Ggra1553.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1553.t1 vs. uniprot
Match: A0A2V3J0M6 (DNA-directed RNA polymerase subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0M6_9FLOR) HSP 1 Score: 1714 bits (4438), Expect = 0.000e+0 Identity = 840/948 (88.61%), Postives = 893/948 (94.20%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKN---GKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVPRVGLTDVPGESNMVTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
+TYSAPIYVD+KY RG + VL KLMIGKIPIMLRSNNC+LK KSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKD RG++ANVQSSTHERKSRTTLL+KGN+LYLNHNIL+ DIN+AIVLRAMGIETDQEIIQL+GK+P+FVDGMTPTLHECAQEG+HT+ QALL++GKKAKTFKSSS G G R G+SS+R+ + SFK P T+ P PHP+QKTIDHARELLAGVILAHVPVK F+FWDK+IY+ARMCRRVL A+DDPS +DDKDYYGNKRLELAGQLLSLLFEDLFKK N+DLKK++DTQIQRIASKVAKDR+RRR+SDGTD+GRAIPRPN+D KYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHSQP KLT YLRHLRR+GA+GEYVSVFEQPE K VHVACDGGRVTRPLIIVD ETG+PRV D HVEKVLKGLMGWKDLLQEGLIEYLDVNEENNT IATYETDI GKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIP+VGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHA GCRR+ NGQCDRIMP PEDP K +N G+PK+HPVY +LD DGIVAPGEQ+S GM+FVNKEVPRVGLTDVPGE++ V+YRPQGL+FKGPSPV+CDKVLLTSNDHDHVLVKVMLRETRRPE+GDKFSSRHGQKGVCGLIVSQEDMPFSD GIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEG CGDGTAFHGDK+EVCA SLVRAGYNYNGKDFVYS
Sbjct: 137 ITYSAPIYVDVKYTRGSDLVLSQKLMIGKIPIMLRSNNCVLKNKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDNRGLMANVQSSTHERKSRTTLLLKGNRLYLNHNILEVDINIAIVLRAMGIETDQEIIQLIGKDPKFVDGMTPTLHECAQEGVHTETQALLFIGKKAKTFKSSSSGFGSRTGYSSSRNASFSFKMPA-KTDPNEPVPHPKQKTIDHARELLAGVILAHVPVKQFNFWDKAIYMARMCRRVLLAMDDPSAVDDKDYYGNKRLELAGQLLSLLFEDLFKKFNSDLKKSVDTQIQRIASKVAKDRTRRRISDGTDLGRAIPRPNVDVSKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHSQPHKLTVYLRHLRRTGAIGEYVSVFEQPEHKVVHVACDGGRVTRPLIIVDTETGMPRVQDEHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTFIATYETDIEHGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPIVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHATGCRRYPNGQCDRIMPAPEDPFRKEENSNSGRPKIHPVYSSLDLDGIVAPGEQLSKGMVFVNKEVPRVGLTDVPGETSAVSYRPQGLKFKGPSPVVCDKVLLTSNDHDHVLVKVMLRETRRPEIGDKFSSRHGQKGVCGLIVSQEDMPFSDKGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGHCGDGTAFHGDKIEVCAASLVRAGYNYNGKDFVYS 1083
BLAST of Ggra1553.t1 vs. uniprot
Match: R7QMZ9 (DNA-directed RNA polymerase subunit beta (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMZ9_CHOCR) HSP 1 Score: 1390 bits (3598), Expect = 0.000e+0 Identity = 697/950 (73.37%), Postives = 783/950 (82.42%), Query Frame = 0
Query: 2 TYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKNGKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVPR-VGLTDVPGESNMVT-----YRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
TYSAPI VDIK+ RG + VL L+IGKIPIMLRS NCIL KSD+ELA +GECPLDPGGYFVV+G EKVIL+QEQLSKNRIIIE D RG+ ANVQSSTHERKSRTTL+VK K+YL+HN L+AD+N+AIVLRAMG+ETDQEI+QL+G +PR+VDGM PTLHECAQEGI+T QALL++GKKAKTF+ +FG GP P AGVILAHVPVKHFDFWDK +++A+M RR+L A+DDPST+DDKDYYGNKRLELAGQLL+LLFEDLFKK NTDLK+TIDT I + +K A+DRSR+R+ FRTDTITQGLEFAISTGNW+VKRFKMER+GVTEVLSRLSFISA+GMMTRITSQFEKTRKVSGPRALQPSQWGMLCP+DTPEGEACGLVKNLALMTHVTTDD+PA LERLLYDLGVQPT LS E++NEN VV LNGL LGVHSQP+KLT LR +RR G +GEYVSVFEQPE K VH+ACDGGRVTRPLIIVD TG PR+ D HV ++ KGLM W+DLL+EGLIEYLDV+EENNTLIATYE+DI+ GKTTH+EIAPWTILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQH+RTDTLLYLLSYPQRPLVQTK + +VGFERLPGGQNASLMVMSYSGYDIEDA+VLN+AS+DRG+GRCIV RKH++GCRR++NG CDRIMP ++ K G + + ALD DGI+APGE++ GMIFVNKEVP+ LT + ++ YRPQ L FKGPS V DKVLLTSND DHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIV+QEDMPFSD GIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEG+C GTAF GD+++ CAESLV AGYNYNGKDFVYS
Sbjct: 138 TYSAPITVDIKHTRGDDIVLSRNLVIGKIPIMLRSGNCILSNKSDKELADVGECPLDPGGYFVVRGTEKVILIQEQLSKNRIIIENDQRGITANVQSSTHERKSRTTLIVKHGKIYLHHNTLEADVNIAIVLRAMGVETDQEIVQLIGTDPRYVDGMAPTLHECAQEGINTSTQALLFIGKKAKTFRGPAFG------------------------GRPGPRPS-------------AGVILAHVPVKHFDFWDKCVFVAQMLRRILIAMDDPSTVDDKDYYGNKRLELAGQLLALLFEDLFKKFNTDLKRTIDTHITKSQNKAARDRSRKRLD-------------------FRTDTITQGLEFAISTGNWHVKRFKMERSGVTEVLSRLSFISALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPADTPEGEACGLVKNLALMTHVTTDDDPAPLERLLYDLGVQPTSILSGEEVNENDVVFLNGLILGVHSQPRKLTYRLREMRRKGFIGEYVSVFEQPEHKWVHIACDGGRVTRPLIIVDSVTGQPRIFDEHVSRLRKGLMVWRDLLEEGLIEYLDVSEENNTLIATYESDILPGKTTHIEIAPWTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHIRTDTLLYLLSYPQRPLVQTKTLELVGFERLPGGQNASLMVMSYSGYDIEDAIVLNKASLDRGFGRCIVIRKHSSGCRRYSNGSCDRIMPRMDEVGSKDNPGAVRRNERLSALDKDGIIAPGEKLEKGMIFVNKEVPQDTTLTGAAAAAAIIIGGPQEYRPQPLSFKGPSTVAADKVLLTSNDLDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVTQEDMPFSDKGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGKCRYGTAFDGDRLDECAESLVSAGYNYNGKDFVYS 1031
BLAST of Ggra1553.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E13B7 (LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E13B7) HSP 1 Score: 1170 bits (3028), Expect = 0.000e+0 Identity = 584/952 (61.34%), Postives = 727/952 (76.37%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIANVQSSTHERKSRTTLLVKGNKLYLNHNILDAD-INVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKD-RSRRRMSDGTDIGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENHVVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKNGKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVP------RVGLTDVPGESNMVTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVY 944
+TYSAPI V +++ RG E V+ + IG IP+MLRSN C L K++++LA LGECPLDPGGYFVV+G EKV+LMQEQLS+NRII+EKD +G+ A+VQSS HER++RTT++++ +LYL HN L+ D +N+AIV RA+G+E+D E++Q +G + FVD + PT+ ECAQ GI T QAL ++G + KTF++ G+ R ID+AR+LLA IL+H+P KHF+F +K +++A+M RR+L+A++DP+ +DDKDYYGNKR+EL GQL++LLFEDLFKK N+D+K++IDT IQ+ + K R R+ + + + R+ R +D + RTDTITQGLEFAISTGNW+VKR KMER+GVTEVLSRLSFISA+GMMTR+TSQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGEACGLVKNLAL++HVT + + L RLLYDLGVQ T LS +++NE+H+V LNG LG+HS+P L +R+LRR G + E++SVFE+ EQ+ V+VA D GR+ RPLIIVD +G+PR+ H+ ++ G + W+DLL++G++E++DVNEENN +AT+E +IV G+TTHLEIAP TILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQH RTDTLLYLL+YPQRPLVQT+ + +VGFERLPGGQNASL VMSYSGYDIEDA+VLN+AS+DRG+GRC V RK+A GCRR+ G DRIMP P D +I KV V L DGI APG ++SSG IFVNKEVP R G+ YR Q L +KG + DKVL++SND DHVLVK M+R+TRRPE+GDKFSSRHGQKGVCGLI QEDMPFSD GIVPDLIMNPHGFPSRMTVGKMIEF+AGKAGVFEGR +GTAF GD VE CA +LV GYNYNGKD Y
Sbjct: 189 ITYSAPIEVTLRFTRGEELVVQKHVRIGCIPVMLRSNICTLYNKTEQDLASLGECPLDPGGYFVVRGTEKVVLMQEQLSRNRIIVEKDPKGISASVQSSAHERRTRTTVMMRNRRLYLQHNTLEQDGVNLAIVFRAIGVESDLEMLQFIGTDAEFVDALAPTIAECAQYGIRTATQALRHIGNRVKTFRAPFGGASKR--------------------------------KIDNARDLLANTILSHIPAKHFNFSEKVVFLAQMARRMLRAMNDPTLLDDKDYYGNKRIELPGQLIALLFEDLFKKFNSDMKRSIDTAIQKEQTHAGKALRKSGRIEEASQV-RSKYRSLVDVTRCIRTDTITQGLEFAISTGNWSVKRLKMERSGVTEVLSRLSFISALGMMTRVTSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALLSHVTVEADELPLVRLLYDLGVQSTSYLSGDEINESHIVFLNGNLLGIHSEPDVLAHRIRYLRRKGLIREFISVFERAEQQCVYVASDCGRICRPLIIVDPNSGVPRLRSDHLVRITGGTLTWRDLLEDGIVEFVDVNEENNCFVATWEVNIVPGRTTHLEIAPLTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHKRTDTLLYLLTYPQRPLVQTRTLTLVGFERLPGGQNASLAVMSYSGYDIEDAIVLNKASLDRGFGRCSVIRKNATGCRRYTTGVSDRIMPPPPDCDIS------KVVLVNSILTGDGIAAPGMKLSSGHIFVNKEVPADTAIQRNGVPSAMQIGQPAMYRAQPLVYKGHVTAVVDKVLVSSNDSDHVLVKTMIRDTRRPEIGDKFSSRHGQKGVCGLIAQQEDMPFSDRGIVPDLIMNPHGFPSRMTVGKMIEFVAGKAGVFEGRFRNGTAFDGDHVEECARALVARGYNYNGKDMFY 1101
BLAST of Ggra1553.t1 vs. uniprot
Match: A0A1X6NUN4 (DNA-directed RNA polymerase subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUN4_PORUM) HSP 1 Score: 1138 bits (2944), Expect = 0.000e+0 Identity = 599/974 (61.50%), Postives = 718/974 (73.72%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVI-ANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSS----FGSGHRGGFSSTRSTTQ----SFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENH--VVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKNGKP----------KVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVPR-----VGLTDVPGESNMVTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYSVET 948
MTY+API D++Y RG E VL IG++PIMLRS +C L GK+D ELA LGECPLDPGGYFVV+G EKVIL+QEQLSKNRII+E DA+G + A+VQSSTHERKSRTT++VK ++YL HN L D+ V + LRAMG+ETDQE++QLVG ++DG+ P+L ECA I+T QAL +LG+K ++ + + FG +TT + P+ N P K +HAR+LLAGV+LAHVPV+ ++F DK IY+A+M RR+L A +DP+ IDDKDYYGNKRLELAGQLLSLLFEDLFKKL +D+K+ + + SRR G + DA + R DTITQGLEFAISTGNW+VKRFKMERAGVTEVLSRLSFI+A+GMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGE+CGLVKNLALMTHVTTDD+ A L RLLYDLG + T LS +LNE + +V LNGL LGVH+ P L LR LRR +GE+VSV+ P + +++ACDGGRV RPLIIV G+P V+D H+ + +G + W+DL+ +GLIEYLDVNEENN LIAT E +I+ G TTHLEIAP TILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQH R DTLLYLLSYPQRP+VQT+ + +VGF RLPGGQNASL VMSYSGYDIEDAVVLNRAS+DRG+GRC+V RKH++ RR+ N DRIMP + + Y ALD DG+V+PG ++ SG + NKEVP G + PG + + YR L FKGP+ + +KVLLTS++ +H +VKVM+RETRRPELGDKFSSRHGQKGVCGLI QED+PF+D G+ PDLIMNPHGFPSRMTVGKMIEFIAGKAGV EGR GTAF GD++E CAE+LV AGY+Y+GKD YS T
Sbjct: 16 MTYAAPILADVQYVRGREVVLRRDWAIGRMPIMLRSEHCYLSGKTDAELAGLGECPLDPGGYFVVRGTEKVILIQEQLSKNRIIVEFDAKGCLCASVQSSTHERKSRTTIVVKAGRMYLRHNTLSEDVPVIVALRAMGVETDQEVVQLVGSGDMYMDGVEPSLQECASLNIYTSSQALDFLGQKVRSVRPAGGLQRFGGXXXXXXXXXXATTGVGMVADGVPSMN-------PAAVSKRKEHARDLLAGVVLAHVPVRRYNFRDKCIYMAQMMRRILAAAEDPTMIDDKDYYGNKRLELAGQLLSLLFEDLFKKLCSDIKRQAELHFSKQKKSDFSMPSRRGSGAGAGL-----MSGYDALQNVRGDTITQGLEFAISTGNWHVKRFKMERAGVTEVLSRLSFIAALGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDDSAPLARLLYDLGTEDTAQLSGAELNEGNGALVFLNGLILGVHANPPALAAALRALRRRALIGEFVSVWVHPPHRAIYIACDGGRVCRPLIIVSA-AGVPLVTDDHMTGIGRGTLVWRDLMHDGLIEYLDVNEENNALIATTEPEIMNG-TTHLEIAPLTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHCRADTLLYLLSYPQRPMVQTRTLDLVGFNRLPGGQNASLAVMSYSGYDIEDAVVLNRASVDRGFGRCVVLRKHSSTMRRYPNHTTDRIMPXXXXXXXXXXXXXXXXXXXXXXAARSNARYSALDQDGLVSPGARLKSGYFYANKEVPADTAVVQGGSAGPGRAP-IAYRAAPLIFKGPADAVAEKVLLTSSETEHFVVKVMVRETRRPELGDKFSSRHGQKGVCGLIAPQEDLPFNDAGVCPDLIMNPHGFPSRMTVGKMIEFIAGKAGVHEGRFRMGTAFDGDRIEDCAEALVAAGYSYSGKDLFYSGST 974
BLAST of Ggra1553.t1 vs. uniprot
Match: A0A7S1XB87 (DNA-directed RNA polymerase subunit beta n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XB87_9RHOD) HSP 1 Score: 1083 bits (2801), Expect = 0.000e+0 Identity = 564/956 (59.00%), Postives = 686/956 (71.76%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARG-VIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQE-GIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPNIDAPKYFRTD-TITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNE--NHVVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPE----DPNIKSKNGKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVPRVG--LTDVPGESNMVTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
MTY+API VD++Y RG + VL H + IG++PIMLRS CIL GK + L LGECPLDPGGYFV++G EKVIL+QEQLSKNRI++E D++G V ++VQSSTHERKSRT ++ K + YL HN DI V + L+AMGIETD EI QLVG E + M T+ + E I T+ QAL Y+G + + + GP H ++ D ARE LA V+LAHVPV +F+FW K++++A+M RR++ A+ DP+ IDD+DYYGNKRLELAGQLLSLLFEDLFKK DLK+ DT ++ + + +D FRT+ TI+QGLEFAISTGNW+VKRFKMERAGVT+VLSRLSFISAVGMMTRITSQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGE+CGLVKNLALMTHVTTD +P+ + RL Y+LGV+ + L+ ++N N V+ LNGL LG H QP KL LR LRR G V E+VS+ E P Q VH+A DGGRV RPLIIVD PRV H+++V+KG W D L EGL+EYLDVNEENN LIA E DI+ + THLEIAP ILG+CAGLIPYPHHNQSPRNTYQCAMGKQAIGA+AYNQH RTDTLLYLLSYPQR LV+TK + +VGF+RLPGGQNA L VMS+SGYDIEDAV+LN+AS+DRG+GRC V RKH R++ NG DR++ PE ++ S + ++ + ALD DGI A G++V G IF+NKE P + + P S V YRP + FKGP I D+VL+TSN+ DH L+K ++RETR PE+GDKFSSRHGQKGVCGLIV Q+DMPF+D G+ PDLIMNPHGFPSRMTVGK+IEFI+GKA VF G+ GDG+AF GDK+EVCA LVR G+++ GKD YS
Sbjct: 123 MTYAAPITVDVQYTRGRDVVLRHDVPIGRMPIMLRSCRCILTGKDEVALGGLGECPLDPGGYFVIRGTEKVILIQEQLSKNRILVELDSKGQVCSSVQSSTHERKSRTMIVTKKDCFYLKHNNFTEDIPVTVALKAMGIETDHEITQLVGTEDIYASAMATTIAKATFELRIFTEQQALEYIGDRVRFARK----------------------------GKSGPRDHVKR---DLARETLAQVVLAHVPVPNFNFWQKAVFVAQMLRRMIAAVIDPTAIDDRDYYGNKRLELAGQLLSLLFEDLFKKFCQDLKRHADT----------------------NLSKPVKAGPLDITTAFRTNNTISQGLEFAISTGNWHVKRFKMERAGVTQVLSRLSFISAVGMMTRITSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDADPSPIARLCYNLGVEDIHTLTGAEINNAFNAVITLNGLVLGCHRQPNKLGSDLRRLRRRGLVDEFVSICEVPSQNAVHIASDGGRVCRPLIIVDNMK--PRVHKGHIDEVVKGKRKWLDFLHEGLVEYLDVNEENNALIALDERDIIHDRYTHLEIAPLAILGVCAGLIPYPHHNQSPRNTYQCAMGKQAIGAVAYNQHQRTDTLLYLLSYPQRALVETKMVSLVGFDRLPGGQNACLCVMSFSGYDIEDAVILNQASVDRGFGRCTVVRKHGTTMRKYPNGSQDRVV-APEAVEVSDSMASSEARRQIR--FSALDVDGIAAAGDRVFPGSIFINKESPNDTSVIQEGPPGSKTVEYRPTPMTFKGPVEAIVDRVLITSNETDHFLIKAIIRETRTPEVGDKFSSRHGQKGVCGLIVQQQDMPFNDFGVCPDLIMNPHGFPSRMTVGKLIEFISGKAAVFSGKIGDGSAFGGDKLEVCAAELVRHGFSFTGKDLFYS 1020
BLAST of Ggra1553.t1 vs. uniprot
Match: A0A5J4YYN6 (DNA-directed RNA polymerase subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYN6_PORPP) HSP 1 Score: 1048 bits (2711), Expect = 0.000e+0 Identity = 555/977 (56.81%), Postives = 682/977 (69.81%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVI-ANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEG--IHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNE--NHVVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKNGKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVP----------RVGLTDVPGESNM-----------------VTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
+TY+API VD++Y +G V IG++PIMLRS NC L K ++ELA+LGECPLDPGGYF++KG EKVIL+QEQLSKNRI++E D++G + A+VQSSTHERKSRT L+VK + YL HN L D+ V I+ +AMG+ ++ EI+Q VG E F + + P++ ECA + T+ +AL +LG K + S +F HR + ++ +D ARE+LA +ILAHVPV +F+F K + +A+M RR+L A DP T+DD+DYYGNKRLELAGQLL+LLFEDLFKK +DLK+ D + + + D FR DTI+ GLEFAISTGNW VKRFKMERAGVT+VLSRLSFISA+GMMTRITSQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGE+CGLVKNLALMTHVTTDD+ + R Y+LGVQ L+ +LN NH+V LNGL +GVH P++L LRHLRR G +G++VSVF +Q+TV +ACDGGRV RPLIIV + L V H++++ L W D L++G+IEYLDVNEENNT I+ E+ I G TTHLEIAP+TILG+CAGLIP+PHHNQSPRNTYQCAMGKQAIGAIAYNQH R DTLLY LSYPQRPLVQTK I +VGF+RLPGGQNA L VMSYSGYDIEDAVVLNRAS+DRG+GRC V RKHA + + NG CDRI P++ S + K + + L+ DG+ G+++ G IFVNKE P + L +PG V YRP L +KG I DKV+ T+N+ DH L+KV++RETR PELGDKFSSRHGQKGVCGLI Q DMP++D G+ PDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEG +GTAF G V+ CA+ LV+AG++Y+GKD +YS
Sbjct: 197 ITYAAPITVDVEYTKGKMKVFKRDQPIGRMPIMLRSRNCRLWNKDEQELAELGECPLDPGGYFIIKGTEKVILIQEQLSKNRILVEYDSKGELCASVQSSTHERKSRTMLVVKHGRFYLRHNSLSEDVPVIILFKAMGMVSEAEIVQFVGTEQEFQEALVPSIEECASAAFNVRTEAEALEWLGAKVRV-SSKAF---HR--------------------------QYQSRRKLDQAREVLASIILAHVPVHNFNFKHKCVLVAQMIRRILIAKQDPETVDDRDYYGNKRLELAGQLLALLFEDLFKKFCSDLKRHADVVL----------------------AKPVVAAQFDIVTNFRQDTISAGLEFAISTGNWTVKRFKMERAGVTQVLSRLSFISALGMMTRITSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDDAEPVARFCYELGVQEVGILTGLELNHPRNHLVHLNGLIVGVHRYPKQLCEQLRHLRRLGRIGQFVSVFHSEKQRTVFLACDGGRVCRPLIIVHKGKSL--VQPRHLQELALKLRTWHDFLRDGIIEYLDVNEENNTFISWTESKIEAG-TTHLEIAPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAIGAIAYNQHHRVDTLLYFLSYPQRPLVQTKTISLVGFDRLPGGQNACLAVMSYSGYDIEDAVVLNRASLDRGFGRCCVVRKHATLLKTYPNGTCDRISA----PDLASMDEKRREK--HSVLESDGVAGVGQRLKPGQIFVNKESPVDTVTPATTNQAQLAFLPGGGASGGMRGSGAGSSGSAPATVAYRPTPLVYKGQEGGIVDKVVFTANEADHYLMKVLIRETRVPELGDKFSSRHGQKGVCGLIADQVDMPWNDQGVCPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGVFNEGTAFEGCSVDDCAKLLVKAGFSYSGKDMMYS 1112
BLAST of Ggra1553.t1 vs. uniprot
Match: A0A8J5XIQ9 (Uncharacterized protein n=6 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIQ9_DIALT) HSP 1 Score: 1019 bits (2634), Expect = 0.000e+0 Identity = 529/959 (55.16%), Postives = 671/959 (69.97%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHK-LMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARG-VIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNENH---VVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKNGKPKVHPV--YGALDDDGIVAPGEQVSSGMIFVNKEVP-----RVGLTDVPGESNMVTYRPQGLRFKGPS--PVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
+TYSAPI ++Y RG + ++ + ++IG++PIMLRS+ C+L GKS ELA++GECP+DPGGYFVV+G EKVIL+QEQLSKNRII+ KD +G V+A+V SSTHERKS+T L+ G + L HN + D+ + +VLRAMG+E+DQEI+QL+G EP +V+GM +L E G+ TQ +AL ++ K + F S +GS R Q +D AR++LA V+LAHVPV ++FW K +Y+ +M RR++ A DPS IDD DYYGNKRLELAGQLLSLLFEDLFKKL +LK+ D + + A D K R DTIT G AISTGNW+VKRFKMER+GVT+VLSRLSFISA+GMMTRI SQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGEACGLVKNLAL THVTTDD+ A + RL +LGV+ + L N +V +NG+ LG+H P + R LR LRR G +GE+VSV P Q+TVH+A D GRV RPLI+V E G+P V+ +H+ ++ +G+ W+D ++EGLIEYLDVNEEN++ IA YE D V TTHLEI P TILG+CAGLIPYPHHNQSPRNTYQCAMGKQA+GAIA NQH R DT+LYLL YP +PLV+++ I ++GF +LP G NA + VMSYSGYDIEDA++LNRAS+DRG+GRCIV RK++A +++AN DRI+ P S G K + + LD DGI A GE++ SG IFVNK+VP + T+ + +RP + +KGP D+V+++SN++DH ++K+ +R TR PELGDKFSSRHGQKGVCGLIV +DMPF+D G+ PD+IMNPHGFPSRMTVGKM+E +AGKA V +G GTAF GDKV+ CA LV+ G+NY GKDFV S
Sbjct: 114 ITYSAPIIASLEYTRGKKEIVRRRGMVIGRMPIMLRSSKCVLHGKSAEELARVGECPIDPGGYFVVRGVEKVILIQEQLSKNRIIVGKDNKGKVMASVTSSTHERKSKTNLVTNGGAILLRHNTMTEDVPIVVVLRAMGVESDQEILQLIGMEPTYVEGMAASLREAVVLGVTTQAKALDFISHKVRGF-SRPWGSSMR------------------------------QSRVDEARDVLANVVLAHVPVVAYNFWPKVVYVCQMLRRMISAQHDPSQIDDMDYYGNKRLELAGQLLSLLFEDLFKKLCAELKRQADAVLSKPTRAAA----------------------FDIAKCIRQDTITLGFSHAISTGNWSVKRFKMERSGVTQVLSRLSFISALGMMTRIMSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALTTHVTTDDDEAPIARLAMNLGVEDVHLLPGLDFGGNGRCTLVFINGMLLGMHRDPDRFVRSLRTLRRCGRLGEFVSVQLHPTQRTVHIAADAGRVCRPLIVV--EDGVPAVTPVHMSELAEGVRDWQDFIREGLIEYLDVNEENSSEIALYERD-VHADTTHLEIDPLTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGAIACNQHERIDTILYLLVYPHQPLVKSRTIDLIGFSKLPAGHNAVVAVMSYSGYDIEDALILNRASLDRGFGRCIVMRKYSANLKKYANQTSDRIVAPP------SATGAVKSVQLQRFRVLDADGICAVGERLQSGDIFVNKQVPVNTSDTITNTEALAGAGAEAFRPSPMSYKGPPHHDTYIDRVMISSNENDHFVIKIRVRSTRSPELGDKFSSRHGQKGVCGLIVGHQDMPFNDFGMAPDIIMNPHGFPSRMTVGKMMELLAGKAAVLDGHLRYGTAFGGDKVDDCASVLVKHGFNYAGKDFVTS 1010
BLAST of Ggra1553.t1 vs. uniprot
Match: A0A7S3E745 (DNA-directed RNA polymerase subunit beta n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E745_9RHOD) HSP 1 Score: 1018 bits (2633), Expect = 0.000e+0 Identity = 549/976 (56.25%), Postives = 670/976 (68.65%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLG--------------------------ECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVI-ANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPNIDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNE--NHVVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHA-NGQCDRIMPGPEDPNIKSKNGKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVPR-VGLTDVPGESNMVTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
+TYSAPI VD++Y G E V + ++IG++PIMLR C+L GK+D ELAKLG ECPLDPGGYF+VKG EKV+L QEQLSKNRII+E D++G++ A VQSSTHERKSRT +++K K+YL HN + DI V IV +AMG+E+DQEI+QLVG E FV+ T +L E A I TQ AL Y+G + + TR +S TN ARE LA +LAHVPV ++F K +Y+A+M RR+L AL D S +DD+DYYGNKRLELAGQL++LLFEDLFK NT++KK TQ + A+ + F IT GLE +ISTGNW+V+RFKM+RAGVT+VLSRLSFISA+GMMTR+ SQFEKTRKVSGPR+LQPS WGMLCPSDTPEGEACGLVKNLALMTHVTTDD + LLY LG + T +S +++N+ N +V LNGL LGVHS P LT+ R LRR G +GE+VSV + Q ++VACDGGRV RPLIIV E G P V+ H++++ W+D +Q+GLIEYLDVNEENN LIA E + G T H+EIAP TILG+CAGLIP+P HNQSPRNTYQCAMGKQA+GAIAYNQH R DTLLYLL+YPQRP+V+T+ + +VG RLPGGQNASL VMSYSGYDIEDAVVLN+AS+DRG+GRC V +K+ +R+ N DR+ P S +P Y ALD DGI PGE++ G IFVNK+VP LTD S + +R + +K P DKV++TSN+++ L+K M+RETRRPE+GDKFSSRHGQKGVCGLIV QEDMPFSD GI PDLIMNPHGFPSRMTVGK+IEF+ GKA VFEGR G+GTAF GDK++ CA +LV+AGY+Y GKDF YS
Sbjct: 138 ITYSAPITVDLQYTLGKEVVKQNGILIGRLPIMLRCCRCLLAGKNDLELAKLGSNWIRNMAVELHLANSIPLATCDNVGECPLDPGGYFIVKGTEKVVLTQEQLSKNRIIVEPDSKGLMSATVQSSTHERKSRTNIIMKAGKMYLKHNTIVEDIPVVIVFKAMGMESDQEIMQLVGSESEFVEAFTRSLEEAATLKILTQEAALAYVGARMRI----------------TRDMPRSLNR----TNL--------------AREFLAHTVLAHVPVVEYNFRSKCVYVAQMVRRILLALGDSSWVDDRDYYGNKRLELAGQLIALLFEDLFKTFNTEVKKRA-TQTLSKPHRAAQ---------------------FNIINLFPVSIITNGLESSISTGNWHVERFKMDRAGVTQVLSRLSFISALGMMTRVNSQFEKTRKVSGPRSLQPSTWGMLCPSDTPEGEACGLVKNLALMTHVTTDDEAGPVAELLYILGTEDTSVVSGDEINDKRNSLVYLNGLLLGVHSNPDALTKATRKLRRKGLIGEFVSVCQIEGQNAIYVACDGGRVCRPLIIV--ENGSPMVTQTHLDELKAKTRVWRDFVQDGLIEYLDVNEENNALIAVDEESVQEGST-HMEIAPLTILGVCAGLIPFPDHNQSPRNTYQCAMGKQAVGAIAYNQHRRVDTLLYLLTYPQRPMVETQVLTLVGGNRLPGGQNASLAVMSYSGYDIEDAVVLNKASLDRGFGRCCVIKKYTTSLKRYGKNNLRDRLAP-------LSATDRPSGSR-YEALDSDGIAPPGEKLVPGSIFVNKQVPSDAALTDAMTGS-VTEFRDAPVTYKAPVAGYVDKVVITSNENEDFLIKTMVRETRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFSDQGICPDLIMNPHGFPSRMTVGKLIEFVTGKAAVFEGRFGNGTAFAGDKIDECARALVKAGYSYTGKDFFYS 1045
BLAST of Ggra1553.t1 vs. uniprot
Match: M2VX80 (DNA-directed RNA polymerase subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VX80_GALSU) HSP 1 Score: 1002 bits (2591), Expect = 0.000e+0 Identity = 519/957 (54.23%), Postives = 660/957 (68.97%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARG-VIANVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVG---KEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPN----IDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNE-NHV-VVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKNGKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVPRVGLTDVPGESNM--VTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
+TY+APIYVD++Y RG E ++ + IG+IPIMLRS++CIL GK D +LA LGECPLDPGGYF+++G E+VIL+QEQLSKNRIIIE+D +G A V SSTHERKSRT+L+ K N +YL HN L DI + IV +A+ +E+DQEI+QL+G +E R + EC + + +AL Y+G + + F R G+S RS TI+ A+E+LAGVIL+H+P +F +KSIY+A M RR+L ++ +T+DDKDYYGNKRLELAGQLLSLLFEDLFKK N DLK+ D + +PN D K R DTI+ GLE AI TGNW VKRF+M RAG+T+VLSRLS+I+A+GMMTRITSQFEKTRK+SGPR+LQ SQWG+LCPSDTPEGE+CGLVKNLAL H+TTD L RL Y LGV+ S ++LN +H + LNG FLG+H R LRR GA+GE+VS+F + V+++CD GR+ RPLIIV E G P+V+ ++E++ + + + DL+Q+GL+EYLDVNEENN LIA E +I TTHLEI+P ILG+CAG+IPYPHHNQSPRNTYQCAMGKQAIG I YNQH+RTDTLLYLL+Y Q+PLV TK I + ++ LPGGQNA + VMSYSGYDIEDA++LNR+S+DRGYGRC V RKHA G RR+ NG CDR+ P + H + L++DG+ G ++S G +V KE P +T + + ++ V YRPQ +KGP + D+V++TSN H L+KVM+RETR PE+GDKFSSRHGQKGVCGLIV QEDMPF++ GI PD+IMNPHGFPSRMTVGK++E +AGKAGV G +GTAF GD +E CA LV+ G++Y GKDF+YS
Sbjct: 125 LTYAAPIYVDVRYTRGKEVLIRKDVAIGRIPIMLRSSHCILTGKKDGQLASLGECPLDPGGYFIIRGTERVILIQEQLSKNRIIIEEDKKGNYCATVTSSTHERKSRTSLVYKSNNIYLRHNSLVDDIPIWIVFKALEVESDQEIVQLIGLIEEEYRSYYFLLNHKKECISRHVQNRNEALEYIGSRVRLF---------RKGYSFRRS------------------------TIEEAQEVLAGVILSHIPTYQHNFRNKSIYLAFMVRRLLTVAENLTTVDDKDYYGNKRLELAGQLLSLLFEDLFKKFNADLKRHADM--------------------------VLSKPNRAAQFDIVKCMRPDTISVGLENAIGTGNWTVKRFRMHRAGITQVLSRLSYIAALGMMTRITSQFEKTRKISGPRSLQGSQWGLLCPSDTPEGESCGLVKNLALTAHITTDAEEEPLIRLCYILGVEDATLFSGDELNNPSHFRIFLNGKFLGIHRNASYFANIFRFLRRKGAIGEFVSIFVNEAENVVYLSCDSGRICRPLIIV--ENGKPKVTQQYIEQLERNQLEFTDLVQQGLVEYLDVNEENNALIALSEENIEPCSTTHLEISPLAILGVCAGVIPYPHHNQSPRNTYQCAMGKQAIGFIGYNQHLRTDTLLYLLTYAQKPLVNTKTISFIKYDELPGGQNAIVAVMSYSGYDIEDALILNRSSLDRGYGRCCVVRKHAFGLRRYPNGTCDRVCRPPS-----FSESSERTHMKFACLEEDGLPKVGGRLSPGQAYVYKETPMDTMTTMTSQQSIQQVGYRPQPFFYKGPDDAVIDRVVVTSNASTHALIKVMIRETRTPEVGDKFSSRHGQKGVCGLIVPQEDMPFNEQGICPDIIMNPHGFPSRMTVGKLLELMAGKAGVLSGEFKNGTAFDGDPLEDCASLLVQHGFSYTGKDFLYS 1015
BLAST of Ggra1553.t1 vs. uniprot
Match: DNA-directed RNA polymerase III subunit RPC2-like n=3 Tax=Astrocoeniina TaxID=123757 RepID=UPI001CF4994B (DNA-directed RNA polymerase III subunit RPC2-like n=3 Tax=Astrocoeniina TaxID=123757 RepID=UPI001CF4994B) HSP 1 Score: 1002 bits (2591), Expect = 0.000e+0 Identity = 526/955 (55.08%), Postives = 664/955 (69.53%), Query Frame = 0
Query: 1 MTYSAPIYVDIKYARGPENVLCHKLMIGKIPIMLRSNNCILKGKSDRELAKLGECPLDPGGYFVVKGAEKVILMQEQLSKNRIIIEKDARGVIA-NVQSSTHERKSRTTLLVKGNKLYLNHNILDADINVAIVLRAMGIETDQEIIQLVGKEPRFVDGMTPTLHECAQEGIHTQVQALLYLGKKAKTFKSSSFGSGHRGGFSSTRSTTQSFKAPTTNTNSKGPPPHPRQKTIDHARELLAGVILAHVPVKHFDFWDKSIYIARMCRRVLQALDDPSTIDDKDYYGNKRLELAGQLLSLLFEDLFKKLNTDLKKTIDTQIQRIASKVAKDRSRRRMSDGTDIGRAIPRPN---IDAPKYFRTDTITQGLEFAISTGNWNVKRFKMERAGVTEVLSRLSFISAVGMMTRITSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHVTTDDNPASLERLLYDLGVQPTYALSAEQLNEN--HVVVLNGLFLGVHSQPQKLTRYLRHLRRSGAVGEYVSVFEQPEQKTVHVACDGGRVTRPLIIVDRETGLPRVSDIHVEKVLKGLMGWKDLLQEGLIEYLDVNEENNTLIATYETDIVRGKTTHLEIAPWTILGICAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQHMRTDTLLYLLSYPQRPLVQTKQIPVVGFERLPGGQNASLMVMSYSGYDIEDAVVLNRASIDRGYGRCIVTRKHAAGCRRHANGQCDRIMPGPEDPNIKSKNGKPKVHPVYGALDDDGIVAPGEQVSSGMIFVNKEVPRVGLTDV----PGESNMVTYRPQGLRFKGPSPVICDKVLLTSNDHDHVLVKVMLRETRRPELGDKFSSRHGQKGVCGLIVSQEDMPFSDMGIVPDLIMNPHGFPSRMTVGKMIEFIAGKAGVFEGRCGDGTAFHGDKVEVCAESLVRAGYNYNGKDFVYS 945
MTYSAPI VDI+Y RG + V+ H L IG++PIMLRS+NC+L GKS ELA L ECP+DPGGYFV G EKVIL+QEQLSKNRII+E D +G I +V SST ERKSRT ++ KGNK L HN L D+ V +V +AMGIE +QEI+QLVG E + P+L EC + I++Q+QAL YLG K + R + +R+ ++ ARELLAGV+LAHVPV +DF K +++A M RRV+ A D + +DD+DYYGNKRLELAGQLLSLLFEDLFK+ N +LKK D + IP+P D K+ R D IT GL AIS+GNW +KRF M RAGVT+VLSRLSFISA+GMMTR+ SQFEKTRKVSGPR+LQPSQWGMLCPSDTPEGEACGLVKNLALMTH+TTD + + RL Y+LGV+ LS E+++ +VV LNG LGV ++L R +RR+G V E+VS+ + + V++A DGGRV RP IIV + G P+V D H++++++G ++D L EGL+EYLDVNEEN+ +A YE +I R +TTHLEI P+T+LG+CAGLIPYPHHNQSPRNTYQCAMGKQA+G+I YNQ R DTLLY L YPQ PLV+TK I ++ F++LP GQNA++ VMSYSGYDIEDA++LN+AS+DRG+GRC+V RK +R+AN DR+M P+ + G+ V + ALD DGI APGE++ + + VNK +P V T + PG+ Y+ + +KGP + ++VL+TSN + L+K++ R+TRRPE+GDKFSSRHGQKGVCGLIV+QEDMPFSD+GI PD+IMNPHGFPSRMTVGK+IE +AGKAGV G G GTAF GDKVE +LV G+NY GK+FV S
Sbjct: 105 MTYSAPITVDIEYTRGKQRVVRHNLPIGRMPIMLRSSNCVLTGKSPAELAALNECPIDPGGYFVANGTEKVILIQEQLSKNRIIVEADKKGTIGCSVTSSTAERKSRTNIVTKGNKFCLKHNALSEDVPVVVVFKAMGIECEQEIVQLVGCEDDVISTFAPSLEECHKLHIYSQLQALQYLGSKVR----------QRATWGKSRT------------------------KVEEARELLAGVMLAHVPVIKYDFKPKCVFLALMVRRVILACSDEANVDDRDYYGNKRLELAGQLLSLLFEDLFKRFNNELKKIAD--------------------------QTIPKPRAAQFDIVKHMRQDQITNGLVHAISSGNWIIKRFNMHRAGVTQVLSRLSFISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDQDEEPIVRLAYNLGVENLRLLSGEEISHPSVYVVFLNGNILGVSGNYKRLVETFRLMRRAGYVNEFVSICPNHQHRFVNIASDGGRVCRPYIIV--KNGKPKVQDRHIQELVQGFRSFEDFLHEGLVEYLDVNEENDCSVALYEKEITR-ETTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGSIGYNQRNRIDTLLYFLCYPQVPLVRTKTIDLIQFDKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYRKQNCLLKRYANQTFDRVM----GPSRDASTGE--VIWRHRALDADGICAPGERIENKQVLVNKSMPIVSPTGLQPGTPGQPPQPEYKDVPVSYKGPRDIYVERVLVTSNADEAFLIKILERQTRRPEIGDKFSSRHGQKGVCGLIVNQEDMPFSDLGICPDIIMNPHGFPSRMTVGKLIELMAGKAGVLHGHFGYGTAFGGDKVEDVCNALVEKGFNYVGKEFVTS 990 The following BLAST results are available for this feature:
BLAST of Ggra1553.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1553.t1 ID=Ggra1553.t1|Name=Ggra1553.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=967bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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