Ggra1550.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1550.t1
Unique NameGgra1550.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length267
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1550.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..221
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 9..98
e-value: 2.24192E-7
score: 45.6229
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 1..119
e-value: 4.2E-13
score: 51.1
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 6..110
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 5..110
e-value: 2.8E-7
score: 30.6
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 1..114
score: 13.539405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:432422..433644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1550.t1Ggra1550.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 432422..433644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1550.t1 ID=Ggra1550.t1|Name=Ggra1550.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=267bp
MERSITYQLELPDVQRQHIEVELRGAQLRITGRRFKSGEVVVEEHEEDTE
QNDDSGVKMAEGKKASLEYELQIKVGESTDEAGIKAEHRDGILKILIPLK
TTTVARKISITTVAHGRNTNGEAVEEAASSASTQTDPLPRLTNHPPMKEE
LRVSGKQLEQLGADQRELLSQFDSLTKLCDDFLSKEKREDFEETAEPSTV
LEELRSEEAEMRSLMNFMAREGSAADKNKLLTQRNTAVIENLLNDCANIG
IRNGNAVVRGKSLVLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom