Ggra1745.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1745.t1
Unique NameGgra1745.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length268
Homology
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A2V3IMQ0 (50S ribosomal protein L15 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMQ0_9FLOR)

HSP 1 Score: 400 bits (1028), Expect = 6.690e-139
Identity = 195/255 (76.47%), Postives = 221/255 (86.67%), Query Frame = 0
Query:   13 SLIYVRGLRTAASRPVVKDLTKHMQGMALKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNSVALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCVRRIKDGLRLIKGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHRYLDEDKDGVPIRILKEHQDIEQMIKDWPRLIHRREAKAKH 267
            +LI+ R    +A+ P +KDLTKH++  AL LS+I DNPGARKKEVR+GRGRGSGCGKTSGRGQKGQRARNSV LGFEGGQTPLQKRFPKVRTYDPFAKDI  VTLGRIQRFVDTGRLD NAEIGL QLV SGCVRRIKDGLRL++GGPG+CS L +RV+EC+P AAE+V+ KGGQ+CLA+YNKLGIR  VKPFKWTDQGLPLPRFA+PPPK  HRY D D DGVPIRILK  +DIE M  +WPR +H+REAKA++
Sbjct:   13 ALIFRRDYFRSANEPRIKDLTKHLRPSALSLSDIQDNPGARKKEVRLGRGRGSGCGKTSGRGQKGQRARNSVRLGFEGGQTPLQKRFPKVRTYDPFAKDIIDVTLGRIQRFVDTGRLDANAEIGLKQLVDSGCVRRIKDGLRLVEGGPGSCSSLRVRVTECSPVAAERVVEKGGQVCLAWYNKLGIRATVKPFKWTDQGLPLPRFARPPPKVEHRYPDRDDDGVPIRILKHRKDIEVMTNEWPRPVHQREAKARY 267          
BLAST of Ggra1745.t1 vs. uniprot
Match: 50S ribosomal protein L15-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5F92 (50S ribosomal protein L15-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5F92)

HSP 1 Score: 238 bits (606), Expect = 5.770e-75
Identity = 119/211 (56.40%), Postives = 162/211 (76.78%), Query Frame = 0
Query:   13 SLIYVRGLRTAASRPVVKDLTKHMQGMALKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNSVALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCVRRIKDGLRLIKGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPK 223
            SL + R +  +A+  VV+ +   + G  L+L+NI D  GARKK+VRVGRGRGSGCGKTSGRGQKGQRARNSV LGFEGGQTPLQKR PK+  +DPFA+ ++ +++GR+Q+++D GR+DP+  I + +LV SGC+RR+K+G+ L +GGP     + I V+E TP AAE V+  GG++ LA+YN+LG+R ++KP KW   GLPLPR+A+PPPK
Sbjct:   39 SLRHKRCISQSAADTVVRLVDYSVTG-PLRLNNIKDVEGARKKKVRVGRGRGSGCGKTSGRGQKGQRARNSVRLGFEGGQTPLQKRLPKINHHDPFARHLELLSIGRVQQWIDRGRIDPSKRITMFELVHSGCIRRVKEGVLLQEGGP-LAIPIDIEVTEATPGAAESVVKAGGRVTLAWYNRLGLRALIKPCKWHSVGLPLPRWARPPPK 247          
BLAST of Ggra1745.t1 vs. uniprot
Match: M2XDK0 (50S ribosomal protein L15 (Mitochondria) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XDK0_GALSU)

HSP 1 Score: 160 bits (405), Expect = 2.180e-44
Identity = 89/211 (42.18%), Postives = 125/211 (59.24%), Query Frame = 0
Query:   40 ALKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNS--VALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCVRRIKDGLRLIKGGPGTCS-KLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHRYLDEDKDGVPIRILKEHQDI 247
            ++ L +I DNPGARKK+ RVGRG GSGCG   GRG KGQ+ R    V   FEGGQTPL KR P+ +    +  + + V L  +QR VD G+L+P+  +   +L + G +R    G+RL+       S  L   V+ CT +AA  ++  GG + LAYY + GI +++ P +WT + LPLP F QPP + A  Y D  + GVP+R +K   D+
Sbjct:   37 SINLGSIRDNPGARKKKKRVGRGNGSGCGNYCGRGIKGQKKRQGGHVKPWFEGGQTPLFKRLPQHKFPKTWYDNHELVFLSEVQRLVDIGKLNPSQPVNFKELFRHGIIRMPYRGVRLVAREVELFSTSLDFEVTSCTREAAHLILESGGTLSLAYYTRPGIEVLLNPERWTRRDLPLPPFEQPPQRLAAFYNDWSEKGVPVRKIKTLDDL 247          
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A484N1Y3 (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484N1Y3_9ASTE)

HSP 1 Score: 156 bits (395), Expect = 6.920e-43
Identity = 90/217 (41.47%), Postives = 135/217 (62.21%), Query Frame = 0
Query:   24 ASRPVVK---DLTK--------HMQGMALKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNSVALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCV-RRIKDGLRLI-KGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHR 227
            AS+P ++   D+TK        H     L L+++ DNPGARK++ R GRG GSG GKT+GRG KGQ+AR ++  GFEGGQTPL++R PK    +PF+   Q V LG+I + ++ G++D +  I +  L  +G + ++I+DG+RL+ +G       +H+ VS  T  A   V + GG +   YYNKLG+R ++KP  +  +G  LP+ A+PPPK  H+
Sbjct:   37 ASQPFLQCWPDITKPACEIGGIHAYSSLLALNDLRDNPGARKQKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGRGAEHIQWPIHLEVSRVTVRAKAAVEAAGGSVRRVYYNKLGLRALLKPEWFEKKGRLLPKAARPPPKLKHK 253          
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A397AJH9 (Ribosomal_L18e/L15P domain-containing protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A397AJH9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.550e-42
Identity = 89/201 (44.28%), Postives = 128/201 (63.68%), Query Frame = 0
Query:   41 LKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNS---VALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCVR--RIKDGLRLI-KGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHRYLDEDKDG 235
            ++L+N+ DNPGA +K  R+GRG GSG GKT GRG KGQ+AR+     ALGFEGGQTP+ +R PK    + +A  ++T+ + R+Q F+D GR+D    I +  LV SG +   R+K G++L+ KG     + ++I VS+ +  A E V   GG I   Y+N+LG+R ++KP K+   G PLP+ A+PPPK    Y D +K G
Sbjct:   62 VRLNNLADNPGAARKGKRLGRGIGSGKGKTCGRGHKGQKARSGRSGPALGFEGGQTPIYQRVPKRGFNNKWATPMETLNVDRLQLFIDMGRVDATQTITMKTLVDSGLLTTSRVKHGVKLLAKGKSALTTPINIEVSQASQGAIEAVELAGGAIKSVYFNRLGLRSLLKPHKFD--GKPLPQLARPPPKKMGYYTDINKRG 260          
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A2G9H222 (Mitochondrial/chloroplast ribosomal protein L15/L10 n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H222_9LAMI)

HSP 1 Score: 154 bits (389), Expect = 5.270e-42
Identity = 84/189 (44.44%), Postives = 123/189 (65.08%), Query Frame = 0
Query:   41 LKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNSVALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCV-RRIKDGLRLI-KGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHR 227
            L L+++ DNPGARK++ R GRG GSG GKT+GRG KGQ+AR ++  GFEGGQTPL++R PK    +PF+   Q V LG+I + ++ G++D +  I +  L  SG + ++I+DG+RL+ +G       +H+ VS  T  A   V + GG +   YYNKLG+R ++KP  +  +G  LP+ A+PPPK   R
Sbjct:   65 LALNDLRDNPGARKQKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDSGAIGKQIRDGVRLMGRGAEHIKWPIHLEVSRVTVRAKAAVEAAGGSVRRVYYNKLGLRALLKPEWFEKKGRLLPKAARPPPKQRDR 253          
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A7R9TV57 (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TV57_9VIRI)

HSP 1 Score: 154 bits (388), Expect = 1.790e-41
Identity = 96/238 (40.34%), Postives = 142/238 (59.66%), Query Frame = 0
Query:    6 SSMTSGSSLIYVRGLRTAASRPVVKDLTKHMQGMALKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNSVA--LGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCVRRI-KDGLRLIKGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHRYLDEDKDGVPIRI 240
            SS+ S +S +     R+ AS  ++ D+ +  Q   L+L+ + DNPGA+++  RVGRG GSG GKT+GRG KGQ+AR+     LGF GG TPL KR PK    +P A+ ++ V LGRI R+   GRLDP A I +  L  +  V+++ K G+++I         L + V+E +  A   V++ GG+    YYN+LG+R +++P K+  +G  LPR A+PPP+   R+     D VP RI
Sbjct:   24 SSLVSAASALGSGAARSYAS--LLGDVER--QASRLRLNALADNPGAKREAKRVGRGAGSGKGKTAGRGHKGQKARSGGGPKLGFIGGTTPLWKRTPKRGFKNPNARPLEEVQLGRIDRYARWGRLDPTAPITMKSLYDARLVKKVPKFGVKVIGNDKVLTEGLRLEVTEVSQGAKASVVAAGGKATTVYYNRLGLRALLRPDKYEKKGRALPRPAKPPPRLRERF-----DVVPDRI 252          
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A7S3CG90 (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CG90_9CHLO)

HSP 1 Score: 153 bits (386), Expect = 2.060e-41
Identity = 96/227 (42.29%), Postives = 136/227 (59.91%), Query Frame = 0
Query:    6 SSMTSGSSLIYVRGLRTAASRPVVKDLTKHMQGMALKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNS--VALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCV-RRIKDGLRLIKGGPGTCS-KLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHRY 228
            S ++S SS + +     AA +P     ++ M     KL+NI DN GARKK  RVGRG GSG GKT GRG KGQ+AR+     LGFEGGQTP++ R PK   ++P  ++ Q + L ++  ++  GR+DP   I +  L  SG V +++KDG++L+  G    S K+ I VS C+  A E +  +GGQ+   YYNKLG++ ++KP   T   LP P  A+PPPK  H +
Sbjct:   70 SGLSSSSSWLPLSTAAAAALKPSFPGTSEPM-----KLNNISDNKGARKKRKRVGRGIGSGWGKTCGRGHKGQKARSGGRPRLGFEGGQTPIRLRLPKRGFHNPHRREYQWLNLYKLSSWIRQGRIDPEKLITMKTLRDSGVVGKKVKDGVKLLGAGHKEFSHKISIEVSSCSALARESIERQGGQVQTVYYNKLGLKALLKP--GTFDRLPFP--ARPPPKLRHLF 287          
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A6I9U0V7 (uncharacterized protein LOC105173556 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9U0V7_SESIN)

HSP 1 Score: 152 bits (385), Expect = 2.080e-41
Identity = 84/189 (44.44%), Postives = 122/189 (64.55%), Query Frame = 0
Query:   41 LKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNSVALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCV-RRIKDGLRLI-KGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHR 227
            L L+++ DNPGARK++ R GRG GSG GKT+GRG KGQ+AR ++  GFEGGQTPL++R PK    +PF+   Q V LG+I + ++ G++D +  I +  L  SG + ++I DG+RL+ +G       +H+ VS  T  A   V + GG +   YYNKLG+R ++KP  +  +G  LPR A+PPPK   +
Sbjct:   65 LALNDLRDNPGARKQKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDSGAIGKQIGDGVRLMGRGAEHIKWPIHLEVSRVTVRAKAAVEAAGGSVRRVYYNKLGLRALLKPEWFEKKGRLLPRAARPPPKQKDK 253          
BLAST of Ggra1745.t1 vs. uniprot
Match: A0A6G0WRL6 (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRL6_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.420e-41
Identity = 97/229 (42.36%), Postives = 134/229 (58.52%), Query Frame = 0
Query:   19 GLRTAASR-PVVKDLTKHMQGMA-----LKLSNICDNPGARKKEVRVGRGRGSGCGKTSGRGQKGQRARNS---VALGFEGGQTPLQKRFPKVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCVR--RIKDGLRLIKGGPGTCSK-LHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRIVVKPFKWTDQGLPLPRFAQPPPKSAHRYLDEDKDG 235
            GLR A SR  VV     H    A     ++L+N+ DNPGA +K  R+GRG GSG GKTSGRG KGQ+AR+     ALGFEGGQTP+ +R PK    + +A  ++ + + R+Q F+D GR+DP+  I +  L   G +   RIK G++L+  G    S  + I VS+ +  A E V   GG I   Y+N+LG+R ++KP K+      LP+ A+PPPK    Y D +K G
Sbjct:    3 GLRQAFSRLSVVPSRFTHSAAPASLIEPVRLNNLADNPGAARKGKRLGRGIGSGKGKTSGRGHKGQKARSGRSGPALGFEGGQTPIYQRVPKRGFNNKWATPMEVLNVDRLQLFIDMGRIDPSQTITMKTLTDCGLLTASRIKHGVKLLANGKAHLSTPISIEVSQASQGAIEAVEGAGGSIKSVYHNRLGLRALLKPHKFDV----LPQQARPPPKKMGYYTDFEKRG 227          
The following BLAST results are available for this feature:
BLAST of Ggra1745.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMQ06.690e-13976.4750S ribosomal protein L15 n=1 Tax=Gracilariopsis c... [more]
50S ribosomal protein L15-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5F925.770e-7556.4050S ribosomal protein L15-like n=1 Tax=Mercenaria ... [more]
M2XDK02.180e-4442.1850S ribosomal protein L15 (Mitochondria) n=1 Tax=G... [more]
A0A484N1Y36.920e-4341.47Ribosomal_L18e/L15P domain-containing protein n=3 ... [more]
A0A397AJH93.550e-4244.28Ribosomal_L18e/L15P domain-containing protein n=7 ... [more]
A0A2G9H2225.270e-4244.44Mitochondrial/chloroplast ribosomal protein L15/L1... [more]
A0A7R9TV571.790e-4140.34Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S3CG902.060e-4142.29Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A6I9U0V72.080e-4144.44uncharacterized protein LOC105173556 n=1 Tax=Sesam... [more]
A0A6G0WRL64.420e-4142.36Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 68..188
e-value: 1.2E-23
score: 84.0
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMTIGR01071TIGR01071coord: 42..188
e-value: 1.3E-33
score: 113.9
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 36..231
NoneNo IPR availableGENE3D3.100.10.10coord: 108..191
e-value: 5.8E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR12934:SF1139S RIBOSOMAL PROTEIN L15, MITOCHONDRIALcoord: 36..231
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 43..191
score: 15.169538
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 45..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:529723..530526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1745.t1Ggra1745.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 529723..530526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1745.t1 ID=Ggra1745.t1|Name=Ggra1745.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=268bp
MQLLRSSMTSGSSLIYVRGLRTAASRPVVKDLTKHMQGMALKLSNICDNP
GARKKEVRVGRGRGSGCGKTSGRGQKGQRARNSVALGFEGGQTPLQKRFP
KVRTYDPFAKDIQTVTLGRIQRFVDTGRLDPNAEIGLNQLVQSGCVRRIK
DGLRLIKGGPGTCSKLHIRVSECTPDAAEQVISKGGQICLAYYNKLGIRI
VVKPFKWTDQGLPLPRFAQPPPKSAHRYLDEDKDGVPIRILKEHQDIEQM
IKDWPRLIHRREAKAKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR005749Ribosomal_L15_bac-type
IPR030878Ribosomal_L15
IPR036227L18e/L15P_sf