Ggra1563.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1563.t1
Unique NameGgra1563.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length352
Homology
BLAST of Ggra1563.t1 vs. uniprot
Match: A0A2V3J0Y9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Y9_9FLOR)

HSP 1 Score: 261 bits (668), Expect = 1.810e-83
Identity = 136/213 (63.85%), Postives = 158/213 (74.18%), Query Frame = 0
Query:  128 MIDLRLGERLFSNTT-CMSCAGSNAVSVPLLDPLGYHAMVCPVGLGATRRHNALRDVFYNCLKQPPLCLQVSREWKFPSQQHLDENAQWRMDLLIDDIRFHAKPIGVDVTVVSPGSRNYTLAASRNAAAXXTKAEALKRTKYDAICADNNVQFVPFAFDVHGGLGDSAKQFARRIAEYVSSVRGSNPITEYHTLALRLERTVLQLTAAAVNRR 339
            MIDLRLGE+LFS +T C+ CA +N   VP LD  GYHAMVC VGLGATRRHNAL++V +  LKQ PLCL V+ E  FPSQQHL E  Q RMDLLIDD RF+ +P+ +D+TVVSP + ++   AS+ AA     AEA KRTKYDA+CA N   F P  FDV GG G + K F RR+AEY SSVRGS P TEYHT+ LR+ERTVLQLTAAAVNRR
Sbjct:    1 MIDLRLGEKLFSGSTPCLLCAAANYAVVPPLDEHGYHAMVCTVGLGATRRHNALQNVLFAVLKQSPLCLHVTGELTFPSQQHLPEVQQQRMDLLIDDTRFNRRPVRLDITVVSPHNDSFLTYASKEAAGAARPAEAQKRTKYDALCATNGTSFNPIGFDVQGGAGPAGKLFFRRLAEYTSSVRGSKPGTEYHTILLRVERTVLQLTAAAVNRR 213          
BLAST of Ggra1563.t1 vs. uniprot
Match: A0A2V3IL37 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL37_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 1.870e-30
Identity = 59/100 (59.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:  161 GYHAMVCPVGLGATRRHNALRDVFYNCLKQPPLCLQVSREWKFPSQQHLDENAQWRMDLLIDDIRFHAKPIGVDVTVVSPGSRNYTLAASRNAAAXXTKA 260
            GYH MVC VGLGATRRHNAL DV +  LKQ PLCL V+REW  PSQQHL E  Q RM LLIDD+RF+ + +G+D+T+VSP +  +   AS  AA    +A
Sbjct:    9 GYHVMVCTVGLGATRRHNALPDVLFAALKQSPLCLHVTREWTLPSQQHLPEVPQQRMYLLIDDVRFYERQVGLDITLVSPQNDLFLTYASMEAAGAARRA 108          
BLAST of Ggra1563.t1 vs. uniprot
Match: A0A2V3IUU1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUU1_9FLOR)

HSP 1 Score: 100 bits (249), Expect = 2.480e-22
Identity = 56/109 (51.38%), Postives = 69/109 (63.30%), Query Frame = 0
Query:  234 DVTVVSPGSRNYTLAASRNAAAXXTKAEALKRTKYDAICADNNVQFVPFAFDVHGGLGDSAKQFARRIAEYVSSVRGSNPITEYHTLALRLERTVLQLTAAAVNRRRWT 342
            DVT+VSP +  +   A   A    T+AEAL  +KY  +C  ++ +  P  FDVHGG G+SAK   RR AE+    RG+ PI EYH LA+ LERT LQLTAAAVNR R T
Sbjct:   11 DVTIVSPHNTMHISLAFTQAGGAATRAEALNISKYAHLCHIHHTELEPVGFDVHGGAGESAKSLLRRNAEFFGQKRGTKPIIEYHYLAMCLERTELQLTAAAVNRCRLT 119          
The following BLAST results are available for this feature:
BLAST of Ggra1563.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J0Y91.810e-8363.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL371.870e-3059.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUU12.480e-2251.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:468182..469237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1563.t1Ggra1563.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 468182..469237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1563.t1 ID=Ggra1563.t1|Name=Ggra1563.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=352bp
MAAWSLINSQIQQALQPFAVVPSHFMRLAQIANVIKDSYALSHEFAFDSL
TARADENGSIAKLQHLYQDAIIDHLASLNAPPRTETYTHRLQRARLKSVS
TVEASLCFTSFIHPTSNPSPAPEIMKTMIDLRLGERLFSNTTCMSCAGSN
AVSVPLLDPLGYHAMVCPVGLGATRRHNALRDVFYNCLKQPPLCLQVSRE
WKFPSQQHLDENAQWRMDLLIDDIRFHAKPIGVDVTVVSPGSRNYTLAAS
RNAAAAATKAEALKRTKYDAICADNNVQFVPFAFDVHGGLGDSAKQFARR
IAEYVSSVRGSNPITEYHTLALRLERTVLQLTAAAVNRRRWTLSTQAHAT
A*
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