Ggra1634.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1634.t1
Unique NameGgra1634.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length357
Homology
BLAST of Ggra1634.t1 vs. uniprot
Match: A0A2V3IJB4 (Nudix hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJB4_9FLOR)

HSP 1 Score: 439 bits (1129), Expect = 2.100e-151
Identity = 220/345 (63.77%), Postives = 259/345 (75.07%), Query Frame = 0
Query:   19 RSASLRRQGFRSVSG-------PEAKTARQSTTYIAPDMTPPTXXXXXXXXTALXXXXXXXXGIAGFAIPGGLAPRRETEEILSRRVAERLEVFSESDPHQRIDGPFHIDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEEARFIIRPRVYAIGQPFFFHYVYANGTREQRIDKQWTQAYVILPRGDALDFRSLDDIDAQATQSYGENLRYQGMSIPEVVRHGVQKPDYFCNKVLVKWILRTIPLVIRVLKTKEKRLFRAHLKEQWGSLVQSGSPVCCRSSEHELDVESVDVSACGIPCEKHTIDVSDEEAFT 356
            R+AS RR G RS+         P+  +   + +  AP   P          TAL         IA F IPGGL PRR TEEILSRRVAE L+VFSE DP++R+ GP+ ID +HRKGLVH G+W+FALDS LRLLLAWR+PS  TCPMTW+ IGEHS+TNET E+T  RGL+EEARFI+RPRVY +GQPF F YVYANGTRE+R D QWTQAYVILPRGDALDFRSLDD +A+A QS GENLRYQGMS+P+VV H  QKP +FC++V  +WILRTIPLV RVLK  EKRLFRAHLK+ W  LVQ  SPVCCR+SEHE+DV+SVDVSACG+PC+ +T+D SD +  T
Sbjct:   18 RTASQRRPGPRSLYAYLARNRPPQESSLTSNMSRSAPSPPP------RISQTALFFAFLVLLCIAEFGIPGGLTPRRATEEILSRRVAEELDVFSEKDPNKRVGGPYSIDTVHRKGLVHRGIWIFALDSQLRLLLAWRAPSMKTCPMTWSLIGEHSITNETMEQTAYRGLSEEARFIVRPRVYPVGQPFLFRYVYANGTREERTDNQWTQAYVILPRGDALDFRSLDDAEAEAAQSVGENLRYQGMSVPQVVHHITQKPRFFCSQVQSEWILRTIPLVTRVLKANEKRLFRAHLKDDWAELVQKRSPVCCRASEHEVDVQSVDVSACGVPCKNNTVDPSDIDVLT 356          
BLAST of Ggra1634.t1 vs. uniprot
Match: R7QCM6 (Nudix hydrolase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCM6_CHOCR)

HSP 1 Score: 362 bits (928), Expect = 1.260e-120
Identity = 167/270 (61.85%), Postives = 212/270 (78.52%), Query Frame = 0
Query:   75 IAGFAIPGGLAPRRETEEILSRRVAERLEVFSESDPHQRIDG-PFHIDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEEARFIIRPRVYAIGQPFFFHYVYANGTREQRIDKQWTQAYVILPRGDALDFRSLDDIDAQATQSYGENLRYQGMSIPEVVRHGVQKPDYFCNKVLVKWILRTIPLVIRVLKTKEKRLFRAHLKEQWGSLVQSGSPVCCRSSEHELDVESVDVSACGIPCE 343
            IA FA+PGGL PRRE E+IL++RVAE+L++ S  DP+  + G P  ID +HR+ LVH G WMFALDSHLRLLL WR+P   TCPMTW P+GEH++ NETFEE   RGL EEA FI RPR+Y +G PF++H+VY NGT+++R D QWTQAYV+LPRGDALDFR+LDD DAQ   +  EN RYQGMS+P+VVRH +Q+P+YFC++  V WIL+ IPLV+R L+T + RLFR +L+E+W +LV+SGSPVCC  SE+   V  V+VS CG+PCE
Sbjct:   91 IAEFALPGGLTPRREKEKILAKRVAEQLDLISPDDPNVVLPGGPIPIDRVHRQALVHRGSWMFALDSHLRLLLTWRAPEMKTCPMTWAPVGEHAIVNETFEEAATRGLEEEAAFIPRPRIYPVGIPFYYHHVYDNGTKDERTDNQWTQAYVVLPRGDALDFRTLDDRDAQIGTADVENTRYQGMSLPDVVRHAIQRPEYFCHETQVMWILQVIPLVVRTLETYDMRLFRGYLQEEWTTLVESGSPVCCAESENLKPVPEVNVSLCGVPCE 360          
BLAST of Ggra1634.t1 vs. uniprot
Match: A0A7S0CHJ1 (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHJ1_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.950e-16
Identity = 54/193 (27.98%), Postives = 98/193 (50.78%), Query Frame = 0
Query:  119 HIDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEEARFII-RPRVYAIGQ----PFFFHYVYANGTREQRIDKQWTQAYVILPRGDALDFRSLDDIDAQATQSYGENLRYQGMSIPEVVRHGVQKPDYFCNKVLVKWILRTIPLVIRVLKTKEKRLFRAHLK 306
            HID  HR+GL+HHG W+  +DS+ +LL+  R P  +TCP +W+P+GEH +  E+  +T  RG+ EE   I+ R  V   G     P ++   Y     E R+D+Q T  Y +  +       ++ ++D++          +    + E+     + PD FC++ +V+ +  ++  +   LK  ++   RA ++
Sbjct:   63 HIDAAHRQGLIHHGAWILLIDSNQKLLMLKRGPQLITCPNSWSPMGEHRLRYESIIDTVKRGMNEELGPIVWRRYVKRAGNLTSLPLYYIRDYGEAN-ENRVDRQVTWIYHVQLKSPGETVGNVMNLDSEVAD-------WGWFGVNEIEEWLQRTPDDFCHETIVQMLKISLDSLGESLKRHDQVNIRAEIE 247          
BLAST of Ggra1634.t1 vs. uniprot
Match: A0A7S0IKS3 (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IKS3_MICPS)

HSP 1 Score: 75.1 bits (183), Expect = 7.240e-12
Identity = 47/130 (36.15%), Postives = 66/130 (50.77%), Query Frame = 0
Query:  120 IDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEEARFIIRPRVYAIGQ----PFFFHYVYANGTRE--QRIDKQWTQAYVILPRGDA---LDFRSLDDI 240
            ID  HRKGL H GVW   +D   R++L  R   T+TCP TW+ +GEH+   E++ E   RG+ EE        V A  +        +  Y +  RE  QR D QWT  YV+  +  A   +D + +DD+
Sbjct:   42 IDSAHRKGLPHRGVWAVVIDGKKRVVLIRRGKDTVTCPGTWSIVGEHNDPGESYFEALRRGVEEELGLTWATDVEAHWELDPSASLLNITYWDKFREEVQRRDLQWTMPYVVALKKGAEINVDHKEVDDV 171          
BLAST of Ggra1634.t1 vs. uniprot
Match: C1E5E2 (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E5E2_MICCC)

HSP 1 Score: 75.1 bits (183), Expect = 4.110e-11
Identity = 47/130 (36.15%), Postives = 66/130 (50.77%), Query Frame = 0
Query:  120 IDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEEARFIIRPRVYAIGQ----PFFFHYVYANGTRE--QRIDKQWTQAYVILPRGDA---LDFRSLDDI 240
            ID  HRKGL H GVW   +D   R++L  R   T+TCP TW+ +GEH+   E++ E   RG+ EE        V A  +        +  Y +  RE  QR D QWT  YV+  +  A   +D + +DD+
Sbjct:   55 IDSAHRKGLPHRGVWAVVIDGKKRVVLIRRGKDTVTCPGTWSIVGEHNDPGESYFEALRRGVEEELGLTWATDVEAHWELDPSASLLNITYWDKFREEVQRRDLQWTMPYVVALKKGAEINVDHKEVDDV 184          
BLAST of Ggra1634.t1 vs. uniprot
Match: B8CAG7 (Nudix hydrolase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAG7_THAPS)

HSP 1 Score: 61.2 bits (147), Expect = 6.360e-7
Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 0
Query:  120 IDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEEARFII 189
            ID  HR G +H G  +F +DS  R L   RSPS +TCP TW+ +GEHS   E  ++   R L EE   ++
Sbjct:  102 IDSAHRNGYLHTGACLFVMDSAGRFLFLKRSPSVVTCPNTWSILGEHSNVGEEAKDVPVRALEEELGLVV 171          
BLAST of Ggra1634.t1 vs. uniprot
Match: A0A7S0FBE8 (Hypothetical protein (Fragment) n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0FBE8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.470e-6
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0
Query:  120 IDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNET----FEETTNRGLAEEAR---FIIRPRVY--AIGQPFFFHYVYANG-TREQRIDKQWT 220
            IDE HR G VH GVW+F +DS  ++LL  R P  +TCP +W  +GEH+   E     +    +R + EE     F     VY  A    +  +Y+   G T + RID+Q T
Sbjct:  114 IDEAHRSGHVHFGVWIFIVDSSQKVLLLKRGPELVTCPNSWGLLGEHASYKENPIGDWHSILHRAIREELGPNIFTQNDFVYREAALSKYPVYYIRDYGPTNDNRIDRQLT 224          
BLAST of Ggra1634.t1 vs. uniprot
Match: A0A7S4IX81 (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IX81_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.990e-6
Identity = 37/115 (32.17%), Postives = 59/115 (51.30%), Query Frame = 0
Query:  120 IDEIHRKGLVHHGVWMFALDSHLRLLLAWRSPSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEE-ARFIIRPRVYAIGQ--PFFFHYVYANGT-REQRIDKQWTQAYVILPRGD 230
            ID  HR+G +H G  M+ +D+   +LL  R P  +TCP TW+ +GEH   +E   +   RG+ EE  R      V  + +  P   +Y+   G+  E R+D+Q T  + +  + D
Sbjct:   81 IDTAHRQGRIHVGSIMYVIDTRGLVLLLRRGPDLVTCPGTWSVVGEHHFRDEEPRDAARRGIIEELGRAFWDGGVEGVSELTPLPLYYIRDYGSANENRVDRQLTYLWEVRLKKD 195          
The following BLAST results are available for this feature:
BLAST of Ggra1634.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IJB42.100e-15163.77Nudix hydrolase domain-containing protein n=1 Tax=... [more]
R7QCM61.260e-12061.85Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S0CHJ13.950e-1627.98Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S0IKS37.240e-1236.15Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
C1E5E24.110e-1136.15Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
B8CAG76.360e-742.86Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S0FBE81.470e-636.94Hypothetical protein (Fragment) n=1 Tax=Rhizosolen... [more]
A0A7S4IX811.990e-632.17Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 100..247
e-value: 2.1E-11
score: 45.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..356
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..80
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 118..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:120032..121102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1634.t1Ggra1634.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 120032..121102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1634.t1 ID=Ggra1634.t1|Name=Ggra1634.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=357bp
MPKVLRLPHEFSQGLLGARSASLRRQGFRSVSGPEAKTARQSTTYIAPDM
TPPTPPPPRISQTALFLVFLVLLGIAGFAIPGGLAPRRETEEILSRRVAE
RLEVFSESDPHQRIDGPFHIDEIHRKGLVHHGVWMFALDSHLRLLLAWRS
PSTMTCPMTWTPIGEHSVTNETFEETTNRGLAEEARFIIRPRVYAIGQPF
FFHYVYANGTREQRIDKQWTQAYVILPRGDALDFRSLDDIDAQATQSYGE
NLRYQGMSIPEVVRHGVQKPDYFCNKVLVKWILRTIPLVIRVLKTKEKRL
FRAHLKEQWGSLVQSGSPVCCRSSEHELDVESVDVSACGIPCEKHTIDVS
DEEAFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase-like_dom_sf