Ggra1631.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1631.t1
Unique NameGgra1631.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length235
Homology
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A2V3IKF6 (Putative SOS response-associated peptidase yoqW n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKF6_9FLOR)

HSP 1 Score: 221 bits (564), Expect = 3.880e-69
Identity = 110/173 (63.58%), Postives = 131/173 (75.72%), Query Frame = 0
Query:   35 RQQMSRRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQS----DTFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWLRHDTPPSRAVGFLNDSTGFSWWRMKSDLSDKFRGKVLKQKGLDAFFGAKGKGGKNADLKVKSPLQKPNKKSLKR 203
            R QM RRCAIP TGF+EWQK+ GPGK SKTPFL+RS   A FED +++YMAG+YR E ++      FVVLTE AA ELEWLHNRQPVFLR E+QV+ WLR D  P+ AV  L D TGFSWWRM  DL+DK+RGKV+KQKG+DAFFG+K K      L+VKS L+K NKK+ K+
Sbjct:   84 RPQMRRRCAIPVTGFYEWQKEAGPGKPSKTPFLIRSIPKAAFEDVSVAYMAGIYRTENENGQATSKFVVLTEKAASELEWLHNRQPVFLRSEKQVEEWLRMDASPTDAVKGLVDGTGFSWWRMAPDLADKYRGKVMKQKGIDAFFGSKAKTKDTQSLRVKSRLKK-NKKATKK 255          
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A5B1R3W6 (DUF159 domain-containing protein n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1R3W6_9AGAM)

HSP 1 Score: 68.2 bits (165), Expect = 1.050e-9
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 0
Query:   40 RRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLY---RRERQSD---TFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWLRHDTPP-SRAVGFLND 144
            RRC +P  G++EW K    GK  + P  +R       +D  +  +AGLY     E QS+   TF ++T  A  ELEWLH+RQPV L D+  +  WL  ++   ++ +G L D
Sbjct:  117 RRCVVPVQGYYEWAKK---GKE-RLPHFIRH------KDGKIMLLAGLYDVAHLEGQSEPLWTFTIVTTAANKELEWLHDRQPVILVDQDAIDAWLNTESQTWTKELGHLLD 218          
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A518LNW7 (Abasic site processing protein n=1 Tax=Phycisphaerae bacterium RAS2 TaxID=2528035 RepID=A0A518LNW7_9BACT)

HSP 1 Score: 65.9 bits (159), Expect = 2.670e-9
Identity = 44/124 (35.48%), Postives = 57/124 (45.97%), Query Frame = 0
Query:   40 RRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQSD-----TFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWLRHDTPPSRAVGFLNDSTGFSWWRMKSDLS 158
            RRC +P +GFFEWQK I  GK  K P  +R        D     +AGL+ R    D     +F ++T  A   ++ LHNR PV L D Q    WL   T   R    L+     S W + S +S
Sbjct:  114 RRCIVPASGFFEWQKLIKGGKEIKQPHYIRR------RDGRPLGLAGLWDRWEGPDGTVIESFTIITTEANETVQALHNRMPVIL-DPQNYDVWLNPATKAERLQSLLSPCP--SDWLVTSPVS 228          
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A1C6E6V2 (Abasic site processing protein n=1 Tax=uncultured Ruminococcus sp. TaxID=165186 RepID=A0A1C6E6V2_9FIRM)

HSP 1 Score: 64.3 bits (155), Expect = 4.490e-9
Identity = 36/108 (33.33%), Postives = 56/108 (51.85%), Query Frame = 0
Query:   38 MSRRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQSDTFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWLR---------HDTPPS 136
            ++RRC IP+TGF+EW K       SK  +L         + +   YMAG Y   +    F++LT +A   +  +H+R PV L ++QQ++ W+          H+TPPS
Sbjct:   91 LNRRCVIPSTGFYEWDK-------SKQKYLFN------IQGSNALYMAGFYNFFKDEPRFIILTTSANSSVSSIHHRMPVVL-EKQQIEDWITDTDKAVSILHNTPPS 184          
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A6P1TL26 (Abasic site processing protein n=1 Tax=Anaerocolumna sedimenticola TaxID=2696063 RepID=A0A6P1TL26_9FIRM)

HSP 1 Score: 62.8 bits (151), Expect = 1.530e-8
Identity = 34/101 (33.66%), Postives = 55/101 (54.46%), Query Frame = 0
Query:   39 SRRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQSDTFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWLRHDTPPSRAV 139
            SRRC IP++GF+EW ++       K  FL       K E++   YMAGLY    +   FV+LT  A   +  +H+R PV L ++++++ W+  +   SR +
Sbjct:   90 SRRCVIPSSGFYEWDRN-------KKKFLF------KREESETLYMAGLYNFFNEECRFVILTTQANQSMNDIHDRMPVVL-EKEEIEQWIMDNNSTSRIL 176          
BLAST of Ggra1631.t1 vs. uniprot
Match: Q5P908 (Abasic site processing protein n=2 Tax=Rhodocyclales TaxID=206389 RepID=Q5P908_AROAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.110e-8
Identity = 37/102 (36.27%), Postives = 50/102 (49.02%), Query Frame = 0
Query:   39 SRRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQSD-----TFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWLRHDTPP 135
            SRRC +P +GF+EWQK +G     K P+ +R   D  F        AGL+ R  + D     TF ++T +A   +  LH R PV +  E     WL  DT P
Sbjct:   95 SRRCLVPASGFYEWQKVVG----GKQPYFIRPANDRLFA------FAGLWERWSRPDGETLDTFAIITTDANDAMGELHERMPVIV-PEDDYDLWLSKDTHP 185          
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A7S7ET08 (Abasic site processing protein n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A7S7ET08_9FIRM)

HSP 1 Score: 62.4 bits (150), Expect = 2.690e-8
Identity = 32/92 (34.78%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   38 MSRRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQSDTFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWL 129
            ++RRC IP+TGF+EW +        K  FL          D+ + YMAG+Y +  + + FV+LT  A   +E +H+R PV L  + +++ WL
Sbjct:   90 VNRRCVIPSTGFYEWDRH-------KRKFLF------SMSDSKMLYMAGIYSKFEEENRFVILTTGANRSMEQVHDRMPVIL-PKNRIKDWL 167          
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A1W1ZJ08 (Abasic site processing protein n=1 Tax=Papillibacter cinnamivorans DSM 12816 TaxID=1122930 RepID=A0A1W1ZJ08_9FIRM)

HSP 1 Score: 61.6 bits (148), Expect = 4.680e-8
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   35 RQQMSRRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQS-DTFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWLRH 131
            R  +SRRC +P+ GFFEW K  G  K  K  F +            + YMAGLY    +    FV+LT  A P +  +H+R PV LR + ++ +W ++
Sbjct:   88 RAFLSRRCVVPSAGFFEWSKKEGAPKKEKYLFTLPG--------EPMLYMAGLYDESPEGLPRFVILTTAANPSVAEIHSRMPVVLR-KSELPSWTQN 176          
BLAST of Ggra1631.t1 vs. uniprot
Match: R1DBV6 (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DBV6_EMIHU)

HSP 1 Score: 62.4 bits (150), Expect = 7.720e-8
Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   40 RRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRR----ERQSDTFVVLTENAAPELEWLHNRQPVFLRDEQQVQTWL 129
            RRCA+P +G++EW  D      +K P+ V    +A+    A  + AGL+      E   ++F ++T +AAP+L WLH+RQPV L D + +  W+
Sbjct:  107 RRCAVPLSGWYEWTDDEFKEVKTKQPYYVGREGEAE----APLWAAGLWDSWEGTEGAVESFTIMTRDAAPDLAWLHDRQPVLL-DAEGLAAWV 195          
BLAST of Ggra1631.t1 vs. uniprot
Match: A0A7X7NUV0 (Abasic site processing protein n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X7NUV0_9CLOT)

HSP 1 Score: 60.8 bits (146), Expect = 7.740e-8
Identity = 31/94 (32.98%), Postives = 52/94 (55.32%), Query Frame = 0
Query:   38 MSRRCAIPTTGFFEWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQSDTF--VVLTENAAPELEWLHNRQPVFLRDEQQVQTWL 129
            + RRC IP +G++EW+     GK  +  F         +E+ AL ++AG YR+E+  D F  V+LT +A+    ++H+R PV +    + + WL
Sbjct:   85 LERRCLIPASGYYEWETI--DGKKQRYAF---------YEENALLFLAGCYRKEKDEDLFRFVILTRDASDHFRYVHDRMPVII-PRSKTENWL 166          
The following BLAST results are available for this feature:
BLAST of Ggra1631.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKF63.880e-6963.58Putative SOS response-associated peptidase yoqW n=... [more]
A0A5B1R3W61.050e-936.61DUF159 domain-containing protein n=1 Tax=Dentipell... [more]
A0A518LNW72.670e-935.48Abasic site processing protein n=1 Tax=Phycisphaer... [more]
A0A1C6E6V24.490e-933.33Abasic site processing protein n=1 Tax=uncultured ... [more]
A0A6P1TL261.530e-833.66Abasic site processing protein n=1 Tax=Anaerocolum... [more]
Q5P9082.110e-836.27Abasic site processing protein n=2 Tax=Rhodocyclal... [more]
A0A7S7ET082.690e-834.78Abasic site processing protein n=1 Tax=Clostridial... [more]
A0A1W1ZJ084.680e-835.71Abasic site processing protein n=1 Tax=Papillibact... [more]
R1DBV67.720e-836.17Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7X7NUV07.740e-832.98Abasic site processing protein n=1 Tax=Clostridiac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003738SOS response associated peptidase (SRAP)PFAMPF02586SRAPcoord: 39..154
e-value: 8.6E-22
score: 77.7
IPR003738SOS response associated peptidase (SRAP)PANTHERPTHR13604DC12-RELATEDcoord: 39..140
IPR036590SOS response associated peptidase-likeGENE3D3.90.1680.10coord: 22..165
e-value: 1.4E-24
score: 88.7
IPR036590SOS response associated peptidase-likeSUPERFAMILY143081BB1717-likecoord: 30..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:109642..110496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1631.t1Ggra1631.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 109642..110496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1631.t1 ID=Ggra1631.t1|Name=Ggra1631.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=235bp
MCGRYQLAVEATALSASHRNAKWVVSNAGQQHKPRQQMSRRCAIPTTGFF
EWQKDIGPGKSSKTPFLVRSFEDAKFEDAALSYMAGLYRRERQSDTFVVL
TENAAPELEWLHNRQPVFLRDEQQVQTWLRHDTPPSRAVGFLNDSTGFSW
WRMKSDLSDKFRGKVLKQKGLDAFFGAKGKGGKNADLKVKSPLQKPNKKS
LKRKELSKESHPSPSKKLLKRDGLEKGLKNDLSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003738SRAP
IPR036590SRAP-like