Ggra1853.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1853.t1
Unique NameGgra1853.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length511
Homology
BLAST of Ggra1853.t1 vs. uniprot
Match: A0A2V3IWJ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWJ7_9FLOR)

HSP 1 Score: 271 bits (692), Expect = 2.500e-84
Identity = 142/204 (69.61%), Postives = 168/204 (82.35%), Query Frame = 0
Query:   81 APLPVPANAVHAPRAENGVTRATSPKKVLDRKRGRDDDGHCDSALA--TSSLSLNELDDYRNECIKLEKLRHARVYEADKRRLYHENVILTMYQMEVDAILDEFEQGKRAAMLKMLSDNAEKIRQVEELRCGICKDDMVGGWQRKHEMALRGRGVVDEEVDDGRP-ARRKRTRSNSVKVNVELDDHQVSDDLAEMRGEKRQREE 281
            +P PVP +A   P A      ++  K+ +DRKR R+DD H +      ++S+ L ELDDYRNEC+KLEK+RHARVYEADKRRLYHENVILTMY+MEV AI+DEFEQ KR+ +LKMLSDNAEK+RQVEELR GICKDD+VG WQRKHEM+LRGRG  D+++D+GR   RRKRTRS+SVKVNVELDDHQVSDDLAEMRGEKRQRE+
Sbjct:   60 SPPPVPQSAA-LPAAT--ALNSSPVKRHVDRKRLREDDAHANDTTTPPSNSICLTELDDYRNECLKLEKVRHARVYEADKRRLYHENVILTMYEMEVAAIIDEFEQAKRSVVLKMLSDNAEKMRQVEELRYGICKDDVVGAWQRKHEMSLRGRGGADDDLDEGRSHGRRKRTRSSSVKVNVELDDHQVSDDLAEMRGEKRQRED 260          
BLAST of Ggra1853.t1 vs. uniprot
Match: A0A6T6BZW3 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BZW3_9RHOD)

HSP 1 Score: 115 bits (288), Expect = 1.040e-23
Identity = 69/163 (42.33%), Postives = 99/163 (60.74%), Query Frame = 0
Query:  131 SLNELDDYRNECIKLEKLRHARVYEADKRRLYHENVILTMYQMEVDAILDEFEQGKRAAMLKMLSDNAEKIRQVEELRCGICKDDMVGGWQ-RKHEMALRGRGVVDEEVDDGRPA--------RRKRTRSNSVK-------VNVELDDHQVSDDLAEMRGEKR 277
            SLNEL   R +C++ E+ RH+R++EA+KRRLY E V+   Y  EV  + +E+E  +R   +++L +NA+K R+V+ELR  I +DD  G WQ RKHEM+LRGRG  D+ V +  PA        R+ R R   +        + VELD  +V  DL E+ GE+R
Sbjct:  427 SLNEL---REKCLESERARHSRIFEAEKRRLYAEQVVRWSYAHEVRLVEEEYESARRVLTVRLLQENADKQRRVDELRYKIFRDDPAGIWQHRKHEMSLRGRGDQDDHVFEEHPAAENHVEKVRQVRKRGGVLVSSEGTRGMRVELDASEVMADLEEIAGERR 586          
BLAST of Ggra1853.t1 vs. uniprot
Match: A0A7S2ZSR3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZSR3_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 2.830e-19
Identity = 63/176 (35.80%), Postives = 94/176 (53.41%), Query Frame = 0
Query:  130 LSLNELDDYRNECIKLEKLRHARVYEADKRRLYHENVILTMYQMEVDAILDEFEQGKRAAMLKMLSDNAEKIRQVEELRCGICKDDMVGGWQRKHEMALRGRGVVDE-------------------EVDDG--------RPAR-RKRTRSNSVKVNVELDDHQVSDDLAEMRGEKR 277
            + +  +++YR   I+LEK+RH R+Y+ +KR LY   ++   Y  EV     E+E  +R  M +++ +N E  R+VEELR  I +DD  G + RKHEM+LRGRG  D                    E D G        R +R R+R   +  +V VEL+  +V DDLAE+ G++R
Sbjct:  161 MEMGTIEEYRALRIRLEKIRHRRIYDGEKRLLYAHKLVKLNYDHEVRLADIEYENARRLLMQRLMQENMEHQRRVEELRYKIIRDDPHGVYPRKHEMSLRGRGAKDAGAHGAHDSSIIAGSHSTIIENDSGYTDQTHQDRGSRNRRRVSIDRARVRVELETGEVMDDLAEVFGDRR 336          
BLAST of Ggra1853.t1 vs. uniprot
Match: M2XKU0 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKU0_GALSU)

HSP 1 Score: 67.0 bits (162), Expect = 3.100e-8
Identity = 37/121 (30.58%), Postives = 69/121 (57.02%), Query Frame = 0
Query:  123 SALATSSLSLN--------ELDDYRNECIKLEKLRHARVYEADKRRLYHENVILTMYQMEVDAILDEFEQGKRAAMLKMLSDNAEKIRQVEELRCGICKDDMVGGWQ-RKHEMALRGRGVV 234
            SA+ T + S N         L++YR+  + LE++   +VYEA++ +LYH  V    Y+ +     +EFE G+R  + ++L +NA++ R++EEL+  I +D+     + R+H++  R R  +
Sbjct:  165 SAVKTKNTSSNTESKYVPGSLEEYRHRVLHLERIYLTKVYEAERAKLYHAQVAKINYEYDCQQAEEEFELGRRLLITRLLYENADRRRRIEELKYKIVRDENNSYLRLRRHDVGHRTRSTL 285          
The following BLAST results are available for this feature:
BLAST of Ggra1853.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IWJ72.500e-8469.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6T6BZW31.040e-2342.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZSR32.830e-1935.80Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2XKU03.100e-830.58Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..486

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:946626..948381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1853.t1Ggra1853.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 946626..948381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1853.t1 ID=Ggra1853.t1|Name=Ggra1853.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=511bp
MAHSPLRPESDRRSHQPLVVESTTVSEGGRFKHDSAPPAAPMGKRASAEA
RRRAKHDRDVKKEPNMLPVRPDAPNGIASAAPLPVPANAVHAPRAENGVT
RATSPKKVLDRKRGRDDDGHCDSALATSSLSLNELDDYRNECIKLEKLRH
ARVYEADKRRLYHENVILTMYQMEVDAILDEFEQGKRAAMLKMLSDNAEK
IRQVEELRCGICKDDMVGGWQRKHEMALRGRGVVDEEVDDGRPARRKRTR
SNSVKVNVELDDHQVSDDLAEMRGEKRQREEVMYSCLLPTAVLHASQFAA
RTPHEGGTEKGLLASLASASAAINAVADCNAVNSWVALLSRLAILDSRAN
GISPRRGRGNGDGVRGVVCDSKLSAVRNTPRGMGCWSHASDDDTLSRDEV
GDGDEDRENERVDGVCGGETVCGECGCGRAGGRLGGREGEGEREAAELDE
EMDGMMTGEEGGVVDGDEGALGDGDEGAFDDEDEGALGMLAKMWPARGLR
RRQLQQSDSV*
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