Ggra1760.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1760.t1
Unique NameGgra1760.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length238
Homology
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BLAST of Ggra1760.t1 vs. uniprot
Match: A0A2V3IWG2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWG2_9FLOR)

HSP 1 Score: 304 bits (779), Expect = 4.750e-102
Identity = 151/231 (65.37%), Postives = 185/231 (80.09%), Query Frame = 0 
Query:    6 VNTSIPDLLQRPPNQNISNLTLIRDSTDAADALPLLHHLVRALALSKQLPRSKILFLTTNSRAQIPTNSELCRFPFLTRASQVAFSHSTPCDPYTVFEDVHEEQAKSDVTKNFLRFISASVNKTNPQVLVVECIHALEMVFSVDVVPFIKSLTCVNGALSVILSAPVQCGIDDHIATLADMADTVIDLNNLQTGYAHDVDGNISVVKQQGKWQLQAKPRRYKVTEPSFKIY 236
            ++T    LL  P   +  N+TLIRD+TDAADALPLLHHLVR L+LSK L   +ILFLTTNSRAQIP  S+ C FPFLTR++Q+AF+HSTPCDPYT FE  HE+Q+ +  TK FLRF+SA+   ++ +V+VVEC+HAL+ VF+VD++PFIK+LT +   LSV+LSAPV CGID  IATLADMADT+IDLNNLQTGYA DVDG + +VKQQGKWQL +   RYK+TEPSFKIY
Sbjct:    1 MSTKTLQLLHWPSILSAKNVTLIRDATDAADALPLLHHLVRVLSLSKHLSPPEILFLTTNSRAQIPPTSKTCLFPFLTRSTQIAFAHSTPCDPYTFFEHPHEKQSSAQSTKQFLRFVSAAAKTSSAKVIVVECVHALQTVFAVDILPFIKTLTTMQKGLSVMLSAPVHCGIDRQIATLADMADTIIDLNNLQTGYAPDVDGTLKLVKQQGKWQLNSSTNRYKITEPSFKIY 231
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BLAST of Ggra1760.t1 vs. uniprot
Match: R7QJN6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJN6_CHOCR)

HSP 1 Score: 100 bits (249), Expect = 1.050e-23
Identity = 49/98 (50.00%), Postives = 70/98 (71.43%), Query Frame = 0 
Query:  140 HALEMVFSVDVVPFIKSLTCVNGALSVILSAPVQCGIDDHIATLADMADTVIDLNNLQTGYAHDVDGNISVVKQQGKWQLQAKPRRYKVTEPSFKIYS 237
            ++L+ VF VD   F++SL      LSVI + P+ CGID+ IA LAD++D+V D+++LQTG A+D+DG + V K  G+WQ   K +RY+VTE SFKIY+
Sbjct:    2 YSLKAVFGVDPSAFVRSLIAPGTNLSVISACPMGCGIDEDIADLADISDSVCDMHDLQTGAANDIDGMLRVAKNAGRWQPSLKAQRYQVTEASFKIYT 99
The following BLAST results are available for this feature:
BLAST of Ggra1760.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IWG24.750e-10265.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJN61.050e-2350.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 78..236
e-value: 2.2E-8
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:561530..562243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1760.t1Ggra1760.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 561530..562243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1760.t1 ID=Ggra1760.t1|Name=Ggra1760.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=238bp
MDLTNVNTSIPDLLQRPPNQNISNLTLIRDSTDAADALPLLHHLVRALAL
SKQLPRSKILFLTTNSRAQIPTNSELCRFPFLTRASQVAFSHSTPCDPYT
VFEDVHEEQAKSDVTKNFLRFISASVNKTNPQVLVVECIHALEMVFSVDV
VPFIKSLTCVNGALSVILSAPVQCGIDDHIATLADMADTVIDLNNLQTGY
AHDVDGNISVVKQQGKWQLQAKPRRYKVTEPSFKIYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase