Ggra1821.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1821.t1
Unique NameGgra1821.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1821.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 21..217
e-value: 9.8E-14
score: 53.0
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 32..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:760496..761152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1821.t1Ggra1821.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 760496..761152 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1821.t1 ID=Ggra1821.t1|Name=Ggra1821.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MPASSGSKLSDIEHERFIGDCEHRIKRFNCDRSMINLATFLFFEPNRHGH
VEQAIQLCERAIKQYNSCVAMCVLAQHFYFEGSKEQKKRVIPLLESSIKI
RPLEASLYFLGKALFYGKFDETDKPRAINLLRRGVTMNQNHITLGSLAKM
CLLYPHKDVKKKEALEMFRKVIEIGKDPYHMRQLAKLYETGTPVLKACAK
CSLKWTRMAEEYEQSAGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf