Ggra1601.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1601.t1
Unique NameGgra1601.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length173
Homology
BLAST of Ggra1601.t1 vs. uniprot
Match: A0A2V3IFS6 (CDK5 regulatory subunit-associated protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS6_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 5.080e-44
Identity = 88/162 (54.32%), Postives = 110/162 (67.90%), Query Frame = 0
Query:    8 EQSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRESQ 169
            EQ LPIDIHY+K  +WLVDR+ I +KWA+HL TARTLTR AL  TP  + T LDIP LTPHQ+L           L T      Q+P P   P DKD+LGR+KSP+LRAW  AVSAFE    YL DAA HL HN N+EA A++++ ARL+R I+  +R+++Q
Sbjct:   10 EQLLPIDIHYSKFLYWLVDRKRISNKWAIHLKTARTLTRTALANTPPEISTLLDIPQLTPHQNLPYFKLKSYFTALIT------QTPPPV--PTDKDILGRYKSPVLRAWADAVSAFETSHLYLADAAQHLVHNTNNEALAIKNNTARLNRDITNYARKQTQ 163          
BLAST of Ggra1601.t1 vs. uniprot
Match: CDK5 regulatory subunit-associated protein 3-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04A5D6 (CDK5 regulatory subunit-associated protein 3-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04A5D6)

HSP 1 Score: 75.5 bits (184), Expect = 9.200e-13
Identity = 48/162 (29.63%), Postives = 80/162 (49.38%), Query Frame = 0
Query:    8 EQSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRESQ 169
            ++SLPIDI+YNKL  WL+DRR   SKW+  + T R     A+   PA      +I  L    ++       + + L  + +              K++ GR+ S  ++ W      +E +   L +A+H L  NVN+E P+L+  IA+  +T  + +R+ES+
Sbjct:    9 QKSLPIDIYYNKLLEWLIDRRHCNSKWSEQVLTIREKINEAIQDMPAV----DEIMQLLSGSYINYFHCVRIVELLEISES------------ASKNIFGRYSSKRMKDWLEIKQLYETNNVGLAEASHMLIRNVNYEIPSLKRQIAKCQQTQRDCTRKESE 154          
BLAST of Ggra1601.t1 vs. uniprot
Match: A0A1J1HHS6 (CLUMA_CG001244, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1HHS6_9DIPT)

HSP 1 Score: 71.2 bits (173), Expect = 2.600e-11
Identity = 43/155 (27.74%), Postives = 66/155 (42.58%), Query Frame = 0
Query:    8 EQSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISE 162
            EQ +PIDIH NKLQ WLV RR +   W  H+   R     AL   PA  Q    +  L    H+       + + L  T  D             K++ G + S  ++ W A +  +E    Y+ +A    + N+++E P +R  I +  +   E
Sbjct:    3 EQDIPIDIHVNKLQDWLVSRRIVDKNWHRHVKDVRNSINEALKDMPANEQ----LVKLLSGDHINYFHCQQIIEILKMTEKD------------SKNIFGSYSSQRMKDWIAVLKLYEKDNLYMAEAGQIFSRNISYEIPNVRKQITQFEKLSDE 141          
BLAST of Ggra1601.t1 vs. uniprot
Match: A0A2C9L4H2 (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L4H2_BIOGL)

HSP 1 Score: 70.9 bits (172), Expect = 3.560e-11
Identity = 48/159 (30.19%), Postives = 73/159 (45.91%), Query Frame = 0
Query:    9 QSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRE 167
            ++LPIDIHYNKL  WLV+RR    +    L+  R     A   T        DI  L  + +L       + + L +T    T            + LG++ SP ++ W   +  +E   TYLV+ A  +  NVN+E PA++  I +  +T  E  R+E
Sbjct:    7 ETLPIDIHYNKLLDWLVNRRHCTQQCQAILTAIRDKINKAKEATTQEAIKKNDIEDLLANPNLNYFQIKQLFELLKSTEIGAT------------NFLGQYTSPAMKMWAEILKLYEKDGTYLVEIAQLIVRNVNYEVPAIKKQINKCQQTQKECMRKE 153          
BLAST of Ggra1601.t1 vs. uniprot
Match: A0A6S7IFS5 (CDK5 regulatory subunit-associated 3-like isoform X1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IFS5_PARCT)

HSP 1 Score: 70.9 bits (172), Expect = 3.580e-11
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 0
Query:    8 EQSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRESQ 169
            +QSLPIDI+YNKL  WL+DRR   SKW       R     A+   PA      +I  L    ++       + + L  + +              +++ GR+ S  ++ W   +  +E     L +A+H L  NVN+E P+L+  IA+  +T  + +R+ES+
Sbjct:    9 QQSLPIDIYYNKLLEWLIDRRHCQSKWQDLALVIREKINEAIQDMPAV----DEIMQLLSGSYINYFHCERIVELLKISES------------ATRNIFGRYSSKRMKDWLEILQLYEADNVGLAEASHMLIRNVNYEIPSLKRQIAKSQQTQRDCTRKESE 154          
BLAST of Ggra1601.t1 vs. uniprot
Match: V4AFS3 (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AFS3_LOTGI)

HSP 1 Score: 70.1 bits (170), Expect = 6.550e-11
Identity = 44/159 (27.67%), Postives = 73/159 (45.91%), Query Frame = 0
Query:    9 QSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRE 167
            + LPIDIHYNKL  WL++RR   +KW       +      +   P       +I  L   Q++       + ++L +T +  T            + LG++ S  ++ W + +  +E    YL + A  L+ NVN+E PAL+  I +  +   ES R+E
Sbjct:    7 EDLPIDIHYNKLLDWLINRRHCNNKWQGEAMKIKEKLNKTVKDIP---DDDAEISDLITDQNMNYFHCLKIVEKLKSTDSGKT------------NFLGQYSSKKMQDWASIIKMYEKDGIYLAECAQILSRNVNYEIPALKKQIGKCHQIQEESKRKE 150          
BLAST of Ggra1601.t1 vs. uniprot
Match: A0A6P4YEA7 (CDK5 regulatory subunit-associated protein 3-like isoform X1 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YEA7_BRABE)

HSP 1 Score: 70.1 bits (170), Expect = 6.610e-11
Identity = 47/159 (29.56%), Postives = 69/159 (43.40%), Query Frame = 0
Query:    9 QSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRE 167
            Q LPIDIHYNKL  WLVDRR    +W       R     A+   P       +I  L    ++       + + L  +  +             KD+ GR+ S  ++ W   V  +E     L + A  LT NVN+E PA++  IA+  +T  E  ++E
Sbjct:    8 QKLPIDIHYNKLLDWLVDRRHCNRQWQAAALVVREKINAAIQDMPEV----QEITQLLQGTYINYFHCIRIVELLKVSEAN------------TKDIFGRYSSQRMKDWQEVVRLYEKDNVNLAEGAQLLTRNVNYEIPAVKRQIAKCKQTQEECVKKE 150          
BLAST of Ggra1601.t1 vs. uniprot
Match: CDK5 regulatory subunit-associated protein 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B08E0 (CDK5 regulatory subunit-associated protein 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B08E0)

HSP 1 Score: 69.3 bits (168), Expect = 1.220e-10
Identity = 47/161 (29.19%), Postives = 75/161 (46.58%), Query Frame = 0
Query:    9 QSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRESQ 169
            QSLPIDI+YNKL  WL+DRR    KW       R     A+   PA      +I  L    ++       + + L  + +              K++ GR+ S  ++ W   +  +E     L +A+H L  NVN+E P+L+  IA+  +T  + +R+ES+
Sbjct:   10 QSLPIDIYYNKLLEWLIDRRHCQPKWQDSALVIREKINEAIQDMPAV----DEIMQLLSGSYINYFHCVRIVELLKVSES------------ATKNIFGRYSSKRMKDWLEILQLYETDNLGLAEASHMLIRNVNYEIPSLKRQIAKDQQTQRDCTRKESE 154          
BLAST of Ggra1601.t1 vs. uniprot
Match: A0A6P8HP18 (CDK5 regulatory subunit-associated protein 3-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HP18_ACTTE)

HSP 1 Score: 69.3 bits (168), Expect = 1.230e-10
Identity = 46/162 (28.40%), Postives = 74/162 (45.68%), Query Frame = 0
Query:    8 EQSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRESQ 169
            E+ LPIDI+YNKL  WL+DRR    KW       R     A+   P       +I  L     +       + + L  + +              K++ GR+ S  ++ W   VS +E +  YL +AAH L  NVN E P+L+  I +  +T  + +++E++
Sbjct:   11 EELLPIDIYYNKLLDWLLDRRHCDLKWQNDALEIREKINAAIQDMPPV----DEITELLSGSFINYFHCLRIVELLKVSES------------ATKNIFGRYSSKRMKDWQEIVSLYEKNNLYLAEAAHLLIRNVNFEVPSLKRQIGKCQQTQRDCTKKENE 156          
BLAST of Ggra1601.t1 vs. uniprot
Match: A0A8B8CZS7 (CDK5 regulatory subunit-associated protein 3-like n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CZS7_CRAVI)

HSP 1 Score: 68.9 bits (167), Expect = 1.650e-10
Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 0
Query:    6 AAEQSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALFQTPAALQTALDIPSLTPHQHLXXXXXXXVCQQLTTTPNDPTQSPLPSGPPLDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALRSSIARLSRTISESSRRE 167
            A+ ++LPIDIHYNKLQ WL++RR    +W       R     AL   P      L++   T   +         C+++     +  +S         K++ GR+ S  ++ W   +  +E    YL + A  L  NVN+E PAL+  IA+  +   ES R++
Sbjct:    2 ASLENLPIDIHYNKLQDWLINRRHCIQEWPARAVAIREKINEALVDMPKH-PKMLELLEGTYINYFH-------CKKIIELLKEDEESG-------KKNMFGRYSSQRMKDWSEIIKMYEKDGIYLGETAQMLARNVNYEVPALKRQIAKCQQIKKESERKQ 148          
The following BLAST results are available for this feature:
BLAST of Ggra1601.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFS65.080e-4454.32CDK5 regulatory subunit-associated protein 3 n=1 T... [more]
CDK5 regulatory subunit-associated protein 3-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04A5D69.200e-1329.63CDK5 regulatory subunit-associated protein 3-like ... [more]
A0A1J1HHS62.600e-1127.74CLUMA_CG001244, isoform A n=1 Tax=Clunio marinus T... [more]
A0A2C9L4H23.560e-1130.19Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A6S7IFS53.580e-1129.01CDK5 regulatory subunit-associated 3-like isoform ... [more]
V4AFS36.550e-1127.67Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A6P4YEA76.610e-1129.56CDK5 regulatory subunit-associated protein 3-like ... [more]
CDK5 regulatory subunit-associated protein 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B08E01.220e-1029.19CDK5 regulatory subunit-associated protein 3-like ... [more]
A0A6P8HP181.230e-1028.40CDK5 regulatory subunit-associated protein 3-like ... [more]
A0A8B8CZS71.650e-1029.01CDK5 regulatory subunit-associated protein 3-like ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008491CDK5 regulatory subunit-associated protein 3PFAMPF05600DUF773coord: 9..170
e-value: 6.6E-28
score: 97.7
IPR008491CDK5 regulatory subunit-associated protein 3PANTHERPTHR14894CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3coord: 6..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..102
NoneNo IPR availablePANTHERPTHR14894:SF0CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3coord: 6..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000133_piloncontigtig00000133_pilon:4370..4887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1601.t1Ggra1601.t1Gracilaria gracilis GNS1m malemRNAtig00000133_pilon 4370..4887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1601.t1 ID=Ggra1601.t1|Name=Ggra1601.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=173bp
MSRIAAAEQSLPIDIHYNKLQHWLVDRRAIPSKWALHLSTARTLTRVALF
QTPAALQTALDIPSLTPHQHLPSLTVHQVCQQLTTTPNDPTQSPLPSGPP
LDKDLLGRFKSPLLRAWYAAVSAFEHHATYLVDAAHHLTHNVNHEAPALR
SSIARLSRTISESSRRESQLRQX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008491CDK5RAP3