Ggra1566.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1566.t1 vs. uniprot
Match: A0A2V3J0Q8 (U2 small nuclear ribonucleoprotein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Q8_9FLOR) HSP 1 Score: 269 bits (687), Expect = 1.030e-87 Identity = 151/253 (59.68%), Postives = 166/253 (65.61%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKA-----GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQEPP--------PVPVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
MDAPAPCRTLYVRNLPDKLKK RLRRLLHAACSPYG+VVHIVAEKS+ LRGQAFITF TQ SATAALRKLHA++FMG ISVSYAR+LSDKA G + PP P+ PAVPNRILFVQN+P +++ KK + DVLSDLFARFAGF+EVRSVPG TIAFVEF +E EAAVALSGL HPLG PPQPI +SFANK
Sbjct: 1 MDAPAPCRTLYVRNLPDKLKKHRLRRLLHAACSPYGRVVHIVAEKSIPLRGQAFITFHTQASATAALRKLHASEFMGNHISVSYARALSDKAASEKLGGDSTLSRNKRAAKRRADALAVKRDHIAAAEQQQQQHALASTAVPSSTAMPNAPPIVAAIVPHPIAAPAVPNRILFVQNIPTALDKHAKKELVSDVLSDLFARFAGFVEVRSVPGKHTIAFVEFSSEQEAAVALSGLNAHPLGDPPQPIHVSFANK 253
BLAST of Ggra1566.t1 vs. uniprot
Match: R7QCR0 (\Probable U2 small nuclear ribonucleoprotein B (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCR0_CHOCR) HSP 1 Score: 137 bits (344), Expect = 8.220e-38 Identity = 67/94 (71.28%), Postives = 81/94 (86.17%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKAGS 94
MDA PCRTLYVRNLPDKL K +LRRLLHAA +P+G VV IVAEK+L LRGQAFITF+ Q+SAT ALRK HAT+F+G+ +SV+YAR++SD+A S
Sbjct: 1 MDANPPCRTLYVRNLPDKLAKAKLRRLLHAAFTPHGHVVWIVAEKTLKLRGQAFITFEQQSSATQALRKTHATEFLGRVLSVTYARAVSDRAAS 94
BLAST of Ggra1566.t1 vs. uniprot
Match: A0A2K1KBA5 (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KBA5_PHYPA) HSP 1 Score: 120 bits (302), Expect = 6.430e-30 Identity = 117/244 (47.95%), Postives = 149/244 (61.07%), Query Frame = 0
Query: 2 DAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSD---KAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQEPPPV--PVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
D P P +T+Y+ NL +K+KK L++ L+A S +G+++ IVA K+L LRGQA++ F T+AT+ALR++ F K + + YA++ SD KA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Q P PV PA PN ILFVQNLP E LA + LF +F GF EVR + IAFVEFG+E +A VAL GL + TP Q + +S+A K
Sbjct: 5 DTP-PNQTIYINNLNEKVKKEELKKSLYAVFSQFGKIMDIVACKTLKLRGQAWVVFDDVTAATSALRQMQGFPFYDKPMRIQYAKTTSDAISKANGTYVPKEKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGVPPHASQQYQPPRPVVPEAPAPPNNILFVQNLP----HEATSLA----IQVLFQQFPGFKEVRMIEAKPGIAFVEFGDELQATVALQGLHNFKI-TPNQAMQVSYAKK 238
BLAST of Ggra1566.t1 vs. uniprot
Match: C1MW81 (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MW81_MICPC) HSP 1 Score: 117 bits (294), Expect = 6.960e-29 Identity = 94/239 (39.33%), Postives = 124/239 (51.88%), Query Frame = 0
Query: 2 DAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQEPPPVPVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
D P PC T+YV NL +K+KK L++ LHA S +G+++ +VA K+ LRGQA++ FQ SATAA+R + F K + ++YA++ SD XXXXXXXXXXX ++ P P PN ILFVQ LP + +LS LF +F GF EVR V IAFVEF ET+A+VAL GLQ + P +TLS+A K
Sbjct: 3 DIP-PCPTIYVNNLNEKIKKEELKKSLHAVFSQFGKIIDVVAVKTYKLRGQAWVVFQDVASATAAMRAVQGFPFFDKPMKLAYAKAKSDATAKLDGTYDPSARDPEARAKRKAASQAEEXXXXXXXXXXXARGGGSAP---IRTDPSAP----PNEILFVQGLP--------EATTAAMLSMLFQQFPGFKEVRMVEAKPGIAFVEFTAETQASVALQGLQGFKIN-PTHSMTLSYAKK 224
BLAST of Ggra1566.t1 vs. uniprot
Match: A0A7S0HCA2 (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HCA2_9EUKA) HSP 1 Score: 117 bits (292), Expect = 4.130e-28 Identity = 92/251 (36.65%), Postives = 130/251 (51.79%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKA----GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVV-------QEPPPVPVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
M PAP T+YV N+ +K+ K L++ L+AA S +G ++ ++A K+ +RGQAF+ F+ T+AT A+R++ F K + +SYA S SD GS XXXXXXXXXXX V + PP P A+PN+ILFV+NLP V +LS LF +F GF EVR VPG IAFVEF N+ ++ A+ GLQ + TP + +++A +
Sbjct: 30 MAEPAPRETIYVNNINEKVSKDELKKSLYAAFSQFGPILDVIALKTFKMRGQAFVVFRDITAATQAVRQMQGFPFYEKPMMISYANSKSDAVAKLDGSYEAKDKAERASKRKAXXXXXXXXXXXALAKPKEVAEAGVATPAVGEAVAAAPVERKKAPPSAPTVALPNQILFVENLPDQVNEM--------MLSMLFQQFPGFKEVRLVPGKAGIAFVEFENDVQSGTAMQGLQNFKI-TPTNLMKITYAKR 271
BLAST of Ggra1566.t1 vs. uniprot
Match: A0A1Y1IC41 (Putative RNA recognition motif containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IC41_KLENI) HSP 1 Score: 115 bits (287), Expect = 1.370e-27 Identity = 92/248 (37.10%), Postives = 131/248 (52.82%), Query Frame = 0
Query: 5 APCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQE---------PPPVPVP---AVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
AP +T+YV NL +K+KK +++ L+A S +G+++ IV K+L LRGQA++ F T+AT ALR++ F K + ++YA++ SD XXXXXXXXXXX PPP+ VP A PN +LFV+NLP E KL +LS LF +F GF EVR + IAFVEF +E ++ VA+SGLQ + + TP P+ +++A K
Sbjct: 11 APNQTIYVSNLNEKIKKEEMKKSLYAVFSQFGKILDIVNLKTLKLRGQAWVVFDDITAATNALRQMQGFPFYDKPMKIAYAKTKSDAVSKADGTFVPREKRKAIEEREKEKARKRAAAAGPVPAALXXXXXXXXXXXXXXXXXPAYGYGMPPPMAVPEAPAPPNNLLFVENLP----LEASKL----MLSTLFNQFPGFKEVRMIESKPGIAFVEFSDENQSTVAMSGLQGYRI-TPTNPMLITYAKK 249
BLAST of Ggra1566.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein A-like n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C1A69 (LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein A-like n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C1A69) HSP 1 Score: 112 bits (281), Expect = 6.890e-27 Identity = 103/244 (42.21%), Postives = 137/244 (56.15%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKA----GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQEPPPVPVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
MD P P +T+Y+ NL +K+KK L++ L+A S +G ++ IVA K+L +RGQAF+ F SAT ALR + F K + + YA+S SD G+ XXXXXXXXXXXXXXXXXXXX +Q+P VPA+PN+ILF+ LP E ++ +L+ LF +F GF EVR VPG IAFVEF NE +A A LQ + TP + ++FA K
Sbjct: 1 MDNP-PNQTIYINNLNEKVKKDELKKSLYAIFSQFGNILDIVAMKTLKMRGQAFVVFADIASATNALRSMQGFPFYDKPMRIQYAKSKSDAIAKLQGTYTPREKRXXXXXXXXXXXXXXXXXXXXQPNRAAPQVAMQPNMMPHMVPMQQPD---VPALPNKILFLTQLP----XETTQM----MLAMLFNQFPGFREVRLVPGKSDIAFVEFDNEIQAGTAKDALQGFKI-TPTNAMKITFAKK 231
BLAST of Ggra1566.t1 vs. uniprot
Match: A0A2V0P6S2 (U2 small nuclear ribonucleoprotein B n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P6S2_9CHLO) HSP 1 Score: 112 bits (280), Expect = 7.420e-27 Identity = 99/238 (41.60%), Postives = 127/238 (53.36%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQEPPPVPVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFA 238
MD P P +T+YV NL +KL K L++ LHA S +G++V +VA K+ LRGQA++ F +AT+ALR + F K I + YAR SD XXXXXXXXXXXXXXXXX A PN+ILFVQNLP E A++ +L F +F GF EVR + G IAFVEF NE ++ VA+SGLQ + TP + +SFA
Sbjct: 1 MDIP-PNQTIYVHNLYEKLNKQELKKCLHAMFSQFGRIVDVVALKTYRLRGQAWVVFADVGAATSALRSMQGFPFFEKPIRIEYARGKSDAVAKLEGTYKPDKDRGRKNAAARESLKAKRTXXXXXXXXXXXXXXXXXPDGA----------APPNKILFVQNLP-----EATTDAMLGML---FQQFPGFREVRMIEGRPGIAFVEFENEMQSGVAMSGLQGFKV-TPTNAMAISFA 218
BLAST of Ggra1566.t1 vs. uniprot
Match: K4GIR2 (U2 small nuclear ribonucleoprotein B-like protein n=8 Tax=Chondrichthyes TaxID=7777 RepID=K4GIR2_CALMI) HSP 1 Score: 111 bits (278), Expect = 1.690e-26 Identity = 91/235 (38.72%), Postives = 123/235 (52.34%), Query Frame = 0
Query: 6 PCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQEPPPVPVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
P T+Y+ N+ DK+KK L+R L++ S +GQ+V IVA K++ +RGQAF+ F+ SAT+ LR+L F GK + + YA++ SD XXXXXXXXXXXX Q+ P P PN ILF+ NLP E ++ +LS LF +F GF EVR VPG IAFVEF NE +A A LQ + TP + +++A K
Sbjct: 5 PNHTIYINNINDKIKKDELKRALYSLFSQFGQIVDIVALKTMKMRGQAFVIFKELCSATSGLRQLQGFPFYGKPMRIQYAKTDSDVTSKMRGTFADKEKXXXXXXXXXXXXSAANKKMNLGAAQPTTANSNQTTSSANQQVPDNP----PNYILFLTNLP----EETNEM----MLSMLFNQFPGFKEVRLVPGRHDIAFVEFENEGQAGAARDALQGFRI-TPSHAMKITYAKK 226
BLAST of Ggra1566.t1 vs. uniprot
Match: A0A5B8MSV7 (U1 small nuclear ribonucleoprotein A n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSV7_9CHLO) HSP 1 Score: 111 bits (277), Expect = 2.680e-26 Identity = 81/246 (32.93%), Postives = 114/246 (46.34%), Query Frame = 0
Query: 1 MDAPAPCRTLYVRNLPDKLKKLRLRRLLHAACSPYGQVVHIVAEKSLALRGQAFITFQTQTSATAALRKLHATQFMGKQISVSYARSLSDKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVV------QEPPPVPVPAVPNRILFVQNLPPVVEREGKKLALVDVLSDLFARFAGFLEVRSVPGNDTIAFVEFGNETEAAVALSGLQQHPLGTPPQPITLSFANK 240
+D P +T+YV NL +KL K LR+ LHA S +G+++ IV K+ LRGQA++ F+ TSAT ALR + F K + ++YA++ SD + +EPP + ILFVQNLPP + +++ LF +F GF EVR V IAFVEFGNE E++VALSGLQ + T + +S+A K
Sbjct: 3 IDGSLPNQTVYVSNLYEKLSKDELRKSLHAVFSQFGKILDIVCMKNYRLRGQAWVVFEDITSATNALRLMQGFPFYDKPMKIAYAKTKSDAVAKLDGTYVSRDKAETARVNKEKREALQKRAAMRKGGSRPDQQAPFAAGAALAGTLDSEEPP--------HNILFVQNLPPATSQA--------MIAMLFEQFPGFKEVRMVETRPGIAFVEFGNEMESSVALSGLQGFQI-TKENSMRVSYAKK 231 The following BLAST results are available for this feature:
BLAST of Ggra1566.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1566.t1 ID=Ggra1566.t1|Name=Ggra1566.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=241bpback to top |