Ggra1730.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1730.t1
Unique NameGgra1730.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length176
Homology
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A2V3ISN2 (Aminoacyl-tRNA hydrolase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN2_9FLOR)

HSP 1 Score: 232 bits (592), Expect = 1.690e-75
Identity = 120/175 (68.57%), Postives = 139/175 (79.43%), Query Frame = 0
Query:    1 MLPDLTPRDGTTGAIGLTAGFVLGFLTKHILHRRLKKLPDYDSDEEDDFVPNSYARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            M+ +L+ +DGT G +GL AGF+LGFLT HIL RRLK    Y   +     P SY  + EEH+L+LCVR DLKM+KGKIAAQVGHATLGA+KAAARR P AL  WE NAQPKIAVQIRS++EA  L+ HA+ LGL TYMV DAG+TQIAAGSMTVLAVGPGP SLV+QVTGKL+LL
Sbjct:    1 MVSELSAKDGTAGVVGLAAGFLLGFLTNHIL-RRLKTQDVYYESDXXXXPPTSYRASGEEHRLILCVRTDLKMQKGKIAAQVGHATLGAFKAAARRAPAALKTWEVNAQPKIAVQIRSYKEAQQLQRHANSLGLVTYMVYDAGKTQIAAGSMTVLAVGPGPVSLVNQVTGKLRLL 174          
BLAST of Ggra1730.t1 vs. uniprot
Match: R7QT15 (Aminoacyl-tRNA hydrolase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT15_CHOCR)

HSP 1 Score: 197 bits (502), Expect = 8.790e-62
Identity = 106/169 (62.72%), Postives = 119/169 (70.41%), Query Frame = 0
Query:    8 RDGTTGAIGLTAGFVLGFLTKHILHR-RLKKLPDYDSDEEDDFVPNSYARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            RD   G IG+T GFVLG  T+ +  R R +    Y SD E+D          E HKLVLCVR DLKM KGKIAAQVGHAT+GAYK A  R PTAL IWE NAQPKIA+Q+ S  +A+ L   A R GL TYMV DAGRTQIAAGS+TVLAVGPGP SLV+QVTG L+LL
Sbjct:    8 RDTLAGGIGVTTGFVLGLFTRTVFRRFRPQLTSQYSSDSEEDIGWEPAGSVGEAHKLVLCVRTDLKMSKGKIAAQVGHATIGAYKRAETRNPTALRIWEHNAQPKIALQVSSRHQAEALDREARRRGLVTYMVHDAGRTQIAAGSLTVLAVGPGPDSLVNQVTGSLRLL 176          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A6T6PRY8 (Aminoacyl-tRNA hydrolase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6PRY8_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 4.560e-44
Identity = 84/167 (50.30%), Postives = 112/167 (67.07%), Query Frame = 0
Query:    9 DGTTGAIGLTAGFVLGFLTKHILHRRLKKLPDYDSDEEDDFVPNSYARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            D   G   + AG + G+L   I HR  KKL    +         +++ +   +KL+ CVR DLKM KGKIAAQ GHATLGAY++A    P A+A+WE NAQPKIA+QI+S  EA++++  A   G+ +Y V DAGRTQIAAGS+TV+AVGPGP+ ++DQ+T  LKLL
Sbjct:    4 DVAFGWFHVIAGVIGGYLLCEIRHRGGKKLRMIRA--------GTHSLSGGNYKLIFCVRTDLKMTKGKIAAQCGHATLGAYQSALIHNPNAVAMWESNAQPKIALQIKSLSEAESIQRIARSKGVSSYAVYDAGRTQIAAGSLTVVAVGPGPSEVIDQITRHLKLL 162          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A7S1XF27 (Aminoacyl-tRNA hydrolase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF27_9RHOD)

HSP 1 Score: 150 bits (378), Expect = 3.810e-43
Identity = 79/116 (68.10%), Postives = 87/116 (75.00%), Query Frame = 0
Query:   60 EHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            E KLV CVR DLKM KGKIAAQ GHATLGA+K A R+ P AL +WE  AQ KIA+QI+S  EA TL   A  L LPTYMV DAGRTQIAAGS+TVLA+GP     +DQVTG LKLL
Sbjct:   48 EFKLVFCVRTDLKMTKGKIAAQCGHATLGAFKVAQRKDPNALGLWEAEAQAKIALQIKSAAEAVTLERKARALQLPTYMVYDAGRTQIAAGSLTVLAIGPADVETIDQVTGHLKLL 163          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A5J4Z8V8 (Aminoacyl-tRNA hydrolase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8V8_PORPP)

HSP 1 Score: 149 bits (377), Expect = 1.050e-42
Identity = 78/126 (61.90%), Postives = 92/126 (73.02%), Query Frame = 0
Query:   50 VPNSYARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            V +   R +   K+V CVR DLKM +GKIAAQVGHATLGAY+ A R  P     WER AQPKIA+QI S  EA  ++  A R GL  Y VLDAG+TQIAAGS+TV+A+GPGPA L+DQ+TGKLKLL
Sbjct:   60 VTDEDGRMDTYCKMVFCVRTDLKMGRGKIAAQVGHATLGAYQIALRHAPQYCTAWERGAQPKIALQINSESEAIEMQRKAHRAGLVAYDVLDAGKTQIAAGSLTVVAIGPGPAHLIDQITGKLKLL 185          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A7S2ZHR8 (Aminoacyl-tRNA hydrolase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZHR8_9RHOD)

HSP 1 Score: 149 bits (375), Expect = 1.050e-42
Identity = 85/165 (51.52%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   11 TTGAIGLTAGFVLGFLTKHILHRRLKKLPDYDSDEEDDFVPNSYARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            T   +G+  G ++GFL              +D       V +  +  + E+K+VLCVR DL MKKGKIAAQ GHATLG YK A R  P  +  WE NAQPKIAVQI+S  EA  L   A   G+PTYMV DAGRTQI+AGSMTVLA+GP     +D +TGKLKLL
Sbjct:    4 TEEVLGIVGGLLVGFLIGRSRGXXXXXXXXFDG------VFSEGSGLHGEYKIVLCVRTDLGMKKGKIAAQCGHATLGVYKEAVRFRPREVNAWEENAQPKIAVQIKSMNEARGLERAARSRGIPTYMVYDAGRTQISAGSMTVLAIGPARKDELDAITGKLKLL 162          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A7S1TJX5 (Aminoacyl-tRNA hydrolase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TJX5_9RHOD)

HSP 1 Score: 141 bits (356), Expect = 2.490e-40
Identity = 75/116 (64.66%), Postives = 84/116 (72.41%), Query Frame = 0
Query:   60 EHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            E K+VLCVR DLKMKKGKI AQ GHA +GAY+AA    P  L  W  NAQPKIA+QI S REA  L   A + GL TY V DAGRTQ+ AGS+TVLA+GPGPA  +D VTG LKLL
Sbjct:    9 EAKMVLCVRTDLKMKKGKIGAQCGHAAIGAYEAAQDAAPVWLNTWIYNAQPKIALQIASEREARELAKRAKQRGLCTYTVYDAGRTQVKAGSLTVLAIGPGPADEIDSVTGHLKLL 124          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A177CF50 (Aminoacyl-tRNA hydrolase n=1 Tax=Paraphaeosphaeria sporulosa TaxID=1460663 RepID=A0A177CF50_9PLEO)

HSP 1 Score: 142 bits (359), Expect = 6.750e-40
Identity = 84/186 (45.16%), Postives = 108/186 (58.06%), Query Frame = 0
Query:    3 PDLTPRDGTTGAIGLTAGFVLGFLTKHIL----------HRRLKKLP-DYDSDEEDDFVPNSYARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAI--WERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            P +         IGL  G++LG      L           R+ K L  D  SDE+DD  P+ +   NEE KLVL VR DL M KGKI AQ GHATL  YK   RR+P +  +  WER+ Q K+A+Q++S  E + L+  A  LG+   ++ DAGRTQIA+GS TVL +GP P  ++DQVTG LKLL
Sbjct:    7 PSMANVATACAIIGLVTGYLLGQAKSLGLFGGSPISAPAERKQKALELDESSDEDDDNAPSEFPGHNEECKLVLIVRTDLGMTKGKIGAQCGHATLACYKQFLRRSPNSAVLKRWERSGQMKVALQVKSEEELEVLQAQALSLGVVAQIIYDAGRTQIASGSATVLGIGPAPKGVIDQVTGNLKLL 192          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A1Y2A8H0 (Aminoacyl-tRNA hydrolase n=1 Tax=Clohesyomyces aquaticus TaxID=1231657 RepID=A0A1Y2A8H0_9PLEO)

HSP 1 Score: 139 bits (349), Expect = 2.590e-38
Identity = 78/140 (55.71%), Postives = 98/140 (70.00%), Query Frame = 0
Query:   40 DY-DSDEEDDFVPNS-YARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTA--LAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            DY DS +ED+  P S +A  NEE KLVL VR DL M KGKI AQ GHATL  YK+  R +P +  L  WER+ Q K+A+Q++S  E +TL+  A  LGL  +++ DAGRTQIA+GS TVL +GPGP  ++DQVTG LKLL
Sbjct:   59 DYEDSSDEDETEPLSDFAGHNEECKLVLVVRTDLGMTKGKIGAQCGHATLACYKSFLRNSPNSPILKRWERSGQMKVALQVKSEEELETLQAQALSLGLCAHIIHDAGRTQIASGSATVLGIGPGPKGIIDQVTGSLKLL 198          
BLAST of Ggra1730.t1 vs. uniprot
Match: A0A024UF26 (Aminoacyl-tRNA hydrolase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UF26_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.630e-37
Identity = 70/117 (59.83%), Postives = 86/117 (73.50%), Query Frame = 0
Query:   59 EEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTALAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAGSMTVLAVGPGPASLVDQVTGKLKLL 175
            E HK+VL VR DLKM KGKIAAQ GHATLGAYK A +RTP AL +WE + Q K+A+++ +  E   L + A  +GL  Y+V+DAGRTQIA  + TVLAVGP PAS VD +TG LKL+
Sbjct:   66 EPHKMVLVVRNDLKMGKGKIAAQCGHATLGAYKRAVKRTPQALDLWEASGQTKVALRVETEEEMMVLADRAKEIGLVHYVVVDAGRTQIAPDTKTVLAVGPAPASAVDNLTGHLKLM 182          
The following BLAST results are available for this feature:
BLAST of Ggra1730.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISN21.690e-7568.57Aminoacyl-tRNA hydrolase n=1 Tax=Gracilariopsis ch... [more]
R7QT158.790e-6262.72Aminoacyl-tRNA hydrolase n=1 Tax=Chondrus crispus ... [more]
A0A6T6PRY84.560e-4450.30Aminoacyl-tRNA hydrolase n=1 Tax=Timspurckia oligo... [more]
A0A7S1XF273.810e-4368.10Aminoacyl-tRNA hydrolase n=1 Tax=Compsopogon caeru... [more]
A0A5J4Z8V81.050e-4261.90Aminoacyl-tRNA hydrolase n=1 Tax=Porphyridium purp... [more]
A0A7S2ZHR81.050e-4251.52Aminoacyl-tRNA hydrolase n=1 Tax=Rhodosorus marinu... [more]
A0A7S1TJX52.490e-4064.66Aminoacyl-tRNA hydrolase n=1 Tax=Erythrolobus aust... [more]
A0A177CF506.750e-4045.16Aminoacyl-tRNA hydrolase n=1 Tax=Paraphaeosphaeria... [more]
A0A1Y2A8H02.590e-3855.71Aminoacyl-tRNA hydrolase n=1 Tax=Clohesyomyces aqu... [more]
A0A024UF262.630e-3759.83Aminoacyl-tRNA hydrolase n=1 Tax=Aphanomyces invad... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 62..175
e-value: 3.7E-39
score: 133.7
IPR002833Peptidyl-tRNA hydrolase, PTH2TIGRFAMTIGR00283TIGR00283coord: 62..175
e-value: 4.0E-36
score: 121.8
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 16..175
IPR002833Peptidyl-tRNA hydrolase, PTH2CDDcd02430PTH2coord: 61..175
e-value: 1.63359E-56
score: 171.552
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10Bit1coord: 56..175
e-value: 1.5E-43
score: 149.5
IPR023476Peptidyl-tRNA hydrolase II domain superfamilySUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 60..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..175
NoneNo IPR availableTMHMMTMhelixcoord: 10..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:489121..489735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1730.t1Ggra1730.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 489121..489735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1730.t1 ID=Ggra1730.t1|Name=Ggra1730.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=176bp
MLPDLTPRDGTTGAIGLTAGFVLGFLTKHILHRRLKKLPDYDSDEEDDFV
PNSYARANEEHKLVLCVRVDLKMKKGKIAAQVGHATLGAYKAAARRTPTA
LAIWERNAQPKIAVQIRSHREADTLRNHASRLGLPTYMVLDAGRTQIAAG
SMTVLAVGPGPASLVDQVTGKLKLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002833PTH2
IPR023476Pep_tRNA_hydro_II_dom_sf