Ggra1642.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1642.t1
Unique Name	Ggra1642.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	778

Homology

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BLAST of Ggra1642.t1 vs. uniprot
Match: A0A2V3IJC4 (NEDD4-like E3 ubiquitin-protein ligase WWP1 n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC4_9FLOR)

HSP 1 Score: 1014 bits (2622), Expect = 0.000e+0
Identity = 512/757 (67.64%), Postives = 599/757 (79.13%), Query Frame = 0

Query:   26 KKVRMQVIPHDEPSKPVDTFHVTISNVRATLRVAEARPVILKFAFDNYWHAETDVFTRDSVNPSWRFNLNSVCGLDGRKPATADGLAP-QLAPDADPIQPSARFVYETEFGYKLHRKYLIVTLCERSPYQDVVWGTGIVPLDSVARGCEALNMSIFAKDALKHYGNVFCNITMTNVQRVRAHLTDLRLSEYPEIFSYDVKLIYIEFGLHAFDRGFHRSTEKRSDAEPRFSAQPALEFDTTLRDMLISSTPNAPSLKIFFSVHRQVARNRTEQIGVGALPVRMLFSKVRDGWMGLPTKFRVPLAEYRGIIRGKVLLRNIPQFSQLPGCDLTNVDGTIMPQHVDLDNRRLLPWVKLPKAEERRLRLANGQDSNQSPMRKPHHHFATSASDSLDEKSMNLESVLEHGAQPQFHQVPT-LNVREGEFHTPVS-ESEGGSEPSSRATSPRVDGRLFAAVDSAFVRDTHGKRSPLPQKTHQGE--QHVPRAHESPSTVQRPAWTIQETGDDSTSTICKLRDKVNPHVVSHVEQIKLFGALREANKDGDGESYEELSRLRISASPGRSKPRQHSDESSSSRFPPSRASDGTYDDHDSQSDMRSRQNKSGKSFGSSCTTEAGTELESTVLSEDSCQVGSRTTTQDALTTNQKLNGYPPADERYEYEVDELAAGYDVSPDAPAPDGHLNDASLEGG-DEWLAVHDPGSSRFYFAHRYTQESLWLPPEWERMVDEEGRQYFVDHASQTTQWAFPATEARAYRESVYA 776
            KKVRMQVIP +EP+KPVDTFHV+ISNV A LR+AE+RPVILKFAFDNYWHAETDVFT+DSV P W FN +++ G DGRKPA ADG AP Q +   +P+QPS  FVYET+FGYKLHRKYLIVTLCERSPYQDV WGTG++PLDS+ARGCE+++MSI AKD L +YGNV+CNITMTNVQRVRAHLTDL+LSEYPE+FSYDVKLIY+EFG  AF+ GF R TE+RSDAEPRFSAQPAL++DTTLRDML++STPNAP++ IFFSVHRQVARNRTE+IGVGALP+RMLFSK+RDGWM LPTKFRVPLA YRGIIRGKVLLRNIPQFSQLPG DLTNVDG IMP HVDL +R+LLPW+KLPK+ E+R ++A    + Q P    HHH   S SD   +     E  +   +QPQ  Q    L     +   P S E +GGSEPSS  TSPR+  R F A+D+  +RD   KR+ +P +T Q E  QH   AH SPSTVQR +W + ++GDDSTSTI KLR KV+P   SHVEQIKLF ALREA++D +GES EELS+LRIS SPGRSKPRQHSDESSSSR P SRASDGT D  +S  DM++R+NKSGKSFGSSCTTE G E+ STVLS+D    GSRT  QDA   NQKL    P +E+Y+YE +++    + SPD   P   L + + +   DEW A+HDPGSSR+YFAHRYTQESLWLPP WERMVDE+G+QYFVDHAS++TQW FPATEAR+YRESVYA
Sbjct:   33 KKVRMQVIPDEEPTKPVDTFHVSISNVHAVLRIAESRPVILKFAFDNYWHAETDVFTKDSVQPQWNFNTDTIRGFDGRKPAAADGTAPHQQSAPTNPVQPSTSFVYETQFGYKLHRKYLIVTLCERSPYQDVEWGTGVIPLDSIARGCESVDMSIVAKDGLTYYGNVYCNITMTNVQRVRAHLTDLKLSEYPEVFSYDVKLIYLEFGTRAFENGFCRCTERRSDAEPRFSAQPALQYDTTLRDMLVTSTPNAPAIMIFFSVHRQVARNRTEEIGVGALPIRMLFSKIRDGWMNLPTKFRVPLANYRGIIRGKVLLRNIPQFSQLPGSDLTNVDGVIMPVHVDLQSRKLLPWIKLPKSTEKRRQMATENQATQLPYGVNHHHLTPSVSDKSVQSETTREPSVPPTSQPQPAQPQQQLQAPPDQPRDPHSTEYDGGSEPSSNTTSPRLQRRPFPAMDTFVLRDNLKKRAAVP-RTQQIEPPQHDTGAHGSPSTVQRSSWAVSDSGDDSTSTISKLRSKVDPRASSHVEQIKLFAALREASRDNEGESCEELSKLRISDSPGRSKPRQHSDESSSSRVPTSRASDGTCDGRESPPDMQARRNKSGKSFGSSCTTEGGVEVGSTVLSDDGYLTGSRTNPQDA---NQKLTRCAPGEEQYDYEEEDIRETCETSPDTSLPGLDLAEGAYDDDEDEWQAIHDPGSSRYYFAHRYTQESLWLPPGWERMVDEDGKQYFVDHASRSTQWRFPATEARSYRESVYA 785

The following BLAST results are available for this feature:

BLAST of Ggra1642.t1 vs. uniprot

BLAST of Ggra1642.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJC4	0.000e+0	67.64	NEDD4-like E3 ubiquitin-protein ligase WWP1 n=2 Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 733..765 e-value: 7.8E-6 score: 35.4
IPR001202	WW domain	PFAM	PF00397	WW	coord: 734..760 e-value: 1.3E-7 score: 31.5
IPR001202	WW domain	PROSITE	PS01159	WW_DOMAIN_1	coord: 738..763
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 732..765 score: 14.4419
IPR001202	WW domain	CDD	cd00201	WW	coord: 735..763 e-value: 7.08177E-7 score: 44.0558
None	No IPR available	GENE3D	2.20.70.10		coord: 734..765 e-value: 8.5E-11 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 562..631
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 504..523
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..523
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 601..616
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 617..631
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 726..765

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000050_pilon	contig	tig00000050_pilon:239177..241510 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1642.t1	Ggra1642.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000050_pilon 239177..241510 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1642.t1 ID=Ggra1642.t1|Name=Ggra1642.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=778bp
MAQTTEPPPPVSPLPSVSNPRAKNKKKVRMQVIPHDEPSKPVDTFHVTIS
NVRATLRVAEARPVILKFAFDNYWHAETDVFTRDSVNPSWRFNLNSVCGL
DGRKPATADGLAPQLAPDADPIQPSARFVYETEFGYKLHRKYLIVTLCER
SPYQDVVWGTGIVPLDSVARGCEALNMSIFAKDALKHYGNVFCNITMTNV
QRVRAHLTDLRLSEYPEIFSYDVKLIYIEFGLHAFDRGFHRSTEKRSDAE
PRFSAQPALEFDTTLRDMLISSTPNAPSLKIFFSVHRQVARNRTEQIGVG
ALPVRMLFSKVRDGWMGLPTKFRVPLAEYRGIIRGKVLLRNIPQFSQLPG
CDLTNVDGTIMPQHVDLDNRRLLPWVKLPKAEERRLRLANGQDSNQSPMR
KPHHHFATSASDSLDEKSMNLESVLEHGAQPQFHQVPTLNVREGEFHTPV
SESEGGSEPSSRATSPRVDGRLFAAVDSAFVRDTHGKRSPLPQKTHQGEQ
HVPRAHESPSTVQRPAWTIQETGDDSTSTICKLRDKVNPHVVSHVEQIKL
FGALREANKDGDGESYEELSRLRISASPGRSKPRQHSDESSSSRFPPSRA
SDGTYDDHDSQSDMRSRQNKSGKSFGSSCTTEAGTELESTVLSEDSCQVG
SRTTTQDALTTNQKLNGYPPADERYEYEVDELAAGYDVSPDAPAPDGHLN
DASLEGGDEWLAVHDPGSSRFYFAHRYTQESLWLPPEWERMVDEEGRQYF
VDHASQTTQWAFPATEARAYRESVYAG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom
IPR036020	WW_dom_sf