Ggra1791.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1791.t1
Unique NameGgra1791.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length358
Homology
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BLAST of Ggra1791.t1 vs. uniprot
Match: R7QQF4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQF4_CHOCR)

HSP 1 Score: 82.0 bits (201), Expect = 2.600e-14
Identity = 71/230 (30.87%), Postives = 112/230 (48.70%), Query Frame = 0 
Query:  103 SRAARAFEVALELRRLKIIRLGYSTSPTRKKKP----ELVIRRG-ARVVSGKHYWRG--VEEYVKRSERKETYKVRLVEKELHSDELDEIGTVDFKTKLEANGRLRDTLFKKFYDLLLVV---------------------------------------DQV-NKDIVLDYSKLLGKYGELSETRQPERVGATDRSEIGNVARRVASDACYYIWNPHGEFRTKDQVDLIN 285
            S+ AR F+VA  LR L ++R+G+S+ PT+        E+V+R+G A   SGK YWRG  V E+       +T++V LVE++LH+  LD  GT+++   L+AN +  +  ++ FY++ +                                         +QV N    ++++    ++  L        VGA D   IG VARRVA+DA  +I N    FRT++QV +IN
Sbjct:    5 SKYARVFKVARALRNLDVLRVGFSSDPTKITNGTSAWEVVLRKGVAYKSSGKEYWRGNVVNEHY--CSEVQTWQVHLVERKLHASMLDSFGTIEY---LDANQKSLNAAYQAFYEVAITAVGYRPMRENESPNETPPGDGYFVLPQAPQRSWATTRPETNQVRNGSAEVNFAPFFARWSGLPVQWIATMVGAEDMRPIGWVARRVAADAISFI-NTGKHFRTEEQVKVIN 228
The following BLAST results are available for this feature:
BLAST of Ggra1791.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QQF42.600e-1430.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..357
NoneNo IPR availableTMHMMTMhelixcoord: 49..68
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 80..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:637304..641837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1791.t1Ggra1791.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 637304..641837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1791.t1 ID=Ggra1791.t1|Name=Ggra1791.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=358bp
MAMNDHSIEEHLGVWADFVSFVLLCGAIATQGGIDPRRSVWGRSPVRNVL
NTLFVGLNIIFSAGRFIAEGVWVETGPREFLLISIIYSARWLWLYAAITK
SGSRAARAFEVALELRRLKIIRLGYSTSPTRKKKPELVIRRGARVVSGKH
YWRGVEEYVKRSERKETYKVRLVEKELHSDELDEIGTVDFKTKLEANGRL
RDTLFKKFYDLLLVVDQVNKDIVLDYSKLLGKYGELSETRQPERVGATDR
SEIGNVARRVASDACYYIWNPHGEFRTKDQVDLINDSVERAAGVYMGVPD
MGRDEMGREDRPVVCQEKDRNLSLSCALFPAYNNVFHKTKLRNIVFIPLS
YSEVDED*
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