Ggra1722.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1722.t1
Unique NameGgra1722.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length293
Homology
BLAST of Ggra1722.t1 vs. uniprot
Match: A0A2V3ISL2 (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 439 bits (1129), Expect = 1.480e-153
Identity = 200/286 (69.93%), Postives = 234/286 (81.82%), Query Frame = 0
Query:    8 IVSLFSLLSTTCLALGSGDYYRRFFGDGTYYGFTTQGNCAIRSPLPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAEWVFFLMEGSNRYYMKMQPRGLQTPVQAMRIGSQWGTKTQDNFYIFQDGGGFRFPVQISMRTTMGKWVNVQMTYMKPDGPVYPAGYRTGR--SAPP--ASISAPQPPKPXXXXXXGKCVPNWKPCTGPKNFWGTSNCCSKNYRCVVAGQRNFVGKRCEP 289
            I++L  LL+    A+   DYYR F G+GTYYG+TT+GNCAIRSP+P+MY+GM+P+AINNAQY  SASCGACL+VTGYGQGSGANPI GTFKAYVHDRCPECKYGDIDLSK GDGRW+V WKFIPCP E+VFFL EGSNRYY+K+QPRGL+TPV A+ +G QWGTKTQDNFYI Q+GGGFRFP+ + MRT + +W+ VQ+ Y +PDG V+P GY TGR  S PP  A  +AP+P          KCVP+WKPCTGPKN+WGTSNCCS NYRCV AGQ NFVG+RCEP
Sbjct:    6 ILALALLLAVVANAMSPNDYYRVFHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPITVQMRTVLNEWITVQLAYSRPDGAVFPVGYTTGRARSQPPPRAQAAAPKP-------ATQKCVPDWKPCTGPKNWWGTSNCCSGNYRCVKAGQANFVGRRCEP 284          
BLAST of Ggra1722.t1 vs. uniprot
Match: F2Z7J0 (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 433 bits (1113), Expect = 3.760e-151
Identity = 197/280 (70.36%), Postives = 228/280 (81.43%), Query Frame = 0
Query:   14 LLSTTCLALGSGDYYRRFFGDGTYYGFTTQGNCAIRSPLPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAEWVFFLMEGSNRYYMKMQPRGLQTPVQAMRIGSQWGTKTQDNFYIFQDGGGFRFPVQISMRTTMGKWVNVQMTYMKPDGPVYPAGYRTG---RSAPPASISAP-QPPKPXXXXXXGKCVPNWKPCTGPKNFWGTSNCCSKNYRCVVAGQRNFVGKRCEP 289
            LL     AL  GDY R FFGDGTYYG+TT+GNCAIRSPLP MYSGM+P+AINNAQY  S SCGACL VTGYGQGSGANP+VGTFKAYVHDRCPECKYGDIDLSKSGDGRWKV W+FIPCP EWVFFL EGSNR+Y+K+QPRGL+TPV    +  Q GTKTQDNFYI Q+GGGFR+P+ + MRT + +W+ V++ Y  PDGP +P GY++G   RS PP++++AP + P+P       KCVPNWKPCTGPKN+W TSNCCS NYRCV AGQ +FVGKRCEP
Sbjct:    7 LLPIAVTALSPGDYRRTFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPLTVQMRTVLNEWITVKLAYSVPDGPAFPIGYQSGGGGRSRPPSAVAAPAKAPRPAS----NKCVPNWKPCTGPKNWWRTSNCCSSNYRCVNAGQADFVGKRCEP 282          
BLAST of Ggra1722.t1 vs. uniprot
Match: D8LHU1 (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.170e-56
Identity = 89/177 (50.28%), Postives = 119/177 (67.23%), Query Frame = 0
Query:   27 YYRRFFGDGTYYGFTTQG--NCAIRSPLPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPA-EWVFFLMEGSNRYYMKMQPRGLQTPVQAMRIGSQWGTKTQDNFYIFQDGGGFRFPVQISMRTTMGK 200
            Y  +F GD TYYG T  G  NCAIRSPLP MY GM+P+A+N+ QYA S  CGAC+E  G+G+G G +P+ G FKAYV DRCPEC +GD+D +  GDGRW +SW F+PC       FL EGSN +Y K+QPRG ++PV+ + I      +++DNF+I + GG F    ++  +T + K
Sbjct:   37 YDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILE-GGPFDGEQEVHTKTVLNK 212          
BLAST of Ggra1722.t1 vs. uniprot
Match: A0A1X6NJE1 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 187 bits (475), Expect = 2.200e-55
Identity = 87/154 (56.49%), Postives = 110/154 (71.43%), Query Frame = 0
Query:   33 GDGTYYGFTTQGNCAIRSPLPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAEWVF--FLMEGSNRYYMKMQPRGLQTPVQAMRIGSQWGTKTQDNFYIFQDGG 184
            G+GTY+G TT+GNCA+  PLPA Y G++ +A++ A YAGSA+CGACL VTG G G+GANPI GTF AYV DRCPEC  GD+DL+  GDGRW VSW  +PCP       FL+EGSN +Y+K+Q RGL  P  ++ +G     +TQDNF+I    G
Sbjct:   50 GEGTYFGPTTRGNCAL-DPLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIVATAG 202          
BLAST of Ggra1722.t1 vs. uniprot
Match: D8LRN1 (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 2.550e-51
Identity = 81/174 (46.55%), Postives = 107/174 (61.49%), Query Frame = 0
Query:   25 GDYYRRFFGDGTYYGFTTQGNCAIRSPLPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAEWVFFLMEGSNRYYMKMQPRGLQTPVQAMRIGSQWGTKTQDNFYIFQDGGGFRFPVQISMRTTM 198
            G Y   + G+GTYYG TT G C+    +P MY GM+P+A+N  QY  S  CGAC+E T  G GSG NPI  TFKA++ D+CPEC+ GD+D S SGDGRW + WKF+ CP E   F+   +N YY K+QPRG  TPV ++ +  Q   +T DN +   + G      Q  + TT+
Sbjct:  102 GQYGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTV 275          
BLAST of Ggra1722.t1 vs. uniprot
Match: A0A2P6NVN6 (Uncharacterized protein n=2 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NVN6_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 3.080e-41
Identity = 86/211 (40.76%), Postives = 128/211 (60.66%), Query Frame = 0
Query:    8 IVSLFSLLSTTCLALGSGDYYRRFFGDGTYYG-FTTQGNCAIRSPLPAMYSGM---MPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPA--EWVFFLMEGSNRYYMKMQPRGLQTPVQAMRI-----GSQWG-TKTQDNFYIFQDGGGFR---FPVQISMRTTMGKWVN 203
            ++SLF+L++   L     D Y    GDGTYYG     GNC I  P+P+  S     + +A+N  QY GSA+CG CL+VTG G GSG+NPI GTF  +V+D+CPECK GD+DL+K+GDGRWK+SWK + CP     + +  +  ++YY+K+QPR  +  +  + I     G+ +  T+T DN++   D    +   FP++I +    G+ +N
Sbjct:    7 LLSLFALVACNVL-----DLYTTQSGDGTYYGPDNNSGNCGIY-PVPSQISSATQGLNVAMNAPQYFGSAACGLCLQVTGNGTGSGSNPITGTFLVFVNDQCPECKPGDLDLAKNGDGRWKISWKVVDCPVGDSKIQYSYQSISQYYIKLQPRNNRIALNYISIQDPTSGTYFAMTRTSDNYFTLPDSYNAKPLTFPIKIQLVAFNGQVLN 211          
BLAST of Ggra1722.t1 vs. uniprot
Match: A0A7S4IRK7 (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRK7_9EUKA)

HSP 1 Score: 138 bits (348), Expect = 1.060e-34
Identity = 69/186 (37.10%), Postives = 109/186 (58.60%), Query Frame = 0
Query:   33 GDGTYYGFTTQGNCAIRSPLPAMYSG---MMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAEW--VFFLMEGSNRYYMKMQPRGLQTPVQAMRIGSQWG------TKTQDNFYIFQDGGGFRFPVQISMRTTMGKWVNVQMT 207
            G+GTYYG ++ G+C +   LP +         +A+N+ QY GS +CG C+++TG G GSGA+PI GTF  YV D CPEC  GD+D+++SGDGRW++ W  + CP  +  + +L +GSN +++K+Q R  + PV  + +    G      T T DNF+ +Q          + + +  G+ V+  +T
Sbjct:   21 GEGTYYGPSSSGSCTLDFNLPPVAQTSEIFSTVAMNSPQYYGSLTCGMCIQMTGEGVGSGADPIDGTFIVYVSDLCPECASGDLDVAQSGDGRWEIEWTAVDCPGNYGDLQYLGQGSNDFFLKVQVRNHRVPVSQLYLLDADGQSRITMTPTSDNFFTYQSSSSLSGSYTVQVESVDGQAVDDVVT 206          
BLAST of Ggra1722.t1 vs. uniprot
Match: A0A8B8E688 (LOW QUALITY PROTEIN: uncharacterized protein LOC111128007 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E688_CRAVI)

HSP 1 Score: 125 bits (314), Expect = 4.650e-31
Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = 0
Query:   27 YYRRFFGDGTYYGFTTQGNCAIRSP-LPAMYSGMMP-IAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAE--WVFFLMEGSNRYYMKMQPRGLQTPVQAMRI----GSQWGTK--TQDNFYIFQDGGGFR---FPVQISMRTTMGKWVNVQMTYMKPDGPVYPAGYRTGR 224
            Y +++ GDGTYYG   +G C+   P +P +   +   +A+N  Q+ GS SCG C  V G GQGSG +PI GTF A+V D CP C+ GD+DL+++GDGRW++  + I CP     + +  +GSN +Y+K+Q R  + P   + +      +W     + D F++F      +    P ++ +    GK V  ++  +  D  +Y  G +  R
Sbjct:   25 YRQKYTGDGTYYGTGQEGTCSYSPPSMPPVSRNINKLVALNAPQFFGSLSCGXCFRVRGTGQGSGNDPITGTFTAFVKDLCPGCRAGDLDLAENGDGRWRIEIQAIQCPVGNGKIEYKFQGSNPWYLKLQIRNARIPATTVEMYQPKSRRWAAMRPSTDGFWVFGSDPVDKPVVTPFRVRLTAANGKVVTDRIPRIANDVVIYGGGVQFPR 235          
BLAST of Ggra1722.t1 vs. uniprot
Match: A0A7L9QDS2 (Putative extracellular protein CSOL_007a n=1 Tax=Pseudococcomyxa simplex TaxID=464287 RepID=A0A7L9QDS2_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 1.170e-19
Identity = 66/201 (32.84%), Postives = 98/201 (48.76%), Query Frame = 0
Query:   33 GDGTYYGFT-TQGNCAIRSP----LPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPI-VGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAEWVFFL--MEGSNRYYMKMQPRGLQTPVQAMRIGSQW---GT-----KTQDNFYIFQ--DGGGFRFPVQISMRTTMGKWVNVQMTYMKPDGPV 215
            GDGTYYG     G C+  +     LP        +A+++  +  S +CG C+ + G G GSG +PI + T    V + CPECK GD+D  K+GDGRW++ W  + C      F+   +GSN YY+KMQ    + PV    +  QW   GT     +  DN+++ Q  +      P Q+ + +  G  V   +    P G V
Sbjct:   33 GDGTYYGDNGAYGTCSFSNSDAQYLPWAAGTSFRVAMDSPLFFNSQTCGMCIAMRGTGPGSGGDPIPLTTQYVLVSNLCPECKSGDLDQEKAGDGRWEIEWYPVQCAVGNTPFVYSFQGSNPYYIKMQISNHRVPV----LSVQWFFSGTWYDMNRVGDNYFVIQAINDQALILPAQVKITSIFGDTVIDTVATSSPTGRV 229          
BLAST of Ggra1722.t1 vs. uniprot
Match: A0A7Y5KT89 (Expansin-like EG45 domain-containing protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5KT89_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 2.260e-19
Identity = 62/184 (33.70%), Postives = 94/184 (51.09%), Query Frame = 0
Query:   33 GDGTYYGFTT-QGNCAIRSPLPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAYVHDRCPECKYGDIDLSKSG--------DGRWKVSWKFIPCPAEW--VFFLMEGSNRYYMKMQPRGLQTPVQAMRIGSQWGT-----KTQDNFYIFQDGGGFRFPVQISMRTTMGK 200
            G+ TYY F    GNC+     PA    ++  A+N+A YAGSA+CG C EV      SG N   G+    V D+CPEC  GDIDLS            GR  + W+++ C  +   V+   EGSN +++ +Q R  +TP+Q++    + G      +   NF++ +DG G   P  + +  T+G+
Sbjct:   52 GEATYYDFADGSGNCSF----PATPDDLLVGAMNHADYAGSAACGTCAEV------SGPN---GSVTVRVVDQCPECPQGDIDLSPEAFEQIAALEAGRVPIQWRYVACDVDGPIVYHFKEGSNPWWVAIQIRNHRTPIQSVEAKDESGNYVSLVRADYNFFLKEDGLG-EGPFSLRVTDTLGE 221          
The following BLAST results are available for this feature:
BLAST of Ggra1722.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISL21.480e-15369.93Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
F2Z7J03.760e-15170.36Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
D8LHU11.170e-5650.28Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A1X6NJE12.200e-5556.49Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
D8LRN12.550e-5146.55Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A2P6NVN63.080e-4140.76Uncharacterized protein n=2 Tax=Planoprotostelium ... [more]
A0A7S4IRK71.060e-3437.10Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A8B8E6884.650e-3133.65LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
A0A7L9QDS21.170e-1932.84Putative extracellular protein CSOL_007a n=1 Tax=P... [more]
A0A7Y5KT892.260e-1933.70Expansin-like EG45 domain-containing protein n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 132..214
e-value: 3.2E-8
score: 35.6
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 27..130
e-value: 3.7E-17
score: 64.4
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 29..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..245
NoneNo IPR availablePANTHERPTHR31836FAMILY NOT NAMEDcoord: 28..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:468805..469683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1722.t1Ggra1722.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 468805..469683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1722.t1 ID=Ggra1722.t1|Name=Ggra1722.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=293bp
MVHSIVFIVSLFSLLSTTCLALGSGDYYRRFFGDGTYYGFTTQGNCAIRS
PLPAMYSGMMPIAINNAQYAGSASCGACLEVTGYGQGSGANPIVGTFKAY
VHDRCPECKYGDIDLSKSGDGRWKVSWKFIPCPAEWVFFLMEGSNRYYMK
MQPRGLQTPVQAMRIGSQWGTKTQDNFYIFQDGGGFRFPVQISMRTTMGK
WVNVQMTYMKPDGPVYPAGYRTGRSAPPASISAPQPPKPSGGGGGGKCVP
NWKPCTGPKNFWGTSNCCSKNYRCVVAGQRNFVGKRCEPNWL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036749Expansin_CBD_sf
IPR036908RlpA-like_sf