Ggra167.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra167.t1
Unique NameGgra167.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length183
Homology
BLAST of Ggra167.t1 vs. uniprot
Match: A0A2V3ISR2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR2_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 8.870e-62
Identity = 99/133 (74.44%), Postives = 121/133 (90.98%), Query Frame = 0
Query:   36 TDSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQRDEQDSFGDAEFQRRERD 168
            TDSYEREFYDMVRTVFLKYALQLRIGRM+G LVAYHNTTELL LEY SLKEIESY+FG++RWADVAFGTA+ LL+ +L TIT ++PLD+ D++LKVMLYTEWSKL+M+VFVQ L++ E D+FG+ EF+RR+++
Sbjct:  373 TDSYEREFYDMVRTVFLKYALQLRIGRMAGALVAYHNTTELLGLEYISLKEIESYIFGSERWADVAFGTAVHLLQEVLGTITKSMPLDDCDEKLKVMLYTEWSKLKMFVFVQRLKKGEVDAFGNKEFERRDQE 505          
BLAST of Ggra167.t1 vs. uniprot
Match: R7QNH1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNH1_CHOCR)

HSP 1 Score: 169 bits (427), Expect = 7.460e-46
Identity = 81/126 (64.29%), Postives = 100/126 (79.37%), Query Frame = 0
Query:   37 DSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQRDEQDSFGDAEF 162
            DSYEREFYDMVRTVFLKYALQLRIGRMSG LVAYHNT+E+L LEY  LKEI SYVFG+++W D+AFGT + LL+ +L+ IT  V   + ++ LKV++ TEWS+L MY+FVQ +   EQD FG + F
Sbjct:  386 DSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTSEILGLEYLPLKEINSYVFGSEKWGDIAFGTTMHLLQDVLEKITAEVCQGDPNENLKVVMSTEWSRLHMYIFVQRVVDGEQDPFGPSVF 511          
BLAST of Ggra167.t1 vs. uniprot
Match: A0A7S3EAR2 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EAR2_9RHOD)

HSP 1 Score: 107 bits (267), Expect = 9.060e-24
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0
Query:   11 YHYSQASQFVLRAQIDCRNPGTGEVTDSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDT 115
            YH ++  QF   A    + P    VT SYE EFYDMVR+VF+KYA QLR+G MSG  V +HNT E+L  EY  L+EIE YVFG+  WA+ AFG  +SL + I++T
Sbjct:  383 YHLTRYKQF---ANYKIQYPRG--VTRSYELEFYDMVRSVFMKYAFQLRLGGMSGAFVCFHNTREMLGFEYIRLQEIEQYVFGSSHWAEKAFGFTLSLYQVIMET 482          
BLAST of Ggra167.t1 vs. uniprot
Match: A0A7S0ZFZ6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFZ6_9RHOD)

HSP 1 Score: 101 bits (252), Expect = 9.900e-22
Identity = 45/118 (38.14%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   38 SYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQRDEQD 155
            S+EREFYD++RT F+KYA Q++IGRM+G  VA+HNT E+   EY  ++EI++YVFG + W  +AF  A+ L    ++   +  P    +D +++++    +   ++ FVQ +  +E+D
Sbjct:  456 SFEREFYDLIRTAFIKYAYQIKIGRMNGAFVAFHNTDEIFGFEYVPIEEIDTYVFGGEYWGSIAFDRAVQLYNIFMNHAMSLFPNRKPEDSVRIVICPLKASGSLHFFVQLIPANEED 573          
BLAST of Ggra167.t1 vs. uniprot
Match: A0A6B2KZ11 (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KZ11_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 6.320e-21
Identity = 47/112 (41.96%), Postives = 75/112 (66.96%), Query Frame = 0
Query:   38 SYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHL 149
            S+ERE+YDM+R+ FLKY +Q+++GRM G  VAYHNT +L   EY  LKE+E  +F T++ ADV+F    +LL ++LD +T+       ++ LK+++ T     +M +FV+ +
Sbjct:  254 SFEREYYDMIRSAFLKYIIQVKVGRMDGIFVAYHNTLQLFGFEYIPLKEMEKAIFQTEQMADVSFKVMTTLLGKLLDYLTSRFK----NEVLKMVMQTSMDSQKMKIFVERI 361          
BLAST of Ggra167.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D)

HSP 1 Score: 99.4 bits (246), Expect = 6.550e-21
Identity = 57/122 (46.72%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   35 VTDSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITT---TVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQRDE 153
            + +SYEREFYDMVR+VF+KY++Q RIG M G  +AYHNT EL   EY  L EI+SYVFG    A+  F   + LL  +LD IT     +PL  T   LKV  Y       + +FV+ +Q D+
Sbjct:  628 INNSYEREFYDMVRSVFVKYSMQARIGDMDGMFLAYHNTRELFGFEYLKLSEIDSYVFGNSYMAERFFTLLLDLLRDVLDRITDRFPNIPLKITFRPLKVEPYF------IDIFVEPVQEDK 743          
BLAST of Ggra167.t1 vs. uniprot
Match: A0A5J4YQN5 (mRNA degradation protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQN5_PORPP)

HSP 1 Score: 97.4 bits (241), Expect = 3.050e-20
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0
Query:   32 TGEVTDSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVML 133
            TG++ +S++REF+D++R  F+KYA Q+R+GRM G  + YHNT   L  EY  L E+E YVFG   W +VAF  ++ L  RILD   + VP     D ++VML
Sbjct:  529 TGDM-NSFQREFFDLIRNGFMKYAFQIRLGRMDGAFIIYHNTKTCLGFEYVGLPEMEQYVFGGHWWGEVAFRYSMQLYNRILDHSLSLVPEAQLGDSVRVML 629          
BLAST of Ggra167.t1 vs. uniprot
Match: G0QJA0 (Mitochondrial mRNA processing protein, putative n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QJA0_ICHMG)

HSP 1 Score: 95.5 bits (236), Expect = 1.280e-19
Identity = 48/136 (35.29%), Postives = 79/136 (58.09%), Query Frame = 0
Query:   35 VTDSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQRDEQDSFGDAEFQRRERDAC 170
            +  S+ERE+YD++R  FLKY  QL+IGRM G  +AYHNT E+   EY    EIE+ +FG   +AD +F     +L  +L+ I   +  +N +  LK+ +Y +    ++ VF++    D+Q  + D +  ++ +D C
Sbjct:  353 IHSSFEREYYDLIRGGFLKYCFQLKIGRMDGAFIAYHNTLEMFGFEYVKTTEIENRIFGNTLFADASFVICSKILTNLLNLILDDLHNENFE-MLKIGIYCDQPSKKIVVFIELF--DKQTPWSDKKSMQKTKDIC 485          
BLAST of Ggra167.t1 vs. uniprot
Match: A0A1X0SEH3 (Pet127-domain-containing protein n=5 Tax=Rhizopus TaxID=4842 RepID=A0A1X0SEH3_RHIZD)

HSP 1 Score: 95.5 bits (236), Expect = 1.290e-19
Identity = 47/121 (38.84%), Postives = 77/121 (63.64%), Query Frame = 0
Query:   37 DSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSK--LRMYVFVQHLQRDEQD 155
            +SYERE+YDM+R+ FLKY+ Q+RIG M G LVAYHNT ++   +Y S  E++  +FG+++  D  F  +++LL+ +LDT T   P    +  L++   T   K   +MY++V+ +   ++D
Sbjct:  328 ESYEREYYDMIRSAFLKYSFQVRIGHMDGILVAYHNTRKIFGFQYISRNEMDLRLFGSRKIGDQVFNNSLTLLQTVLDTATQKYP----ESTLRISFNTVPGKDIAKMYIYVEKVPPGKED 444          
BLAST of Ggra167.t1 vs. uniprot
Match: V5ES91 (Uncharacterized protein n=1 Tax=Kalmanozyma brasiliensis (strain GHG001) TaxID=1365824 RepID=V5ES91_KALBG)

HSP 1 Score: 95.5 bits (236), Expect = 1.440e-19
Identity = 50/114 (43.86%), Postives = 70/114 (61.40%), Query Frame = 0
Query:   35 VTDSYEREFYDMVRTVFLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYT-EWSKLRMYVFVQ 147
            V +S+ERE++DMVR  FLKY  Q RIG M G  VAYH T  +   +Y S++E+   +FGTQ  AD AF  ++ L+ER+LD  T+  P    D+ LK+ + T E     M +FV+
Sbjct:  533 VLESFEREYFDMVRAAFLKYNFQARIGHMDGIFVAYHTTASIFGFQYISVEEMNERLFGTQEMADQAFRLSLGLMERVLDATTSIFP----DETLKITVETREKGDAGMTIFVE 642          
The following BLAST results are available for this feature:
BLAST of Ggra167.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISR28.870e-6274.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QNH17.460e-4664.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3EAR29.060e-2452.38Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZFZ69.900e-2238.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A6B2KZ116.320e-2141.96Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D6.550e-2146.72uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A5J4YQN53.050e-2046.08mRNA degradation protein n=1 Tax=Porphyridium purp... [more]
G0QJA01.280e-1935.29Mitochondrial mRNA processing protein, putative n=... [more]
A0A1X0SEH31.290e-1938.84Pet127-domain-containing protein n=5 Tax=Rhizopus ... [more]
V5ES911.440e-1943.86Uncharacterized protein n=1 Tax=Kalmanozyma brasil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013943Mitochondrial protein Pet127PFAMPF08634Pet127coord: 36..114
e-value: 3.8E-26
score: 92.2
IPR013943Mitochondrial protein Pet127PANTHERPTHR31014UNCHARACTERIZEDcoord: 36..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000940_piloncontigtig00000940_pilon:118112..118756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra167.t1Ggra167.t1Gracilaria gracilis GNS1m malemRNAtig00000940_pilon 118112..118756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra167.t1 ID=Ggra167.t1|Name=Ggra167.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=183bp
MNPSADEQQFYHYSQASQFVLRAQIDCRNPGTGEVTDSYEREFYDMVRTV
FLKYALQLRIGRMSGGLVAYHNTTELLALEYFSLKEIESYVFGTQRWADV
AFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQ
RDEQDSFGDAEFQRRERDACLYSSRILYSCAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013943Pet127