Ggra1559.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1559.t1 vs. uniprot
Match: A0A2V3J0T1 (Mediator of RNA polymerase II transcription subunit 20 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0T1_9FLOR) HSP 1 Score: 334 bits (857), Expect = 1.200e-114 Identity = 160/211 (75.83%), Postives = 188/211 (89.10%), Query Frame = 0
Query: 1 MGAKCVYNISTEGTSPAMVQREIIRRIEAHTGRKSTTWQVNVSIHATPDKKRPTLELVTLPDVANRMYIISQPLVTEAEPEILRMLGRMSTYVPKVTLSARGWEYDFVDFSVRVGMSFDRHGGATGVVVQIEYQPCSYTADCESLIAELMERIAAPLVPPPQANSDPGISAAATTAYNYNRIEIDSKKFTEKDLVPFSHRTEALLFARLLR 211
MGAKCVY+ISTEG SPAMV+REIIRRIEAHTGR+ T+WQV VS H PDKKRPT+E+V+LPD+ +R+++IS PLVTEA+P ++ +L R+S Y PK SARG ++DFVDF VRVGMSFDRHGGATGVVVQIEY+PCSYTADCE LIAELMERIAAPLVPPPQAN DPGISAAATT+YNY R+++D+ KF +KDL+PFSHRTEALLFA+LLR
Sbjct: 1 MGAKCVYDISTEGKSPAMVEREIIRRIEAHTGRRLTSWQVTVSFHTNPDKKRPTIEIVSLPDIKDRVFLISPPLVTEAQPTLVPLLRRISNYSPKYNRSARGLQFDFVDFLVRVGMSFDRHGGATGVVVQIEYRPCSYTADCERLIAELMERIAAPLVPPPQANHDPGISAAATTSYNYTRVDVDATKFNDKDLMPFSHRTEALLFAKLLR 211
BLAST of Ggra1559.t1 vs. uniprot
Match: A0A7S3A9S3 (Mediator of RNA polymerase II transcription subunit 20 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9S3_9RHOD) HSP 1 Score: 138 bits (348), Expect = 2.240e-37 Identity = 78/211 (36.97%), Postives = 117/211 (55.45%), Query Frame = 0
Query: 1 MGAKCVYNIS-TEGTSPAMVQREIIRRIEAHTGRKSTTWQVNVSIHATPDKKRPTLELVTLPDVANRMYIISQPLVTEAEPEILRMLGRMSTYVPKVTLSARGWEYDFVDFSVRVGMSFDRHGGATGVVVQIEYQPCSYTADCESLIAELMERIAAPLVPPPQANSDPGISAAATTAYNYNRIEIDSKKFTEKDLVPFSHRTEALLFARLL 210
MGAKC++ I E + A V +E+ RR+EAHTGR+ WQV+ + + RP + + T + + Y ++ E + + +L ++ P + +G EYD VDF+VRVGM F++ G T VV+I Y PCS +C LI ELM++IAAPLV P + D +AAA T Y + + D +K PFS R A+L++ +L
Sbjct: 1 MGAKCLFRIQINEYYNSAQVHKELQRRVEAHTGRRVGPWQVSAQQYGSKGNVRPPVVVFTTSEEPEKRYFLTGKHAIETDDGLSALLSKIPALTPTQSFMVKGIEYDLVDFTVRVGMVFEK-SGPTSNVVEIGYLPCSIVDNCVGLITELMDKIAAPLVAPQDSRQDSQANAAAETNYEFRLVPDDFQKVEGLANTPFSMRHTAMLYSAML 210
BLAST of Ggra1559.t1 vs. uniprot
Match: A0A7S1ESA9 (Mediator of RNA polymerase II transcription subunit 20 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESA9_9RHOD) HSP 1 Score: 79.3 bits (194), Expect = 2.920e-14 Identity = 60/195 (30.77%), Postives = 92/195 (47.18%), Query Frame = 0
Query: 1 MGAKCVYNISTEGTSPAMVQREIIRRIEAHTGRK------------------STTWQVNVSIHATPDKKR------PTLELVTLPDVANRMYIIS-QPL-----VTEAEPEILRMLGRMSTYVPKVTLSARGWEYDFVDFSVRVGMSFDRHGGATGVVVQIEYQPCSYTADCESLIAELMERIAAPLVPPPQANS 165
MG +CVY +S E +++EI+RRIEAH+GR+ +T Q+ S TP L +TL + ++++ + P + A E+ +L R+S K S G YD DF++RV + D+ A GVV+ +EY C A+C L+ EL+ R+ APLV P N+
Sbjct: 1 MGVRCVYRLSVESYDATALEKEILRRIEAHSGRRKSGTCKASFTQFAFGTTVATQSQLPPSTDNTPISSTLKTGILQGLYELTLSEAPRQIFLFALHPTARAVQLLHASSEMHALLPRISNVSEKHKKSTFGMLYDLADFTLRVCLLMDK-SKAMGVVLDVEYGACDSLAECFELLDELVSRLCAPLVAAPPLNN 194
BLAST of Ggra1559.t1 vs. uniprot
Match: A0A1Y1YBK9 (Mediator of RNA polymerase II transcription subunit 20 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YBK9_9FUNG) HSP 1 Score: 56.6 bits (135), Expect = 2.220e-6 Identity = 45/198 (22.73%), Postives = 90/198 (45.45%), Query Frame = 0
Query: 1 MGAKCV--YNISTEGTSPAMVQREIIRRIEAHTGRKSTTWQVNVSIH--ATPDKKRPT---LELVTLPDVANRMYIISQPLVTEAEPEILRMLGRMST-YVPKVTLSARGWEYDFVDFSVRVGMSFDRHGGATGVVVQIEYQPCSYTADCESLIAELMERIAAPLVPPPQANSDPGISAAATTAYNYNRIEIDSKKFT 190
MG CV + + S M+Q I++ + G+ S W ++ ++ P K T L LV + ++ + ++ EA+ E+ ++ ++ +V + L G+ +D DF +R G + G++++IEY+PCS C + +E ++ + +PP G + T Y Y + + S+ F+
Sbjct: 1 MGVTCVLRWTDANGAQSLNMLQERIVK---VYHGKISGRWNLSCKVYRDTNPINKMGTGKLLYLVYHSSYPSSVFSMIDGVIVEADRELDFIVNKLKNIWVTRQNLQVEGYSFDIGDFVLRAG-NIMVGSSYKGMMIEIEYKPCSIPTQCNDIFSEFLQNV----IPP-------GAKYSLETDYKYESVGLSSETFS 183 The following BLAST results are available for this feature:
BLAST of Ggra1559.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1559.t1 ID=Ggra1559.t1|Name=Ggra1559.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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