Ggra1785.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1785.t1
Unique NameGgra1785.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length268
Homology
BLAST of Ggra1785.t1 vs. uniprot
Match: A0A2V3IJ62 (Translin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ62_9FLOR)

HSP 1 Score: 406 bits (1043), Expect = 3.480e-141
Identity = 198/267 (74.16%), Postives = 232/267 (86.89%), Query Frame = 0
Query:    1 MTEIGKVFDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRSADLSDGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGASIHIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASNSKKRPAESDIAPPARKANHTKDHMIVSPANEEKEAPLETAMTDDDLNGKGAKN 267
            M E+ KVFDSLSDAFAAQ+VIRERIRAKRDEA VVIH+AVRSV  L+ + DL++GIE  +KALL+TGPAVK IED LPS+PGCIHRYVDFWH QLQSI+M+CA++DALS G+LT+ DEIS KIGA I+IPLEH+LGGICQSL+ELTRLSRNRVIRQDYETP+ CFRFA  +FDGLKQLNLKNDFLRKKYDGVKYEVNHMENI+YDL+IR L SNSKKRPAE+DIAPP +++N  KD M++SPA +E+E   E+ MTD    GK +K+
Sbjct:    1 MAEVEKVFDSLSDAFAAQEVIRERIRAKRDEADVVIHAAVRSVHALIMTPDLAEGIEVVRKALLQTGPAVKTIEDALPSEPGCIHRYVDFWHQQLQSISMICAIIDALSDGSLTRHDEISTKIGAEIYIPLEHFLGGICQSLAELTRLSRNRVIRQDYETPVQCFRFAENIFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIVYDLSIRSLTSNSKKRPAETDIAPPPQRSNQVKDRMVLSPAMDERENHSESIMTDKSPPGKDSKS 267          
BLAST of Ggra1785.t1 vs. uniprot
Match: translin-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDCB9 (translin-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDCB9)

HSP 1 Score: 174 bits (442), Expect = 1.990e-50
Identity = 88/209 (42.11%), Postives = 124/209 (59.33%), Query Frame = 0
Query:    4 IGKVFDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTL-VRSADLSDGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGASIHIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGL 211
            I  +F  +    + QD  RERIR  RD A   + ++ R++ +L + +ADL          L   G A+ A+E   P +PG  ++Y D W   LQ    VC V++ +   TL   + +   +GAS+ +PLE YL G+C ++SEL RL+ NRV   DY TP  C  F++ VF+  KQLN +NDFLRKKYDG+KY+V  +E IMYDL+IRGL
Sbjct:   13 IEAIFGRVGTVLSRQDETRERIRDVRDSADAAVRASTRALASLHMATADLLAVANAVANTLPAVGAAIAAVEAACPDEPGAFYQYHDIWRESLQHAVYVCTVLEFVRTDTLASNERVVELLGASVRVPLEDYLWGVCHAVSELPRLAMNRVTIGDYATPKRCAVFSANVFEAFKQLNFRNDFLRKKYDGMKYDVKRIEEIMYDLSIRGL 221          
BLAST of Ggra1785.t1 vs. uniprot
Match: A0A6M2DFT8 (Translin n=1 Tax=Xenopsylla cheopis TaxID=163159 RepID=A0A6M2DFT8_9NEOP)

HSP 1 Score: 121 bits (303), Expect = 8.950e-30
Identity = 74/228 (32.46%), Postives = 113/228 (49.56%), Query Frame = 0
Query:    4 IGKVFDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRSADLSDGIEEAKKALLKTGPAVKA-IEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGAS-------IHIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASNSKKRPAESD 223
            I  +F+   D    +  +RE IR    +       A+  +Q +    ++        +ALL    A  A + DV+P  PG  +RY D W    Q ++ VC++V  L  G L + + ++  +G +        H+ +E +L G+ Q  SEL+R + N V   DY  P+   RF + +  G + LNLKND LRKKYD +KY+V  +E I+YDL IRGL     K   + D
Sbjct:    6 ISDIFNEFQDYIQREQELREIIRTIVKDIETASREAITILQVIHSDVEMIGDACLKTRALLMDAKAHYAKLVDVIP--PGQYYRYHDHWRFVTQRLSFVCSLVVFLEAGILIKRETVAEILGINGEAKKDKFHLDIEDFLMGLLQMSSELSRFAVNSVTNGDYSKPLLIARFVADLNAGFRLLNLKNDSLRKKYDALKYDVKKIEEIVYDLRIRGLIQKDSKESLQED 231          
BLAST of Ggra1785.t1 vs. uniprot
Match: A0A182J7D9 (Translin n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182J7D9_9DIPT)

HSP 1 Score: 120 bits (300), Expect = 4.610e-29
Identity = 74/233 (31.76%), Postives = 116/233 (49.79%), Query Frame = 0
Query:    2 TEIGKVFDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRS-ADLSDGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGASI------HIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASNSKKRPAESDIAPP 227
            + +  +FDS +D       +R  IR    +       A  ++Q +  S AD+S     A++         + + D++P   G  +RY D WH+  Q I  + A+   L  G L   D  +  +G  +      H+ +E YL GI Q  SEL+R + N VI  DYE P+   +F + +  G + LNLKND LRK++D +KY+V  +E I+YD++IRGL +     PA +    P
Sbjct:   24 SNVKNIFDSFNDYLVKDQELRTEIRDIVRDIDQAAKEAAIALQVIHSSIADVSAACATARERFETCRTGYQKLADLIPQ--GQYYRYNDHWHYMTQRIVFLIALTIYLEKGFLVTRDTAAEVLGLHVNQKDGFHLDIEDYLVGILQLASELSRYAVNSVILGDYEKPLTISKFVADLNSGFRLLNLKNDSLRKRFDALKYDVKKIEEIVYDISIRGLRAEGAPVPAVAAATAP 254          
BLAST of Ggra1785.t1 vs. uniprot
Match: M2Y744 (DNA/RNA-binding protein translin/TB-RBP-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y744_GALSU)

HSP 1 Score: 118 bits (296), Expect = 5.840e-29
Identity = 69/210 (32.86%), Postives = 115/210 (54.76%), Query Frame = 0
Query:    8 FDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRSADLSDGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQL-QSIAMVCAV--VDALSGGTLTQLDEI---SFKIGASIHIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGL 211
            F  L+D    +   RE +R  RD     + SA   V++L +  DLS  ++E  ++L +       ++  +P D    ++Y + W   L Q++A+ C V  +D      +  L+ I        +S+ I LE YL G+C  + EL+RLS NRV   D+E  +   +F+S V  G + LN +ND+LR+++DG+KY+V  +E ++YD++IRGL
Sbjct:    6 FFKLNDYLEKESQCRENLRECRDRCDAAVRSAAVLVESLHKERDLSSKLQELYESLREVASGFVRLQSNVPVDE--YYKYNELWRSSLSQAVAVGCLVYYLDCNQLADIFVLERIFCPKEPEASSVRIELEDYLVGVCNLVGELSRLSVNRVTIGDFEFAVKAAKFSSEVLAGFRLLNFRNDYLRRRFDGMKYDVKKLEEVVYDISIRGL 213          
BLAST of Ggra1785.t1 vs. uniprot
Match: U5ESR5 (Translin n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=U5ESR5_9DIPT)

HSP 1 Score: 118 bits (296), Expect = 7.710e-29
Identity = 73/229 (31.88%), Postives = 119/229 (51.97%), Query Frame = 0
Query:    2 TEIGKVFDSLSDAFAAQDVIRERIR---------AKRDEAHV-VIHSAVRSVQTLVRSADLSDGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGASI------HIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASN 214
            T +  +FDS ++  + +  +RE+IR         AK  ++H+ +IHS++  V T            EA+K           + +++P   G  +RY D WH   Q +  + A+   L  G L   + ++  +G  +      H+ +E YL G+ Q  SELTR + N V   DYE P+   +F S +  G + LNLKND LRK+YD +KY+V  +E ++YD++IRGL ++
Sbjct:    4 TIVKDIFDSFNNYLSDEQELREKIRDIVKEIDKAAKEAQSHLQIIHSSLTEVST---------SCLEARKQFDTVRENFTKLAEIIPK--GQYYRYNDHWHFVTQRLVFLIALTIFLEQGILVSRETVAEILGLHVSNVDGFHLDIEDYLLGLLQLASELTRYATNSVTLGDYEKPLQISKFVSDLNSGFRLLNLKNDGLRKRYDALKYDVKKIEEVVYDISIRGLRND 221          
BLAST of Ggra1785.t1 vs. uniprot
Match: A0A0K8WCU8 (Translin n=8 Tax=Endopterygota TaxID=33392 RepID=A0A0K8WCU8_BACLA)

HSP 1 Score: 118 bits (296), Expect = 1.040e-28
Identity = 72/227 (31.72%), Postives = 118/227 (51.98%), Query Frame = 0
Query:    6 KVFDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRSADLS---DGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGASI------HIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASNSKKRPAESD 223
            +VF +       +  IRE IR K  E   +   A  ++Q  +  +DLS   D  + A+K +       K + +++P   G  +RY D W +  Q +  + A+V  L  G L + + ++  +G  +      H+ +E YL GI Q  SEL+R + N V   DY+ P+    F + +  G + LNLKND LRK++D +KY+V  +E ++YD++IRGL  N   +P+  D
Sbjct:    8 EVFSNYQKYIDNEQEIRENIRIKVREIEQLAKEA--TIQLQIIHSDLSKIEDACQAARKQIASCAGVYKQLSEIIPD--GQYYRYSDHWTYITQRLVFLIAMVVYLEAGFLVKRETVAEMLGLQVSHTEGFHLDIEDYLMGILQMASELSRFATNSVTMGDYDRPLNISHFMANLNSGFRLLNLKNDGLRKRFDALKYDVKKIEEVVYDISIRGLR-NETTQPSTDD 229          
BLAST of Ggra1785.t1 vs. uniprot
Match: F2UCT0 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UCT0_SALR5)

HSP 1 Score: 115 bits (289), Expect = 7.510e-28
Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 0
Query:   81 PGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIG------ASIHIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASNSKKRP 219
            PG  +RY   W    Q    + A++  L+ G++ QL +I   +G      A  HI +E YL G+C   SELTRL+ N V   D+E P+   RF S ++D  K LNLKND LR+K+D +KY+V ++E ++YDL+IRGLA     +P
Sbjct:   77 PGEYYRYNMHWRWVTQQTVYLAALMTFLNDGSVIQLQDIQNLLGVTSNDPADFHIDVEDYLMGLCSLPSELTRLATNCVTMGDFERPVTISRFISNLYDAFKLLNLKNDSLRRKFDSLKYDVKNVEQVVYDLSIRGLAKAKPDQP 221          
BLAST of Ggra1785.t1 vs. uniprot
Match: translin isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D452E (translin isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D452E)

HSP 1 Score: 117 bits (294), Expect = 8.070e-28
Identity = 71/219 (32.42%), Postives = 108/219 (49.32%), Query Frame = 0
Query:    8 FDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRSADLSDGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGAS---IHIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASNSKKRPAESD 223
            F+ L         +RERIRA   E          SV  +  S  +SD IE+AK+ +         + +++   P   +RY   W  + Q++  + + +  L  GTL    E   K+G +     + +E YL GIC   +EL R   N+V   DYE P    +F   +    + LNL+NDFLRKK+DG+KY++  +E + YD+ IRGLA+N +    E D
Sbjct:   78 FEELRSQLEDSGKLRERIRAVAMEIESTTWLMHSSVLLIHHSISISDVIEKAKQQIGGLRELYNKLAEIIRECPDQYYRYHGDWRTETQTVVSLLSFIHWLETGTLLLHTEAEAKLGLNPTEFGLDVEDYLIGICFMSNELPRYVVNQVTAGDYECPRKVLKFLKDLHAAFRMLNLRNDFLRKKFDGMKYDLRRVEEVFYDVKIRGLATNGESAGKEGD 296          
BLAST of Ggra1785.t1 vs. uniprot
Match: V5GD89 (Translin n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GD89_ANOGL)

HSP 1 Score: 115 bits (288), Expect = 1.350e-27
Identity = 72/222 (32.43%), Postives = 111/222 (50.00%), Query Frame = 0
Query:    4 IGKVFDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRSADLSDGIEEAKKALLKTGP-------AVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAMVCAVVDALSGGTLTQLDEISFKIGAS----IHIPLEHYLGGICQSLSELTRLSRNRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHMENIMYDLTIRGLASN 214
            I  +F    +   ++  +RE IR    +    I   +R + T+++       IE+  +A LK            +A+   +P  PG  +RY D W    Q +  + A++  L  G L   +  S  +G +    IH+ LE YL G+    SEL R + N V   DYE P+   RF + +  G + LNLKND LRK++D +KY+V  +E ++YDL+IRGLA N
Sbjct:    8 IANIFSPFQEYINSEQDVREEIRKIMKD----IEKPLREITTVLQVIHHDQDIEKMHRACLKARELFDDVRKGYEALNSTVP--PGQYYRYNDHWRFATQRLCFLAALIIFLEKGILIDKETTSQILGVNGKTNIHLDLEDYLMGLLNLASELARYAVNSVTYGDYERPLQISRFVAELNAGFRLLNLKNDSLRKRFDALKYDVKKIEEVVYDLSIRGLAHN 223          
The following BLAST results are available for this feature:
BLAST of Ggra1785.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJ623.480e-14174.16Translin n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
translin-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDCB91.990e-5042.11translin-like n=1 Tax=Mercenaria mercenaria TaxID=... [more]
A0A6M2DFT88.950e-3032.46Translin n=1 Tax=Xenopsylla cheopis TaxID=163159 R... [more]
A0A182J7D94.610e-2931.76Translin n=1 Tax=Anopheles atroparvus TaxID=41427 ... [more]
M2Y7445.840e-2932.86DNA/RNA-binding protein translin/TB-RBP-like prote... [more]
U5ESR57.710e-2931.88Translin n=1 Tax=Corethrella appendiculata TaxID=1... [more]
A0A0K8WCU81.040e-2831.72Translin n=8 Tax=Endopterygota TaxID=33392 RepID=A... [more]
F2UCT07.510e-2841.38Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
translin isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D452E8.070e-2832.42translin isoform X1 n=3 Tax=Olea europaea var. syl... [more]
V5GD891.350e-2732.43Translin n=1 Tax=Anoplophora glabripennis TaxID=21... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016069Translin, C-terminalGENE3D1.20.58.200Translin; domain 2coord: 128..221
e-value: 2.0E-28
score: 100.2
IPR016068Translin, N-terminalGENE3D1.20.58.190Translin; domain 1coord: 1..127
e-value: 2.0E-10
score: 42.8
IPR002848Translin familyPFAMPF01997Translincoord: 41..210
e-value: 3.4E-23
score: 82.7
IPR002848Translin familyPANTHERPTHR10741TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN Xcoord: 6..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..267
IPR033956TranslinPANTHERPTHR10741:SF2TRANSLINcoord: 6..213
IPR033956TranslinCDDcd14819Translincoord: 13..210
e-value: 1.76949E-45
score: 149.989
IPR036081Translin superfamilySUPERFAMILY74784Translincoord: 6..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:616476..617279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1785.t1Ggra1785.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 616476..617279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1785.t1 ID=Ggra1785.t1|Name=Ggra1785.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=268bp
MTEIGKVFDSLSDAFAAQDVIRERIRAKRDEAHVVIHSAVRSVQTLVRSA
DLSDGIEEAKKALLKTGPAVKAIEDVLPSDPGCIHRYVDFWHHQLQSIAM
VCAVVDALSGGTLTQLDEISFKIGASIHIPLEHYLGGICQSLSELTRLSR
NRVIRQDYETPIACFRFASYVFDGLKQLNLKNDFLRKKYDGVKYEVNHME
NIMYDLTIRGLASNSKKRPAESDIAPPARKANHTKDHMIVSPANEEKEAP
LETAMTDDDLNGKGAKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016069Translin_C
IPR016068Translin_N
IPR002848Translin_fam
IPR033956Translin
IPR036081Translin_sf