Ggra1637.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1637.t1
Unique NameGgra1637.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length214
Homology
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A2V3IJ92 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ92_9FLOR)

HSP 1 Score: 253 bits (645), Expect = 2.340e-82
Identity = 130/212 (61.32%), Postives = 152/212 (71.70%), Query Frame = 0
Query:    1 MRNAAFASTIALRQISFSQSFISCRRKRFNPVRSHVHQRSTIIASSPTEPPSAPETPAEQTETTLILESEALDPSSGSVVVPATFNLAGAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVAQKTGEGLKLIRGWQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKRTPHLDKKQY 212
            M   AF   I L   S  Q   +   +R +  +  V QRS I+A +  EP        EQTETT ILE EALDP S +VVVP +FNLA  F+FSGGLCVYLGDGWLV G P+L +G+ LS+Q+ RIR +FGPTRLSVA+ TG GL+LIRGW+Y+ ITNWE WWKR+P+LVYFKE ESY GRGSIHFFPIL KGDVLL +  KRTPHLDK QY
Sbjct:    1 MTAKAFVPCIPLTVKSTYQLCRTVPSRRLSLSQRKVPQRSVIVAEATNEPXXXXXXADEQTETTFILEEEALDPGSDTVVVPGSFNLAAFFMFSGGLCVYLGDGWLVPGFPILLVGILLSVQSTRIRIVFGPTRLSVARITGSGLELIRGWKYKDITNWEFWWKRLPVLVYFKEKESYYGRGSIHFFPILTKGDVLLEQFIKRTPHLDKSQY 212          
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A5J4Z4B1 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4B1_PORPP)

HSP 1 Score: 120 bits (300), Expect = 4.700e-30
Identity = 61/132 (46.21%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   74 PSSGSVVVPATFNLAGAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVAQKTGEG-LKLIRGWQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKRT 204
            P     V+  T+ +   F       +  G+GW VA  PL   G FL LQT  +RF+F  T L VA+K+  G LK IR W+ + ITNWEMWW+  P+L YFKE  SY+GRGSIHFFP+L+ G  L+   + RT
Sbjct:   89 PKESDQVLKTTYAIPAVFCGLAAAGLLKGEGWSVAAFPLALFGPFLLLQTSVVRFVFTDTELVVAKKSAGGKLKYIRAWKLDDITNWEMWWEPFPVLCYFKEKGSYDGRGSIHFFPMLFDGKQLVHCFQTRT 220          
BLAST of Ggra1637.t1 vs. uniprot
Match: M1V7H1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V7H1_CYAM1)

HSP 1 Score: 90.9 bits (224), Expect = 7.230e-19
Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = 0
Query:   78 SVVVPAT-FNLAGAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQT-FRIRFIFGPTRL---------SVAQKTGE-----GLKLIRGWQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKRTPHLDKKQY 212
            S+ +P T   +AG    +GG     G G + A +P+  LG+FL +   F +RF FGP  +         SV    G+     G + +RGW Y+ I  W++WW R P+L YF+ESESY+GRGSIHF P+++     L    +RT   D  ++
Sbjct:   82 SLKLPVTVLGIAGVLAGAGG-----GAGKVFA-VPVGLLGVFLVVNAGFLLRFRFGPDAIEVWKRGAADSVQPTAGDDAALRGYRYVRGWHYDRIEYWKLWWPRFPVLFYFRESESYDGRGSIHFLPVVFDAQQWLRGFSERTQRKDSGRF 226          
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A5J4Y0U9 (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y0U9_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 2.700e-17
Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  114 FLGLFLSLQTFRIRFIFGPTRLSVAQKTGEGL------KLIRG---WQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKR 203
            FLG FL+ Q  R++F+F    L V  K+ +        K + G   W Y+  TNWE WWK+ P+LVYFKE+++    G IHFFP+L+KGD L   + +R
Sbjct:   99 FLGAFLAFQASRVQFVFDDEGLEVLIKSKDDKAEESENKFVGGQNRWNYDAFTNWEFWWKKFPVLVYFKETQT-KPEGQIHFFPVLFKGDQLYNVMAER 196          
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A6I9QP04 (uncharacterized protein LOC105037236 isoform X2 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QP04_ELAGV)

HSP 1 Score: 85.5 bits (210), Expect = 5.280e-17
Identity = 48/143 (33.57%), Postives = 74/143 (51.75%), Query Frame = 0
Query:   70 EALDPSSGSVVVPATFNLAGAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVA-----QKTGEGLKLIRG---WQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKRT 204
            E + P     +      +AG FV+   L         +   P+  LGLFL +QT R++F+F    L V      Q++GE +  + G   W+Y T  NWE+WW + P+LVYFKE+++    G +HFFP+L+ G  L   + +R 
Sbjct:   68 EVVVPDPDYRIPVVLLGIAGGFVYQNNL---------LPAAPIGLLGLFLLIQTTRVKFVFDEEALEVKIGDQLQESGENV-FVGGKNRWKYSTFVNWELWWPQFPVLVYFKETQT-KPEGQVHFFPVLFNGKQLYDVMLERA 199          
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A7J7IFY7 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFY7_9RHOD)

HSP 1 Score: 85.1 bits (209), Expect = 6.250e-17
Identity = 49/142 (34.51%), Postives = 77/142 (54.23%), Query Frame = 0
Query:   86 NLAGAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQT-FRIRFIFGPTRLSVAQK--TGE------------GLKLIRGWQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKRTPHLDKKQY 212
             L+G    +GG     G G + A +P+  LG+FL +     +RF FGP  + V ++  +GE            G   +RGW Y+ I  W++WW R P+L YF+E+ESY+GRGSIHF P+++     L    +RT   + +++
Sbjct:   63 GLSGVLAGAGG-----GAGKVFA-VPVGLLGVFLVINAGLLLRFRFGPDSIEVWRRGSSGESQVAGVKDAALDGYHYVRGWHYDRIEYWKLWWSRFPVLFYFRETESYDGRGSIHFLPVVFDTQQWLRGFEERTQRKETQRF 198          
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A250XKB3 (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKB3_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 5.420e-16
Identity = 51/134 (38.06%), Postives = 70/134 (52.24%), Query Frame = 0
Query:   74 PSSGSVVVPATFNLAGAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVAQKTGEGLKLIRG----WQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKR 203
            P   +VV   +FN+  + V    L  Y  +GW         LG+FLS+Q  RIRF+F    LSV +   E   +  G    W YE+  NWE W+   P+LVYFKES++    G IHFFPI++ G  L   + +R
Sbjct:   49 PPRPTVVPEPSFNIPISLVAISALEGY--EGWTGLAAFTAVLGIFLSIQATRIRFLFDDEGLSVIRAGEETENVFVGGSNKWSYESFINWEYWFPGFPVLVYFKESQT-KPEGQIHFFPIIFNGKQLYDVMAER 179          
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A2V0P460 (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P460_9CHLO)

HSP 1 Score: 81.6 bits (200), Expect = 1.130e-15
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 0
Query:   68 ESEALDPSSGSVVVPATFNLAGAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVA-----QKTGEGLKLIRG---WQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKR 203
            ++ A  P   +V+   ++N+    +   GL  + G   L A   LL  G+FL++Q  R++F+F    L V      +K  E  K + G   W Y+T  NWE WW   P+LVYFKES++    G IHFFPI++ G  L   +R+R
Sbjct:   45 KAPAKAPPRPTVIPSPSYNVPLGLLAISGLSAFEGATPLAALTGLL--GIFLTIQAGRVKFVFDDEALEVVIAGKEEKETEN-KFVGGRNRWTYDTFINWEFWWPSFPVLVYFKESQT-KPEGQIHFFPIIFNGKELYDVMRER 184          
BLAST of Ggra1637.t1 vs. uniprot
Match: A0A383VVU7 (Uncharacterized protein n=3 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VVU7_TETOB)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-15
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 0
Query:   69 SEALDPSSGSVVVPATFNLAGAFVFSGGLCVYLGDGWL--VAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVA------QKTGEGLKLIRG-WQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKR 203
            S+A  P   +V+   + N+    +   GL  Y G   L  +AG+    LG+FLS+Q+ R++F+F    L V       Q+T       R  W+Y+T  NWE+WW   PILVYFKE+++    G IHFFP+++ G  L   + +R
Sbjct:   48 SKAAPPKRATVIPEPSLNVPLGLLAISGLSAYEGVTPLAVIAGI----LGVFLSIQSTRVKFVFDDDSLEVVIAGKEEQETENAFVGGRNRWRYDTFVNWELWWPGFPILVYFKETQT-KPEGQIHFFPVIFNGRQLYDVMVER 186          
BLAST of Ggra1637.t1 vs. uniprot
Match: A8I7F2 (Predicted protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8I7F2_CHLRE)

HSP 1 Score: 79.7 bits (195), Expect = 5.430e-15
Identity = 49/125 (39.20%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   84 TFNLA-GAFVFSGGLCVYLGDGWLVAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVAQKTGEGLKLIRG----WQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTELRKR 203
            +FNL  G    SG  C Y   G    G  L  LG+FL++Q  RIRF+F  T L V +   E   +I G    W+Y +  NWE W+   P+LVYFKE+++    G +HFFPI++ G  L   + +R
Sbjct:   59 SFNLQLGLLGLSGVSCYYENYG---LGGFLGLLGIFLTIQATRIRFVFDDTGLEVLRAGQESENVIVGGRNRWEYSSFINWEFWFPGFPVLVYFKENQT-KPEGQVHFFPIIFNGKQLYEAMVER 179          
The following BLAST results are available for this feature:
BLAST of Ggra1637.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJ922.340e-8261.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z4B14.700e-3046.21Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M1V7H17.230e-1936.42Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A5J4Y0U92.700e-1742.42Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A6I9QP045.280e-1733.57uncharacterized protein LOC105037236 isoform X2 n=... [more]
A0A7J7IFY76.250e-1734.51Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A250XKB35.420e-1638.06Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A2V0P4601.130e-1535.42Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A383VVU71.180e-1535.42Uncharacterized protein n=3 Tax=Scenedesmaceae Tax... [more]
A8I7F25.430e-1539.20Predicted protein n=2 Tax=Chlamydomonas TaxID=3052... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021467Protein of unknown function DUF3119PFAMPF11317DUF3119coord: 79..204
e-value: 1.8E-29
score: 102.6
IPR021467Protein of unknown function DUF3119PANTHERPTHR35550FAMILY NOT NAMEDcoord: 36..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..103
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..24
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 99..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:126080..126721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1637.t1Ggra1637.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 126080..126721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1637.t1 ID=Ggra1637.t1|Name=Ggra1637.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=214bp
MRNAAFASTIALRQISFSQSFISCRRKRFNPVRSHVHQRSTIIASSPTEP
PSAPETPAEQTETTLILESEALDPSSGSVVVPATFNLAGAFVFSGGLCVY
LGDGWLVAGLPLLFLGLFLSLQTFRIRFIFGPTRLSVAQKTGEGLKLIRG
WQYETITNWEMWWKRVPILVYFKESESYNGRGSIHFFPILYKGDVLLTEL
RKRTPHLDKKQYD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021467DUF3119