Ggra166.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra166.t1
Unique NameGgra166.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length621
Homology
BLAST of Ggra166.t1 vs. uniprot
Match: A0A2V3IF30 (Ubiquinol oxidase 4, chloroplastic/chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF30_9FLOR)

HSP 1 Score: 691 bits (1783), Expect = 4.260e-238
Identity = 354/464 (76.29%), Postives = 398/464 (85.78%), Query Frame = 0
Query:  161 SKAPASQNKXXXXXXXXXXXXAPV--TSNADRTE-RSTRRFGRRKEPLATDEHTRRAALSSKSFRNRLGRGANKESLLTKAQEVPEDLPDLPDMGTDKTEAARSKLEKHSHQEAK-----IKSRRKGKRQHSSLFGKKSS-SSAANVASDTSESVEDEPKAPEDPAPLDILRTARISKKMFEGEIAHKYAPVQFTPFGQDWATDSFALIHNAIKAEVRDLQNMAYVMQRRKMLLTLTHIDIFYEWWADFNQFLDVAITIEEEVYYGWVGSKDSLRGPFKRSERMRVYGATRNTIQKLTEYKEKFLPYLPVGERLEGLLVLIKGFDQLLQHHSDVARSLPNYLQTLFNKKEKESNLKAVIAAFRNSDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLISFKGWRTVITREHCNLVKQFEDVITGEEDNFGEPVIGAAMAINEEMREHIDNNRSSVRALPNGNGV 615
            + +P S NK             P   T+N DRTE RSTRRFGRRKEP+  +EH+RRAALSSKSFRNRLGRG+NKESLLTKA+EV E LP+LPD+GTDKTEAAR KLE+     A      +KSRRKGKRQHSSLFGK+SS SS+ANV+SDTS+SV + P  P +P PLDILRTARISKKMFEGEI HKYA VQ T +GQDWATDSFAL+HNA+KAE+R+L NMAYVMQRRKMLLT+TH+++FYEWW+DF++FLDVA+TIEEEVYY WV SKD LRG FKRSERMRVYGATR  IQ ++EYKEKFLPYLPVGERLEGLLVL+KGFDQLLQHH +VAR+LPNYLQTLFNKKEKE+NLK +IAAFRNSDGYNRNLVLL KWMPDRMMKRWALSHLRTK L+SFKGWR VIT+EHCNL K FE++IT EE+N GEPVIGAAMAINEEMREHID NR+SVRALPNGNGV
Sbjct:   17 ASSPLSDNKPATPAKPPRPGSMPASSTTNTDRTEHRSTRRFGRRKEPVGPEEHSRRAALSSKSFRNRLGRGSNKESLLTKAKEVAESLPELPDVGTDKTEAARKKLEQSQKSSAAEGDKPLKSRRKGKRQHSSLFGKRSSTSSSANVSSDTSDSVNEAP--PPEPEPLDILRTARISKKMFEGEITHKYAQVQMTAYGQDWATDSFALLHNAMKAEIRELHNMAYVMQRRKMLLTMTHVEVFYEWWSDFHEFLDVALTIEEEVYYTWVSSKDYLRGAFKRSERMRVYGATRKCIQGISEYKEKFLPYLPVGERLEGLLVLMKGFDQLLQHHDEVARALPNYLQTLFNKKEKEANLKEIIAAFRNSDGYNRNLVLLVKWMPDRMMKRWALSHLRTKGLMSFKGWRNVITKEHCNLAKHFEEMITSEEENVGEPVIGAAMAINEEMREHIDKNRTSVRALPNGNGV 478          
BLAST of Ggra166.t1 vs. uniprot
Match: R7QDF4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDF4_CHOCR)

HSP 1 Score: 417 bits (1072), Expect = 1.330e-137
Identity = 225/433 (51.96%), Postives = 290/433 (66.97%), Query Frame = 0
Query:  200 RRKEPLATDEHTRRAALSSKSFRNRLGRGANKESLLTKAQEVPEDLPDLPDMGTD---------KTEAARSKLEKHSHQEAKIKSRRKGKRQHSSLFGKKSSSSAANVASDTSESVEDEPKA-----------PEDPAPLDILRTARISKKMFEGEIAHKYAPVQFTPFGQDWATDSFALIHNAIKAEVRDLQNMAYVMQRRKMLLTLTHIDIFYEWWADFNQFLDVAITIEEEVYYGWVGSKDSLRGPFKRSERMRVYGATRNTIQKLTEYKEKFLPYLPVGERLEGLLVLIKGFDQLLQHHSDVARSLPNYLQTLFNKKEKESNLKAVIAAFRNSDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLISFKGWRTVITREHCNLVKQFEDVITGE-EDNFGEPVIGAAMAINEEMREHIDNNRSSVRALPN 611
            RR    + +E  RRAALSSKSFRNR+     K  L  K  ++PE++ +L               + E   SK E    ++A+     K  R  S  F K+++S  A   SD S+  E+E              PE  A +DILRTARISK     ++ +KY  V+ TP+G  WA DSFALIHNAIKAE+RDL  +  VMQRRK+LLT+ HI++FYEWWADF +F   A++IEE+V+Y WV SKD LRG FK++ERMRV GATRN +  +++Y++KFLPYLPVGERL+GLLV    F  LL+H+  +A SLP Y++TLF +KE+++ +K ++A FR  DGYNRNLVLL +WMPDR M+RWALSHL+ KDLI FKGWR VI  EHC L   FE+++ G  E++ G PVIGAAMAINEEMREHI+ NR SVR+LPN
Sbjct:    2 RRGAEPSPEETQRRAALSSKSFRNRI---TGKGDLFVKGPDLPEEVKELXXXXXXXXXXXXXXLEREEGLSKKELRKSKKARXXXXXKASRG-SGRFSKRTNSKLAGSVSDISDGKEEEEDEGETMVTQLEPEPEPIAEMDILRTARISKTAVAMDLIYKYPEVKLTPYGSGWAMDSFALIHNAIKAEIRDLFEIGNVMQRRKLLLTMEHIEVFYEWWADFKEFTLEALSIEEDVFYTWVASKDYLRGAFKKTERMRVNGATRNLVTNISDYRDKFLPYLPVGERLDGLLVQFNEFKTLLEHYDAIAASLPAYIETLFKQKERDATVKELVAEFRRRDGYNRNLVLLVRWMPDRNMRRWALSHLKPKDLIHFKGWRRVIQEEHCRLALSFENIVMGPAEEDMGAPVIGAAMAINEEMREHINKNRVSVRSLPN 430          
BLAST of Ggra166.t1 vs. uniprot
Match: A0A1X6NIZ5 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIZ5_PORUM)

HSP 1 Score: 140 bits (352), Expect = 4.260e-34
Identity = 71/231 (30.74%), Postives = 122/231 (52.81%), Query Frame = 0
Query:  340 YAPVQFTPFGQDWATDSFALIHNAIKAEVRDLQNMAYVMQRRKMLLTLTHIDIFYEWWADFNQFLDVAITIEEEVYYGWVGSKDSLRGPFKR-SERMRVYGATRNTIQKLTEYKEKFLPYLPVGERLEGLLVLIKGFDQLLQHHSDVARSLPNYLQTLFNKKEKESNLKAVIAAFRNSDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLISFKGWRTVITREHCNLVKQF 569
            +  V   P+G +WA+D    +HNA++ E  DL  +  +MQR++  LT   +D+F+EWW DF  F   ++  E EV +  + ++ +L     R S RM   G     ++K+++++  F P+LP GE L  L+ L+     +  +++    +LP  +   F K+ K S  +A+    R +D Y+ NLVLL +W+      +W + +L+  + +SF GWR    R H  +V  F
Sbjct:   16 FPKVSLAPYGTNWASDVVVFLHNAVRREFMDLYALLDLMQRKRRTLTHDLVDVFFEWWTDFETFCVASVNAETEVIFPPLTARTALTASAVRDSARMLANGKFVVGLRKVSDFRPSFTPHLPAGEVLPRLVALVAELSFIHGYYAAQEAALPPLIAAHFRKRNKASWERALTDHMRYADSYDMNLVLLTRWLRPSADTKWRVRNLKPAEHLSFGGWRRDAERNHLQIVDFF 246          
The following BLAST results are available for this feature:
BLAST of Ggra166.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IF304.260e-23876.29Ubiquinol oxidase 4, chloroplastic/chromoplastic n... [more]
R7QDF41.330e-13751.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NIZ54.260e-3430.74Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..285
NoneNo IPR availablePANTHERPTHR13037:SF21PROTEIN CAPPUCCINOcoord: 4..318
NoneNo IPR availablePANTHERPTHR13037FORMINcoord: 4..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000940_piloncontigtig00000940_pilon:77904..79766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra166.t1Ggra166.t1Gracilaria gracilis GNS1m malemRNAtig00000940_pilon 77904..79766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra166.t1 ID=Ggra166.t1|Name=Ggra166.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=621bp
MGPPPPPPPPPPALPRRKINAPPPPSSSRPAASPAPPPPPARSAPPAAPA
PPPPPSRSAPSGAPAPPPPPPPSSARASGGGGGGAPPPPPPPPPPPPPSG
NKSGSSAPPPPPPPPPAPSGASSKGGAPPPPPPPPPSSKSSRPASMPPPP
PPLKPSASRSSKAPASQNKPATPAKPPRPGSAPVTSNADRTERSTRRFGR
RKEPLATDEHTRRAALSSKSFRNRLGRGANKESLLTKAQEVPEDLPDLPD
MGTDKTEAARSKLEKHSHQEAKIKSRRKGKRQHSSLFGKKSSSSAANVAS
DTSESVEDEPKAPEDPAPLDILRTARISKKMFEGEIAHKYAPVQFTPFGQ
DWATDSFALIHNAIKAEVRDLQNMAYVMQRRKMLLTLTHIDIFYEWWADF
NQFLDVAITIEEEVYYGWVGSKDSLRGPFKRSERMRVYGATRNTIQKLTE
YKEKFLPYLPVGERLEGLLVLIKGFDQLLQHHSDVARSLPNYLQTLFNKK
EKESNLKAVIAAFRNSDGYNRNLVLLAKWMPDRMMKRWALSHLRTKDLIS
FKGWRTVITREHCNLVKQFEDVITGEEDNFGEPVIGAAMAINEEMREHID
NNRSSVRALPNGNGVAAGKS*
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