Ggra1591.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1591.t1
Unique NameGgra1591.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length677
Homology
BLAST of Ggra1591.t1 vs. uniprot
Match: A0A2V3IE03 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE03_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 2.270e-41
Identity = 80/171 (46.78%), Postives = 110/171 (64.33%), Query Frame = 0
Query:  468 WPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKAGLGVFATTAFKENDVICHFYGTLVYHNLSNRDETHTTYGKGMLGVTAERFRKYCIETELEGDVFLILTG-----NSGGDRKKPVVWVVPAPFCAAGYINDARYVEGDPEKDGLVPPR-GWRDNNASIERTKR 632
            WP + +G ++  + +SLLA +A    + V KSTI+H KAG+GVFAT      +V+C+FYGTLVYH+LSNR E H TYG+G++GV  +RFRKY ++ E+ G  F  L       N  G +  P++WVVPAPFC AGYIN  +YVEGD + D +V      R  N  ++RT +
Sbjct:  122 WPRELQGRMNLENMKSLLAMEAVQYGLRVGKSTIRHEKAGVGVFATRRIAAGEVVCYFYGTLVYHDLSNRKEVHKTYGEGVMGVKKDRFRKYAVKIEVYGQQFQSLPHRKQLTNWHGKQANPILWVVPAPFCIAGYINYPKYVEGDKQLDAMVDGLVKKRKGNVRMKRTPK 292          
BLAST of Ggra1591.t1 vs. uniprot
Match: R7QPQ1 (Adenine specific DNA methyltransferase n=6 Tax=Chondrus crispus TaxID=2769 RepID=R7QPQ1_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 3.820e-27
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 0
Query:  468 WPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKAGLGVFATTAFKENDVICHFYGTLVYHNLSNRDETHTTYGKGMLGVTAERFRKYCIETELEGDVFLILTGNSGGDRKKPVVWVVPAPFCAAGYINDARYVEGDPEKDGLVPPR--GWRDNNASIERTKRGTTSLRNLEAPQLLSIIAARDIEEGEEIFMDYGR 666
            W  + +G   + D  +L A +A    V +A S+++HPKAGLG+FAT  F  +D IC +YGTLVYH+L      +  YG+G++GV  ERF  Y +    +G VF  +T    G +    + +VP+ FC   +IND RY   D +    V  R    R+ N + + +    TS   L+   L+ + A R I  GEE+F DY R
Sbjct:  798 WKRELQGRFHQTDVHALRAIEAVQFGVALAPSSVRHPKAGLGLFATRTFDVDDDICLYYGTLVYHDLIRSKSKNKPYGEGLMGVDRERFMTYAMLVPTQGRVFQNVTDLIDGQKA---ISIVPSRFCVGAFINDHRYHPDDKDHKDFVDGRLANPRNVNVAYDLSVSKVTSTSALQKHTLMRVKALRLINPGEELFADYIR 995          
BLAST of Ggra1591.t1 vs. uniprot
Match: A0A2V3IWE9 (DNA adenine methyltransferase YhdJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWE9_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 8.940e-23
Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = 0
Query:  449 NQKDLVVTHESLGMETVGD-WPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKAGLGVFATTAFKENDVICHFYGTLVYHNLSNRDETHTTYGKGMLGVTAERFRKYCI 561
            +Q D   T   LG +   D W  + +G ++  + +SLLA +A    + V KSTI+H KAG+GVFAT      +V+C+FYGTLVYH+LSN+ E H TYG+G++GVT +RFRKY +
Sbjct:  131 SQWDEAGTPWKLGRKKAMDGWLRELQGRMNLENMKSLLAMEAVQYGLGVGKSTIRHEKAGVGVFATRRIAAGEVVCYFYGTLVYHDLSNQKEVHKTYGEGVMGVTKDRFRKYAV 244          
The following BLAST results are available for this feature:
BLAST of Ggra1591.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IE032.270e-4146.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPQ13.820e-2736.32Adenine specific DNA methyltransferase n=6 Tax=Cho... [more]
A0A2V3IWE98.940e-2347.37DNA adenine methyltransferase YhdJ n=1 Tax=Gracila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10SET domaincoord: 618..670
e-value: 2.3E-5
score: 26.6
NoneNo IPR availableGENE3D2.170.270.10SET domaincoord: 476..570
e-value: 8.6E-7
score: 31.0
NoneNo IPR availableCDDcd08161SETcoord: 648..665
e-value: 2.04857E-4
score: 38.386
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 502..669
IPR001214SET domainPROSITEPS50280SETcoord: 492..665
score: 11.365962

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:688200..691238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1591.t1Ggra1591.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 688200..691238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1591.t1 ID=Ggra1591.t1|Name=Ggra1591.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MAPTDRDTMQRLYRSADIFFALRDSFAEEGSHKGRPREAGFRTIAQYAAE
NHERLDLARQFLETKVQSPNLGNFEIEDLKETVIRKKPLEQMYMVCRILD
VTDDSSDTRTRDLMKMISRSPHALPIRCYLTPFLRSFTAVVKSQSDMFFR
TFRSPTRFGILLYLSNLLYIMREKESRRQNKKRRLTTGAAPGIFLEGFPN
FSKETCQRTGFAVERTIYAWDIFARGLGFDDVESMIYPYIMFDTNNMMFK
VLDNRSIGYCPLSHHTRVEENVEPTMKRGGVVAAFSDDVDSNLRILAKEF
LDDVHGMCTHERLYTLQGQNKHERWVTLEQLTPDMDRKARDPSHTRDEQF
PERFDRLAEDLWKPILDATGCARAEASNADVEMVQAPVNLVSSDEDDFEP
APVPIRSKFDTLDRTVEPPKVAKGRFLPNAMKQLNELMRTSYSVLYNCNQ
KDLVVTHESLGMETVGDWPEKYRGALDRVDSRSLLAQDASCSSVTVAKST
IKHPKAGLGVFATTAFKENDVICHFYGTLVYHNLSNRDETHTTYGKGMLG
VTAERFRKYCIETELEGDVFLILTGNSGGDRKKPVVWVVPAPFCAAGYIN
DARYVEGDPEKDGLVPPRGWRDNNASIERTKRGTTSLRNLEAPQLLSIIA
ARDIEEGEEIFMDYGRPYDWAKQLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom