Ggra184.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra184.t1
Unique NameGgra184.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length413
Homology
BLAST of Ggra184.t1 vs. uniprot
Match: A0A2V3ITE7 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITE7_9FLOR)

HSP 1 Score: 284 bits (726), Expect = 1.110e-88
Identity = 159/390 (40.77%), Postives = 228/390 (58.46%), Query Frame = 0
Query:   13 ISSFPSEVLQRVFQIGVEEAWVSSMDKIEQHEHNVDEEXXXXXXXXESGNAHENNSGCFQRFTKGYNPFATLPELVTLLNCAEVCKTWADAIINKDFWHSVLSRGSFNDALAEPWKLGKRWNRLLKDVPVPILCMEEDLLSNIGKIHTSLRRGRDAFEVYILSNSEEKKQIFDAWSNLQPILQTNVPRLTITNQRIESGRDVIESTPVGFETIALKKWPLLQSLDIDFAQNGIVCREVMRDWGEFIRKTAEMLSADPPFPSLKNLVLSTHVDTAAARNVTLVAPHVDHFHLRISGYQDDSLLNNWDRLRNCGVLW--QFLEQNKRYRTYITPYCIHAFKWPGPKTMSEFEKGWRFMSFMATNSPDSGVLISERRNGKRCEILLTLDQFFQ 400
            +S+FP +VLQR+F IGV   +   + ++ +  H                +A +   G    F    + F  +PE+ TL+ CA+VCK W+DAII K FW S ++     +  AEPWKLG+RWN L   VPVPIL   +  LSNIGKI TS+RRGR +F VY+  +S+ +++   AW +L+P L+T    L ++N       D+     VGF+T+ L +WPLLQSLD+D A+NGI+   ++R   E   K   ++ A+ PFP LK L L T  +   A+ VTLVAP V+H  +  SGY +D    +     +C  +W  QFL+++K+YRT++TPY +HAF W GPK +      W + S   ++ PD GVLISERR+GK  E+  TL QFF+
Sbjct:    1 MSNFPCDVLQRIFSIGVS-IFSIGVREVWRPAHG-------EYAHLSVSSAEDVEGGYRLLFKPDRDDFRGIPEVFTLMQCAQVCKVWSDAIIEKRFWDSNVTT-MLGEQYAEPWKLGRRWNALFAHVPVPILGTMDQFLSNIGKIETSIRRGRPSFHVYLPLSSDRRRETIRAWCSLEPFLRTKALHLKVSNMTTGDD-DLFRGKRVGFKTLTLNEWPLLQSLDVDLAENGILSPAMVRSRTELDSKLEHVVRANLPFPCLKKLSLPTPPNGRGAQLVTLVAPKVEHCFIFNSGYSNDPPGGDM----HCNCIWHSQFLQEDKKYRTFVTPYFLHAFLWLGPKAIGYERWIWEWFS-RKSHCPDYGVLISERRDGKVYEVGFTLKQFFR 375          
BLAST of Ggra184.t1 vs. uniprot
Match: A0A2V3ISG1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISG1_9FLOR)

HSP 1 Score: 169 bits (427), Expect = 1.080e-46
Identity = 92/221 (41.63%), Postives = 135/221 (61.09%), Query Frame = 0
Query:  190 LQPILQTNVPRLTITNQRIESGRDVIESTPVGFETIALKKWPLLQSLDIDFAQNGIVCREVMRDWGEFIRKTAEMLSADPPFPSLKNLVLSTHVDTAAARNVTLVAPHVDHFHLRISGYQDDSLLNNWDRLRNCGVLWQFLEQNKRYRTYITPYCIHAFKWPGPKTMSEFEKGWRFMSFMATNSPDSGVLISERRNGKRCEILLTLDQFFQVEDLRAICVP 410
            ++P L+T    L +++     G D+     VGFET+ L +WPLLQSLD+D A+NGI+   ++    E   K   ++ A+PPFP LK L L TH +    + VTLVAP V+H  +    Y ++SL    D  RN  +  QFL+++K+Y+T++TPY +HAF WPGPK+  + +  W + S   + S D  +LISERR+G   E+ LT +QFF+ EDLR I +P
Sbjct:    1 MEPFLRTKALHLKVSDITT-GGDDLFGGQRVGFETLMLNEWPLLQSLDVDLAENGILTLAMVGSRTELDSKPEHVVRANPPFPCLKKLSLPTHPNGHGEQLVTLVAPKVEHCSIITYVYNNESL--GLDMHRNRILYSQFLQEDKKYKTFVTPYFLHAFLWPGPKSFGDKKWIWEWYS-RNSYSSDCEILISERRDGTVYEVRLTFEQFFEEEDLREISIP 217          
The following BLAST results are available for this feature:
BLAST of Ggra184.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITE71.110e-8840.77Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3ISG11.080e-4641.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000158_piloncontigtig00000158_pilon:218434..219672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra184.t1Ggra184.t1Gracilaria gracilis GNS1m malemRNAtig00000158_pilon 218434..219672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra184.t1 ID=Ggra184.t1|Name=Ggra184.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=413bp
MTDPLQDNIHLHISSFPSEVLQRVFQIGVEEAWVSSMDKIEQHEHNVDEE
EDQEDDDNESGNAHENNSGCFQRFTKGYNPFATLPELVTLLNCAEVCKTW
ADAIINKDFWHSVLSRGSFNDALAEPWKLGKRWNRLLKDVPVPILCMEED
LLSNIGKIHTSLRRGRDAFEVYILSNSEEKKQIFDAWSNLQPILQTNVPR
LTITNQRIESGRDVIESTPVGFETIALKKWPLLQSLDIDFAQNGIVCREV
MRDWGEFIRKTAEMLSADPPFPSLKNLVLSTHVDTAAARNVTLVAPHVDH
FHLRISGYQDDSLLNNWDRLRNCGVLWQFLEQNKRYRTYITPYCIHAFKW
PGPKTMSEFEKGWRFMSFMATNSPDSGVLISERRNGKRCEILLTLDQFFQ
VEDLRAICVPLE*
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