Ggra1599.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1599.t1
Unique NameGgra1599.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length264
Homology
BLAST of Ggra1599.t1 vs. uniprot
Match: A0A2I2KJU4 (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Frankia canadensis TaxID=1836972 RepID=A0A2I2KJU4_9ACTN)

HSP 1 Score: 66.2 bits (160), Expect = 6.120e-9
Identity = 72/238 (30.25%), Postives = 102/238 (42.86%), Query Frame = 0
Query:   29 SALLNAACRAVETHSPRALVEDPLADALTTPFIRR-RVEQGQPQYVQPVIHA----------RY---RRDFVAKHLCSPFDKRV-QLVSLGTGFDAAPANSGGGDGAALVEVFELDVLPFVAQKRRLLSEARFEQRGVHAKSLAVDHVRERPDWPIKLLANGFDTCVHTVWLLDYTSPLLSDVQLDKLLSDVRALSRPGSMLLLQVCRRHNAQLLTDARRVFR-RLGFVVMDVHHVGD 250
            +AL  A+ RA+ETH P A+++DP A+     F+R  R+ Q  P   + +             RY   R  F   +L +  D  + Q V L  G D      G  +G+A+ EV +  VL F       LS  R  Q     +   V  V  R +W   L   GF+    T WL++   P L      +LL+ V ALS PGS + ++  RR    L  D     R R G  + D+ H  D
Sbjct:   50 TALGAASARAIETHRPDAMIDDPYAEE----FVRAARLPQPMPTTPEELAAMSPPGSWMPGWRYMGVRTRFFDDYLATALDAGLRQTVILAAGLDTRAFRLGWHEGSAVFEVDQPRVLSFK------LSVLRRRQATPACRHRVVP-VDLREEWAGPLRTAGFEPVAATAWLIEGLLPYLDADAERRLLTTVDALSAPGSQVAIEDARRIGQALSDDEYAASRERYGVDLRDLVHEDD 276          
BLAST of Ggra1599.t1 vs. uniprot
Match: A0A0G4HTW3 (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HTW3_9ALVE)

HSP 1 Score: 61.6 bits (148), Expect = 1.650e-7
Identity = 78/247 (31.58%), Postives = 103/247 (41.70%), Query Frame = 0
Query:   34 AACRAVETHSPRALVEDPLADALTTPFIRRRVEQG------QPQYVQPVIHARYRRDFVAKHLCSPFDKRVQLVSLGTGFDA-------APANSGGGDGAALVE--VFELDVLPFVAQKRRLLSEARFEQR---GVHAKSLAVDHVRERPDWPIKLLANGFDTCVHTVWLLDYTSPLLSDVQLDKLLSDVRALSRPGSMLLLQVCRRH---------NAQLLT---DARRVFRRLGF--VVMDVHHV 248
            AA RA E+  P+AL +D LA  L      RR   G      + +Y   V+ + Y R    K  C       QLV LG GFDA       +P  SG      L +  VFE+D       K  +L+    + R    V  + +      ++  W  KLL NGFD  V TVWLL+     LSD  +D L  DV  LS   S+L                  A  ++   D  R++R+ GF  VV D  HV
Sbjct:    3 AATRAEESQHPQALFQDLLAWHLAG-VEGRRAPMGSWILVPRTRYGDNVLVSAYSRQ---KTPCR------QLVLLGAGFDARAFRTFSSPEQSGQNGTLQLSDLTVFEVDQPTTFDVKEAILNYPNVKSRCPLTVKDRRVVPVDFTQQESWADKLLQNGFDPSVPTVWLLEGLLYYLSDSTVDDLARDVGRLSAANSVLFFDSVTHDYRYAGVAPGGAPFISGNDDYGRLWRKYGFEVVVHDFEHV 239          
BLAST of Ggra1599.t1 vs. uniprot
Match: SAM-dependent methyltransferase n=1 Tax=Streptacidiphilus griseoplanus TaxID=66896 RepID=UPI0006E1E51B (SAM-dependent methyltransferase n=1 Tax=Streptacidiphilus griseoplanus TaxID=66896 RepID=UPI0006E1E51B)

HSP 1 Score: 61.6 bits (148), Expect = 1.720e-7
Identity = 64/195 (32.82%), Postives = 88/195 (45.13%), Query Frame = 0
Query:   29 SALLNAACRAVETHSPRALVEDPLADALTT------PFIRRRVEQGQPQYVQPVIHARYRRD--FVAKHLCSPFDKRVQLVSLGTGFDAAPANSGGGDGAALVEVFELDVLPFVAQKRRLLSEARFEQRGVHAKSLAVDHVRERPDWPIKLLANGFDTCVHTVWLLDYTSPLLSDVQLDKLLSDVRALSRPGSML 215
            +AL  AA RA E+     L EDPLA A         P  R     G P   + + H    R   F  + L +  D  +Q+V    G D         DG AL E+    +L F   K R+L+E   + R +  +++    +RE  DW  +L+A GFD    TVWL +     LS  +   LL++V ALS PGS L
Sbjct:   14 TALGVAAARARESLRSDRLFEDPLAAAFLAAAGWPGPEQRPAAPTGDPALGESMFHHLVIRTRFFDDRLLAAAADGCLQVVLTAAGLDTRAFRLPWPDGTALYEIDFPGMLDF---KERVLAEQ--QARPLCRRTVLPADLRE--DWGGRLVAAGFDPGARTVWLAEGLLIYLSPSETAGLLTEVGALSAPGSRL 201          
BLAST of Ggra1599.t1 vs. uniprot
Match: SAM-dependent methyltransferase n=1 Tax=Actinomycetospora endophytica TaxID=2291215 RepID=UPI001E60CC7A (SAM-dependent methyltransferase n=1 Tax=Actinomycetospora endophytica TaxID=2291215 RepID=UPI001E60CC7A)

HSP 1 Score: 60.8 bits (146), Expect = 3.650e-7
Identity = 66/211 (31.28%), Postives = 87/211 (41.23%), Query Frame = 0
Query:   29 SALLNAACRAVETHSPRALVEDPLAD-----ALTTPFIRRRVEQGQPQ--------------YVQPVIHARYRRDFVAKHLCSPFDKRV-QLVSLGTGFDAAPANSGGGDGAALVEVFELDVLPFVAQKRRLLSEARFEQRGVHAKSLAVD-HVRERPDWPIKLLANGFDTCVHTVWLLDYTSPLLSDVQLDKLLSDVRALSRPGSMLLLQ 218
            +AL+ AA RAVETH P  LVEDP A+     A T   +  R +Q  P               +     +   R  F  + L         Q+V L  G DA        D  A   VFE+D    +A K R L+E      GVH +   V   V  R DWP  L   GFD    +VWL +   P L       LL  +  L+ PGS ++++
Sbjct:   17 TALMVAAGRAVETHRPEPLVEDPYAEMFIARADTPQPVPTRADQPWPDPERVGDETTPVDEFWSMMTTYQGVRSRFFDRALLEATAAGADQVVLLAAGLDARAYRL---DWPAGTTVFEVDQEQVLAFKDRTLAE-----EGVHERCRRVSVPVDLRDDWPAALRDAGFDQLRPSVWLAEGLLPFLPADAESALLERMSGLAAPGSTVVVE 219          
The following BLAST results are available for this feature:
BLAST of Ggra1599.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2I2KJU46.120e-930.25S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A0G4HTW31.650e-731.58Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
SAM-dependent methyltransferase n=1 Tax=Streptacidiphilus griseoplanus TaxID=66896 RepID=UPI0006E1E51B1.720e-732.82SAM-dependent methyltransferase n=1 Tax=Streptacid... [more]
SAM-dependent methyltransferase n=1 Tax=Actinomycetospora endophytica TaxID=2291215 RepID=UPI001E60CC7A3.650e-731.28SAM-dependent methyltransferase n=1 Tax=Actinomyce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007213Methyltransferase Ppm1/Ppm2/TcmpPFAMPF04072LCMcoord: 30..204
e-value: 9.7E-14
score: 51.7
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 22..260
e-value: 2.2E-28
score: 101.4
NoneNo IPR availablePANTHERPTHR43619S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATEDcoord: 21..224
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 29..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:759478..760390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1599.t1Ggra1599.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 759478..760390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1599.t1 ID=Ggra1599.t1|Name=Ggra1599.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=264bp
MFSAMWRAPARDAPSPPCCCERADTYLNSALLNAACRAVETHSPRALVED
PLADALTTPFIRRRVEQGQPQYVQPVIHARYRRDFVAKHLCSPFDKRVQL
VSLGTGFDAAPANSGGGDGAALVEVFELDVLPFVAQKRRLLSEARFEQRG
VHAKSLAVDHVRERPDWPIKLLANGFDTCVHTVWLLDYTSPLLSDVQLDK
LLSDVRALSRPGSMLLLQVCRRHNAQLLTDARRVFRRLGFVVMDVHHVGD
AHASYDIYLRLHL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007213Ppm1/Ppm2/Tcmp
IPR029063SAM-dependent_MTases