Ggra1676.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1676.t1
Unique NameGgra1676.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length586
Homology
BLAST of Ggra1676.t1 vs. uniprot
Match: R7QJH2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJH2_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 3.710e-21
Identity = 72/152 (47.37%), Postives = 95/152 (62.50%), Query Frame = 0
Query:  436 KYHNEEMEMIPYFS-----KEFGTRSASDRPMSIESKIFGDTSPDVGLSYFSREPSAPLDRLSGELKYNGNGKWSCNMSDILNVGVEPGRSGSLGHLSLMLPELGNGLRGTYSNSVSPLGMTLTNPSASPRTSVAYIRRGFISPHVSQSFSI 582
            K  +EE E++PYF+     K   ++S S R M  +SK   D + ++G  Y++R+PSA L   SG LKYNG   WS NMSDIL    E   SGS   LSLM+PEL  G RG+Y NSVSPLG+TL   ++SPR ++A+  RGF SP  S S ++
Sbjct:  590 KLKDEEPELMPYFTTITGAKRLRSQSGSGRNMPGDSKDMSDYTAELGQQYYTRKPSAAL---SGGLKYNG--AWSGNMSDILGTAFEGSGSGSA-LLSLMIPELA-GSRGSYGNSVSPLGITL---ASSPRPALAFSHRGFQSPRNSFSLNL 731          
BLAST of Ggra1676.t1 vs. uniprot
Match: W5P9Z3 (Kruppel like factor 15 n=1 Tax=Ovis aries TaxID=9940 RepID=W5P9Z3_SHEEP)

HSP 1 Score: 68.9 bits (167), Expect = 5.300e-9
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+HRCTF GC KT+++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:  274 PKNP--AAELLKMHRCTFPGCSKTYTKSSHLKAHLRRHTGEKPFACTWPGCG 323          
BLAST of Ggra1676.t1 vs. uniprot
Match: A0A0N4SVC6 (Krueppel-like factor 15 (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=A0A0N4SVC6_MOUSE)

HSP 1 Score: 65.5 bits (158), Expect = 5.900e-9
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+H+CTF GC K +++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:   85 PKNP--AAELLKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCG 134          
BLAST of Ggra1676.t1 vs. uniprot
Match: A0A8C2S9J5 (Kruppel like factor 15 n=3 Tax=Capra hircus TaxID=9925 RepID=A0A8C2S9J5_CAPHI)

HSP 1 Score: 68.9 bits (167), Expect = 9.030e-9
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+HRCTF GC KT+++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:  299 PKNP--AAELLKMHRCTFPGCSKTYTKSSHLKAHLRRHTGEKPFACTWPGCG 348          
BLAST of Ggra1676.t1 vs. uniprot
Match: Q4R9S5 ((spotted green pufferfish) hypothetical protein (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4R9S5_TETNG)

HSP 1 Score: 63.2 bits (152), Expect = 2.100e-8
Identity = 24/45 (53.33%), Postives = 36/45 (80.00%), Query Frame = 0
Query:   14 AAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            A ++K+H+C+F GC K +++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:   82 ADLIKMHKCSFPGCNKMYTKSSHLKAHLRRHTGEKPFACTWPGCG 126          
BLAST of Ggra1676.t1 vs. uniprot
Match: A0A6A1Q1P9 (C2H2-type domain-containing protein n=2 Tax=Mysticeti TaxID=9761 RepID=A0A6A1Q1P9_BALPH)

HSP 1 Score: 66.2 bits (160), Expect = 4.220e-8
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+H+CTF GC K +++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:  277 PKNP--AAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCG 326          
BLAST of Ggra1676.t1 vs. uniprot
Match: Krueppel-like factor 15 n=1 Tax=Bos mutus TaxID=72004 RepID=UPI0003C01269 (Krueppel-like factor 15 n=1 Tax=Bos mutus TaxID=72004 RepID=UPI0003C01269)

HSP 1 Score: 67.4 bits (163), Expect = 4.890e-8
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+HRCTF GC K +++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:  299 PKNP--AAELIKMHRCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCG 348          
BLAST of Ggra1676.t1 vs. uniprot
Match: A0A384CMF9 (Krueppel-like factor 15 n=4 Tax=Caniformia TaxID=379584 RepID=A0A384CMF9_URSMA)

HSP 1 Score: 66.2 bits (160), Expect = 5.200e-8
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+H+CTF GC K +++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:  308 PKNP--AAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCG 357          
BLAST of Ggra1676.t1 vs. uniprot
Match: Krueppel-like factor 15 isoform X2 n=2 Tax=Equus TaxID=35510 RepID=UPI000C9DF8DD (Krueppel-like factor 15 isoform X2 n=2 Tax=Equus TaxID=35510 RepID=UPI000C9DF8DD)

HSP 1 Score: 66.2 bits (160), Expect = 5.350e-8
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+H+CTF GC K +++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:  306 PKNP--AAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCG 355          
BLAST of Ggra1676.t1 vs. uniprot
Match: A0A7J7TR10 (Kruppel like factor 15 n=10 Tax=Rhinolophus TaxID=49442 RepID=A0A7J7TR10_RHIFE)

HSP 1 Score: 66.2 bits (160), Expect = 5.620e-8
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    7 PQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPYAC--PDCG 56
            P+ P  +A ++K+H+CTF GC K +++ S+LKAH+R HTGE+P+AC  P CG
Sbjct:  307 PKNP--AAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCG 356          
The following BLAST results are available for this feature:
BLAST of Ggra1676.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QJH23.710e-2147.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
W5P9Z35.300e-955.77Kruppel like factor 15 n=1 Tax=Ovis aries TaxID=99... [more]
A0A0N4SVC65.900e-951.92Krueppel-like factor 15 (Fragment) n=1 Tax=Mus mus... [more]
A0A8C2S9J59.030e-955.77Kruppel like factor 15 n=3 Tax=Capra hircus TaxID=... [more]
Q4R9S52.100e-853.33(spotted green pufferfish) hypothetical protein (F... [more]
A0A6A1Q1P94.220e-851.92C2H2-type domain-containing protein n=2 Tax=Mystic... [more]
Krueppel-like factor 15 n=1 Tax=Bos mutus TaxID=72004 RepID=UPI0003C012694.890e-853.85Krueppel-like factor 15 n=1 Tax=Bos mutus TaxID=72... [more]
A0A384CMF95.200e-851.92Krueppel-like factor 15 n=4 Tax=Caniformia TaxID=3... [more]
Krueppel-like factor 15 isoform X2 n=2 Tax=Equus TaxID=35510 RepID=UPI000C9DF8DD5.350e-851.92Krueppel-like factor 15 isoform X2 n=2 Tax=Equus T... [more]
A0A7J7TR105.620e-851.92Kruppel like factor 15 n=10 Tax=Rhinolophus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 50..72
e-value: 0.0016
score: 27.7
coord: 20..44
e-value: 6.7E-5
score: 32.3
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 50..72
e-value: 0.013
score: 15.9
coord: 20..44
e-value: 1.2E-5
score: 25.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 22..44
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 52..72
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 20..49
score: 15.74975
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 50..77
score: 12.653067
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 45..74
e-value: 6.1E-12
score: 47.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 12..44
e-value: 7.1E-13
score: 50.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..233
NoneNo IPR availablePANTHERPTHR19818:SF143LD47926P-RELATEDcoord: 18..75
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 18..75
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 19..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:321179..322936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1676.t1Ggra1676.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 321179..322936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1676.t1 ID=Ggra1676.t1|Name=Ggra1676.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=586bp
MSSTSQPQGPPISAAVVKVHRCTFEGCEKTFSRKSNLKAHMRLHTGEEPY
ACPDCGKKFKWKSCMASHERVHSRRTDHPLTASAYARRAELQHASPARRR
NQHSAAPVPNLPTDAFVAQLQFQQANQWQHAQRQPQPPPTDHIFPPALRH
QRTQHHLQEQQRISQQERLQYYEREQRLMQLQQQFHLTDNQRITQPSAPH
HNLHHDFDPNSDARQGYPPPAQQYLQQQQPHLPPEQSPNAPNPPHHPYNS
TFQHEQPTYPPSNAQKHRELSYPPPQGYAADPITYPQPTYSQPLSEHPNS
AIPSHEYADLVLQAKKVSLLDYFNTSATDNEIASGRHLSTEMTPIEESPP
KSGSDAAQFQLAQDRAHEDQGEDPKPDNIRYCQDAPLKQAHTTDPQQLDA
PSSNAANDVLCSSDITPTDPANSNGSLDFNLCRPPKYHNEEMEMIPYFSK
EFGTRSASDRPMSIESKIFGDTSPDVGLSYFSREPSAPLDRLSGELKYNG
NGKWSCNMSDILNVGVEPGRSGSLGHLSLMLPELGNGLRGTYSNSVSPLG
MTLTNPSASPRTSVAYIRRGFISPHVSQSFSIADK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf