Ggra1666.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1666.t1
Unique NameGgra1666.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Homology
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BLAST of Ggra1666.t1 vs. uniprot
Match: R7QKI8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKI8_CHOCR)

HSP 1 Score: 112 bits (279), Expect = 7.000e-26
Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 0 
Query:    5 RGRQPRQSLVSASLHQSIVEFAHKIGSPS-LHTDFRDFSGWNQRISGAQYEPAWRQLAQEVLRSSQDVGSNRLSDLKRDVIFNIMPLVVKKKPHETDKMVSTNARRQLINNKTSKQPTLMTMLEKHI 130
            RGRQPRQSLVS ++HQSI +FA+ IG P  +   FRD+SGW   ISG +Y+ AW  L +   +    V    +  LKRDV+ +I+ +VV K+PHE+ K+VSTNARRQ    + S   ++MT+ EKH+
Sbjct:   74 RGRQPRQSLVSPTMHQSISQFANVIGGPVFVPAGFRDYSGWLSTISGPRYQLAWSNLVRAFTQECATVEQKTIPQLKRDVVTDIVNMVVDKRPHESAKLVSTNARRQC-ETRPSGGISVMTIFEKHL 199
The following BLAST results are available for this feature:
BLAST of Ggra1666.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QKI87.000e-2648.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:295221..295976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1666.t1Ggra1666.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 295221..295976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1666.t1 ID=Ggra1666.t1|Name=Ggra1666.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MKKRRGRQPRQSLVSASLHQSIVEFAHKIGSPSLHTDFRDFSGWNQRISG
AQYEPAWRQLAQEVLRSSQDVGSNRLSDLKRDVIFNIMPLVVKKKPHETD
KMVSTNARRQLINNKTSKQPTLMTMLEKHIEQLNSMSGRSSGAGSSSMAH
ALAMSSSSAMGAHAAPRANHSSTGDFRRGDRGSSSGSSSRSGDRHSVRTS
TAMEIATLLSGEASSSGAASSSHHLLPSFTQLDAHIQARKEREKRDKRHR
R*
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