVKARWIVV
RRAHGVTFQLNESEPEQVPLVFYISTHTKWASLYASRIKNTISSGRLIAN
SFENVTVASVEEAVKLNVTLPDVAPEVPDGLDNRSSDGQGGINMQLFFKA
MMVIFSIAVLVSVAIIAYSFEMWRVRRRRQRESEEAGLATEV*
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