Ggra185.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra185.t1
Unique Name	Ggra185.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	423

Homology

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BLAST of Ggra185.t1 vs. uniprot
Match: A0A2V3IQM6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQM6_9FLOR)

HSP 1 Score: 432 bits (1111), Expect = 1.870e-146
Identity = 262/429 (61.07%), Postives = 308/429 (71.79%), Query Frame = 0

Query:    1 MANFLNNRKRRQSAAASLHMLAMSGDFNAQLQFNVAESLSILYETDPRRLIRKNAFEKAANSARRLFGNMEEMRTSAQTPWQKQQVALLDKRLTRAQENVLAHLSDPSSAATFILLSKFLGVSPELDQVYRADHSAKMDAAGFVAKTGMSFIPGAGPLLGTVSRTGMKIQSSQHSASRRKGEQVQFNHEVSNIVPPSSNGSGVSHSSFDQQRPASSSSQLQRRATAGSTQSRVSPNLQRRLQSSQSGQESFNTGGTRGRGSGRRSIPSRGRRIVRASRPRPQQPTRERGGPRRSIQN---------PLRPGAMSGEAGSDATQLSS-----GTRSTPRTRMQIPQQSEPREMSEDERHQMAVAMYKKQRKKLKMVLLLKARDKQAKGIAQGRGSGLAGSSSGERANPVLEQKKKEANSFLESVRENARK 415
            MA+F++NRKRRQSAAASLHMLAMSGD+NAQLQFNVAE+ SILYETD RRLIRKNAFEKAANS RRLFGNME+M+ SAQTPWQKQQVALL K L +A+ENVLAHLSD SS  TFILLSKFLGVSPEL+QV+R DHSAKMDAAGF+AKT  SFIPGAGP+LGT +RTGMKIQS++HS SRR+GE V F+HE SNIVP SS G G + SSF +Q   S  S++Q+RA+    +S VSPNL+R  +S QS   S      +G     R+     R    +S  RPQ+   ER  P R +QN           RP + S +  S     SS       +  P   +  PQ+    E+SE+ER+Q+AV MYKKQR+KLK VL+LKARD+QAKGIAQG+GS L  SSSG R NP LEQKKKEAN F   +REN RK
Sbjct:    1 MADFVHNRKRRQSAAASLHMLAMSGDYNAQLQFNVAEARSILYETDARRLIRKNAFEKAANSTRRLFGNMEQMQASAQTPWQKQQVALLQKLLAKARENVLAHLSDTSSQTTFILLSKFLGVSPELEQVHRPDHSAKMDAAGFIAKTSFSFIPGAGPILGTAARTGMKIQSTKHSTSRRRGEDVFFDHEASNIVPTSSMGPGSASSSFHEQSDVSQPSRIQQRASFRDPRSSVSPNLERHPRSFQSRPGSSRGSFAQGTRPTMRAEGPLKRAASSSSALRPQRSVGERAVPSRPVQNFEPRAAVTAQQRPPSASKDRASQRPIQSSLDQLKSNQGVPLEGLHAPQEPALPELSEEERYQLAVEMYKKQRQKLKTVLVLKARDRQAKGIAQGKGSSLQQSSSGRRKNPHLEQKKKEANMFFMRLRENVRK 429

[Close]

BLAST of Ggra185.t1 vs. uniprot
Match: A0A2V3IQL4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQL4_9FLOR)

HSP 1 Score: 76.3 bits (186), Expect = 1.010e-11
Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 0

Query:    1 MANFLNNRKRRQSAAASLHMLAMSGDFNAQLQFNVAESLSILYETDPRRLIRKNAFEKAANSARRLFGNMEEMRTSAQTPWQKQQVALLDKRLTRAQENVLAHLSDPSSAATFI-LLSKF 119
            M ++ N + R +    +L  LA+ GD+ A L  N+ E+  ILYET P+R+ + NA+  A  ++RRL GN+  M  +    WQ Q V+ L   L  A++N L   ++   A   + LLSKF
Sbjct:    1 MFSWKNQKDRDKHGLNALEQLALQGDYKATLSHNLTEAKLILYETQPKRVFKSNAYRAAVEASRRLIGNIAYMEHNVSEDWQHQVVSHLRHTLETARQNALGAAAENIGAREVVGLLSKF 120

The following BLAST results are available for this feature:

BLAST of Ggra185.t1 vs. uniprot

BLAST of Ggra185.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IQM6	1.870e-146	61.07	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IQL4	1.010e-11	35.83	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 403..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..334
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..21
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..422
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000158_pilon	contig	tig00000158_pilon:223308..224576 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra185.t1	Ggra185.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000158_pilon 223308..224576 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra185.t1 ID=Ggra185.t1|Name=Ggra185.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=423bp
MANFLNNRKRRQSAAASLHMLAMSGDFNAQLQFNVAESLSILYETDPRRL
IRKNAFEKAANSARRLFGNMEEMRTSAQTPWQKQQVALLDKRLTRAQENV
LAHLSDPSSAATFILLSKFLGVSPELDQVYRADHSAKMDAAGFVAKTGMS
FIPGAGPLLGTVSRTGMKIQSSQHSASRRKGEQVQFNHEVSNIVPPSSNG
SGVSHSSFDQQRPASSSSQLQRRATAGSTQSRVSPNLQRRLQSSQSGQES
FNTGGTRGRGSGRRSIPSRGRRIVRASRPRPQQPTRERGGPRRSIQNPLR
PGAMSGEAGSDATQLSSGTRSTPRTRMQIPQQSEPREMSEDERHQMAVAM
YKKQRKKLKMVLLLKARDKQAKGIAQGRGSGLAGSSSGERANPVLEQKKK
EANSFLESVRENARKKAQQQNA*