Ggra1564.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1564.t1
Unique NameGgra1564.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length805
Homology
BLAST of Ggra1564.t1 vs. uniprot
Match: A0A2V3IIC8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIC8_9FLOR)

HSP 1 Score: 204 bits (519), Expect = 1.480e-54
Identity = 124/355 (34.93%), Postives = 180/355 (50.70%), Query Frame = 0
Query:  360 MHGFHNVEFFSQPNKGRTSWYVARPEWWNAYEVPMSLSVPTPPVLAYFGSYITRNHDRYYLIWSIALAEWAVLVAILALQAARDGIDWDCRSREAEIYRDGVQPPGRMFFIPPRVIRNIRLFGIGTIVAGTDYSIEQLESLLTQVESFPWGAKQGWEVFDPVSWKVVSRAEQRYPGAPTDQGPPGSPEPFPTVVESPAAXXXXXXXXXXXXXXXXXPAHTGATPLLPSTTRVDGPPRAILGGVMAAAAAPVPS--QVDSQAISGLMARVRQACVVNFQRAGPTSVVEALTLLESILPRHAQYMRSFSQIGEFRNRFQVELYQMATNQVAGLATAM-GPTPTNPLEDPLFGASLNP 711
            MHG+H +E+F Q  + R  WYV +P WWN YE P  + VPTP VLAYFG         Y+ IWS+A+ +WAVLV++LAL+A R  I W+    E   Y    QP GR++ +P ++I+ IR  GI  IVA T Y+   L++ L   E+  WG  Q  EV+D    +V S  +Q  PG        G    +  VVE+P                      +G  P +P +     P R     +    + P+     V +  ++  + R++Q CV   +R G  S+ EALT+LE+++ RHA Y+ + +Q+G FR  FQ ELY+  T+ V  L+  + G + T    DPL G    P
Sbjct:    1 MHGYHLIEYFPQSTEARRQWYVQQPRWWNEYEAPQWVLVPTPLVLAYFGRLTREGSPCYHTIWSVAMCKWAVLVSMLALEAGRHDITWNLPCPETAFYSHEFQPVGRLYRLPMQLIQLIRCLGISDIVARTGYTENHLDNYLRAAENHRWGPDQVCEVWDHDRQRVSSPGDQALPG----DDHMGEEAQYGCVVETPEDLTYTASMAPT----------SGQHPPVPPSNTTPVPRRGRFQPI-GLVSNPIGGGEHVTAPEVTDTLMRIQQLCVTRLKRPGLRSIQEALTILEALITRHATYVETLNQVGGFRTNFQAELYRAVTHHVGELSDLLRGASSTG---DPLMGTLEGP 337          
BLAST of Ggra1564.t1 vs. uniprot
Match: A0A2V3IV02 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV02_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 1.400e-23
Identity = 91/293 (31.06%), Postives = 135/293 (46.08%), Query Frame = 0
Query:  285 DLPYVRIEPELHYYRR---LVVKICQYDSLPQQYLPASP-HLVCFDRPYNTIHWANRRRWGVDAATEARIRTRSSFNRVMHGFHNVEFFSQPNKGRTSWYVARPEWWNAYEVPMSLSVPTPPVLAYFGSYITRNHDRYYLIWSIALAEWAVLVAILALQAARDGIDWDCRSREAEI--YR------DGVQPPG--RMFFIPPRVIRNIRLFGIGTIVAGTDYSIEQLESLLTQVESFPWGAKQGWEVFDPVSWKVVSRAEQRYPGAPTDQ---------GPPGSPEPFPTVVE 554
            D+P++R   E     R   L+ ++      P     ++P  LV F RPY+ ++W NRRRWG + ATEAR+R  S+ +  M  + N+EFF      R   YV  P+ W  ++V   LSV  PPVLAY+   + R       +  IA+AEWAV   +  LQAA +G+    R+ +  +  +R      +  +PPG  R+F +P  ++  +   G+  ++ GT Y+ E     L       W    G+  FDP      +      P  PTD          GP   P  FP V E
Sbjct:  199 DMPFLRCPEEYQCQARMRDLIGRMATDVDFPSA--DSNPLQLVMFSRPYDRMYWLNRRRWGDNIATEARLR--SNRDGYMFCWQNIEFFDVSPADREKLYVRAPQNWGEFDVTRDLSVIIPPVLAYYSGEVLRESALSERVMRIAIAEWAVCALMAFLQAASEGVRVFTRTEDPRVNFFRGFPRQPNTREPPGLGRLFPLPYGLVSLVMQMGLENVLRGTIYATETARRWLYLSVMTDWVVTPGYLWFDP-----RTETFPEMPRIPTDPFPLTHRLQLGPVRPPWDFPNVAE 482          
The following BLAST results are available for this feature:
BLAST of Ggra1564.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIC81.480e-5434.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IV021.400e-2331.06Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 775..804
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..804
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..418
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 439..804
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 419..438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:470510..472924 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1564.t1Ggra1564.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 470510..472924 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1564.t1 ID=Ggra1564.t1|Name=Ggra1564.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=805bp
MVTPDPYLNHMGSPGTSVRARTRSGTRRLSVPHVGQSDAVTSRDGAPSAT
NADALMVEPAWGPERVEVLSISSSDSPIVDKKPIRFTPAVECSPSQPLPR
GTHHTMSGAGPSRGRGSGIAKSGSRGAALYHSRIQTGFRSQPVPSSSNQP
QGIHEGIRDPYGPEPEIPRGISYYGLEPFTTADWNVSQHGTFGVDPRMVS
QATLYRRNWPVAPGNTSLPGVLRRPTLDTYLGLFRWDCERLRSVPQTLHR
RDKESQPRQGRVECYDSRQRHTPMRYFIPPLYPGDLPYVRIEPELHYYRR
LVVKICQYDSLPQQYLPASPHLVCFDRPYNTIHWANRRRWGVDAATEARI
RTRSSFNRVMHGFHNVEFFSQPNKGRTSWYVARPEWWNAYEVPMSLSVPT
PPVLAYFGSYITRNHDRYYLIWSIALAEWAVLVAILALQAARDGIDWDCR
SREAEIYRDGVQPPGRMFFIPPRVIRNIRLFGIGTIVAGTDYSIEQLESL
LTQVESFPWGAKQGWEVFDPVSWKVVSRAEQRYPGAPTDQGPPGSPEPFP
TVVESPAATPVVTSAPTPAPEGRNTPAHTGATPLLPSTTRVDGPPRAILG
GVMAAAAAPVPSQVDSQAISGLMARVRQACVVNFQRAGPTSVVEALTLLE
SILPRHAQYMRSFSQIGEFRNRFQVELYQMATNQVAGLATAMGPTPTNPL
EDPLFGASLNPGLLAATQAPLHIGSSAPPSVAQASAPPPMGADVMPGVSV
PTSTPVGHGSAPSQAPGQAHLFQPWPGAHQNTTPGRGSSAGGSSGPHFAT
HPSG*
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