Ggra1556.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1556.t1
Unique NameGgra1556.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Homology
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BLAST of Ggra1556.t1 vs. uniprot
Match: R4XAK6 (Uncharacterized protein n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XAK6_TAPDE)

HSP 1 Score: 55.5 bits (132), Expect = 6.160e-7
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 0 
Query:    4 SWPFFSVIVATALAYVPYFTRVVLLRKFGKFDNTAPRDYDGQFRSLAKDKQ-ALAKRLMGCHINQIEMLGVYAAGVAVNLSSRRNDSILIAITALYVVFRIAYIAAYAGPQYLG-GYVRSGMFVGSMVMIMLLWVRA 138
            ++  +++ VA  L+  P+F    L  K GKFDNT PR+   + ++     Q  + +R      N  E +G++AA V     +R   S + +++  Y+  R+ Y   Y   + L    VRS +FVG +V IM L+V+A
Sbjct:    5 NYSLYTIPVAWVLSIAPHFYAASLANKVGKFDNTNPRNSTEKLKAKMSAAQLGMYQRAEAAQQNGFENIGLFAASVVAANVARVPVSTVNSLSLFYLASRVVYNLLYINTESLPISNVRSVVFVGGIVSIMTLFVKA 141
The following BLAST results are available for this feature:
BLAST of Ggra1556.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R4XAK66.160e-730.66Uncharacterized protein n=1 Tax=Taphrina deformans... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023352Membrane associated eicosanoid/glutathione metabolism-like domain superfamilyGENE3D1.20.120.550coord: 4..140
e-value: 6.5E-12
score: 47.5
IPR023352Membrane associated eicosanoid/glutathione metabolism-like domain superfamilySUPERFAMILY161084MAPEG domain-likecoord: 7..137
IPR001129Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) proteinPFAMPF01124MAPEGcoord: 12..140
e-value: 1.8E-11
score: 44.0
NoneNo IPR availablePANTHERPTHR35371:SF1INNER MEMBRANE PROTEINcoord: 5..139
NoneNo IPR availablePANTHERPTHR35371INNER MEMBRANE PROTEINcoord: 5..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..111
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:456153..456575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1556.t1Ggra1556.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 456153..456575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1556.t1 ID=Ggra1556.t1|Name=Ggra1556.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MPFSWPFFSVIVATALAYVPYFTRVVLLRKFGKFDNTAPRDYDGQFRSLA
KDKQALAKRLMGCHINQIEMLGVYAAGVAVNLSSRRNDSILIAITALYVV
FRIAYIAAYAGPQYLGGYVRSGMFVGSMVMIMLLWVRAAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023352MAPEG-like_dom_sf
IPR001129Membr-assoc_MAPEG