Ggra1805.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1805.t1
Unique Name	Ggra1805.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	629

Homology

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BLAST of Ggra1805.t1 vs. uniprot
Match: A0A2V3IWK1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWK1_9FLOR)

HSP 1 Score: 870 bits (2247), Expect = 1.360e-312
Identity = 432/627 (68.90%), Postives = 510/627 (81.34%), Query Frame = 0

Query:    1 MTDSDPVHTLADSPELVLTVYAVVLTPLALYVYHDILDKRWRPVWRLSRYLVCYFLLYITSGSALIVYIVIQARYGQDYKEVGASALAFILGTYGAWRLVRLTRIIIAHHSLVKILQRIDRALTSGTGLQPVGLEYHLFRHPTTSKPSRLEHTQWRFETRHDFISSALFDDDYPGDNAARIRWLAFFGKRVVVLEDDAEECASRVALWMRLVLRRPRSEPWRLLTSTSPLVQGQTYRADLGEALRALISSGSAKQAPPHANPNPAQVLLNRIEKRGLTEVAVGFFWIASEMSSEEMSQVLAEMPPRWMRGVTQNGKQLMFELVMALILCEMPPPENQDMQWLLSLPVLDWKRGVENVKLRTVLSELCADAVCSVMGGLWSQSESPCQDEVRTIVRDGVLALQEATSSEQGFEGTNVGLTLLDLILTSYRSGYMAEQILGKALELELKRQNSKADEDVRIYKAEIVTGLYSILQKLGQDDSEEFHDSFSSLKSSWGVDENIKDVFFAIHERARMERRASFQFDEVTQSRCWYVSDRNCQCEDPASAFGTAYTTAMELAPLVVQMLRHCADQGGGICLLKGHANPDRSSEMWIEWKKTQAYDISGSAEGLSADMSGSGSNGKGSVAVSL 627
            MT ++ +  LADSPELV  VYA+VLTPLALYVYHDILD+RWRPVWRLSRYLV Y LLYI +GS L+ YIV+QARYG+DYKEVGASALA ILGTYGAWRLVRL RIIIAH SLVKILQRID +L + TGLQPVGLEYHLFRHP T  P RL+HT WR+E+RHDFISS+LFDDDYPGD AARIRWLA FG RVVVL+DDA+ECASRVALWMRLVLRRPRSEPWRLLTSTSPLVQGQ YRA LGEALRALI+ GSAK+AP HAN NPA+VLLN+  K  LTE  +GFFWIASEM  EEMSQVLAEMPPRWMRGVTQNGKQLMFELVM+LILCEMP P +  + W+LSLPVL+W+R V N+K+   +SE+CADAVC VM        SP ++E+  IVR GV ALQEATS E GF+G  VGL+L++LI  SYRSGY+AE++LGKALE ELKR + +    ++IYKAEIVTGL+SIL +LGQ+D+E++   FS +KS+W V+  I DVF A+ ERA+ E +ASF  DE+ QSRCW++ +RNCQCEDPA+AFGT++TTAME++PLV+ MLRH       + +LKGHANPDR +E W+ WK+TQAY++SGS E   ++  GSG    G V + L
Sbjct:    1 MTSAERMTELADSPELVFPVYALVLTPLALYVYHDILDRRWRPVWRLSRYLVAYILLYICAGSGLVFYIVVQARYGEDYKEVGASALALILGTYGAWRLVRLVRIIIAHRSLVKILQRIDCSLAAETGLQPVGLEYHLFRHPRTVLPLRLQHTHWRYESRHDFISSSLFDDDYPGDAAARIRWLACFGGRVVVLQDDADECASRVALWMRLVLRRPRSEPWRLLTSTSPLVQGQLYRAGLGEALRALITYGSAKEAPAHANLNPAEVLLNKFGKHALTEAGIGFFWIASEMGVEEMSQVLAEMPPRWMRGVTQNGKQLMFELVMSLILCEMPRPTDDGLNWILSLPVLEWRRDVANLKVWNKMSEICADAVCKVMPTYTLHGPSPPKEEIFEIVRQGVFALQEATSKEYGFQGDIVGLSLIELIRASYRSGYIAEKLLGKALESELKRHDYET-AGLQIYKAEIVTGLFSILLQLGQEDNEQYEACFSEMKSTWDVNPKIIDVFLALRERAKREMQASFYLDELAQSRCWFLGERNCQCEDPATAFGTSFTTAMEISPLVIHMLRHYIKNKPTVHILKGHANPDRYNEHWMRWKRTQAYELSGSGEATISESGGSGERAGGDVVLKL 626

The following BLAST results are available for this feature:

BLAST of Ggra1805.t1 vs. uniprot

BLAST of Ggra1805.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IWK1	1.360e-312	68.90	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 72..82
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 49..71
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..37
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 83..100
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 101..628
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 38..48
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 50..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000050_pilon	contig	tig00000050_pilon:682216..684102 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1805.t1	Ggra1805.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000050_pilon 682216..684102 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1805.t1 ID=Ggra1805.t1|Name=Ggra1805.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=629bp
MTDSDPVHTLADSPELVLTVYAVVLTPLALYVYHDILDKRWRPVWRLSRY
LVCYFLLYITSGSALIVYIVIQARYGQDYKEVGASALAFILGTYGAWRLV
RLTRIIIAHHSLVKILQRIDRALTSGTGLQPVGLEYHLFRHPTTSKPSRL
EHTQWRFETRHDFISSALFDDDYPGDNAARIRWLAFFGKRVVVLEDDAEE
CASRVALWMRLVLRRPRSEPWRLLTSTSPLVQGQTYRADLGEALRALISS
GSAKQAPPHANPNPAQVLLNRIEKRGLTEVAVGFFWIASEMSSEEMSQVL
AEMPPRWMRGVTQNGKQLMFELVMALILCEMPPPENQDMQWLLSLPVLDW
KRGVENVKLRTVLSELCADAVCSVMGGLWSQSESPCQDEVRTIVRDGVLA
LQEATSSEQGFEGTNVGLTLLDLILTSYRSGYMAEQILGKALELELKRQN
SKADEDVRIYKAEIVTGLYSILQKLGQDDSEEFHDSFSSLKSSWGVDENI
KDVFFAIHERARMERRASFQFDEVTQSRCWYVSDRNCQCEDPASAFGTAY
TTAMELAPLVVQMLRHCADQGGGICLLKGHANPDRSSEMWIEWKKTQAYD
ISGSAEGLSADMSGSGSNGKGSVAVSLW*