Ggra1538.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1538.t1
Unique NameGgra1538.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length499
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1538.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..131
NoneNo IPR availableCOILSCoilCoilcoord: 367..394
NoneNo IPR availableCOILSCoilCoilcoord: 237..299
NoneNo IPR availableCOILSCoilCoilcoord: 416..478
NoneNo IPR availableCOILSCoilCoilcoord: 150..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..498
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..498
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:404399..405895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1538.t1Ggra1538.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 404399..405895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1538.t1 ID=Ggra1538.t1|Name=Ggra1538.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=499bp
MKHPIANAVIPTIAAVVGVSAARFYYVEKIKSLKFESLKNLSFVKHDNVR
LTKIIQHRERELTKVSLALRESEQESCVLRRNCLNAKDQNDEMVQELQKI
RNEKTVFVEELRDAKEQNIVVAKELRDVKKQNIVVAKELRDVKKQNIVLV
KQLRDVKGQKNNAVKQLRDAEDQNVIAAKELRDVKEQNTNIAKKLRDARD
QKSIAAKELQDVQARNNIAVKQIRDVKKLNTIAVKALQDVEAQNANAAKE
FQVLKEQHFKAIKELQNTRNQVQRTEGKLKHVKEQLLNSNNRIRNLEWEK
EKRNNLRTRVLEKEKGEATQRARSAEKSKQGWKEEKNVWGGRNETLMKIA
EFRGEERKDTELEDARRATENEGNKRLESDMEALRTENMSLRTIIAMRSE
HAHAYVNAIRQLHDYLTDQNQEIATLKSRKAELVQMFREAQLYFARLQSE
LSQAREQSIRLVRKLEAINEENDKIQNAQNPHEGLLKQNPEGSDQWSF*
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